RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-222ENST00000475580 MT-CO2P00403 227 aa12.48□□□□□ -0.41
VPS8-222ENST00000475580 C8orf88P0DMB2 117 aa12.48□□□□□ -0.41
VPS8-222ENST00000475580 IGHV4-30-4P0DP06 118 aa12.48□□□□□ -0.41
VPS8-222ENST00000475580 FCGR2BP31994 310 aaPredicted RBP12.48□□□□□ -0.41
VPS8-222ENST00000475580 ERHP84090 104 aaKnown RBP12.48□□□□□ -0.41
VPS8-222ENST00000475580 TMEM268Q5VZI3 342 aa12.48□□□□□ -0.41
VPS8-222ENST00000475580 SGPP2Q8IWX5 399 aa12.48□□□□□ -0.41
VPS8-222ENST00000475580 SLC35G3Q8N808 338 aa12.48□□□□□ -0.41
VPS8-222ENST00000475580 UXS1Q8NBZ7 420 aa12.48□□□□□ -0.41
VPS8-222ENST00000475580 TMEM190Q8WZ59 177 aa12.48□□□□□ -0.41
VPS8-222ENST00000475580 GPR146Q96CH1 333 aa12.48□□□□□ -0.41
VPS8-222ENST00000475580 SCGB3A2Q96PL1 93 aa12.48□□□□□ -0.41
VPS8-222ENST00000475580 TECRQ9NZ01 308 aaKnown RBP12.48□□□□□ -0.41
VPS8-222ENST00000475580 IFNA17P01571 189 aa12.47□□□□□ -0.41
VPS8-222ENST00000475580 CTSGP08311 255 aa12.47□□□□□ -0.41
VPS8-222ENST00000475580 RNASE2P10153 161 aaKnown RBP12.47□□□□□ -0.41
VPS8-222ENST00000475580 FAUP35544 74 aaKnown RBP12.47□□□□□ -0.41
VPS8-222ENST00000475580 AP3S2P59780 193 aa12.47□□□□□ -0.41
VPS8-222ENST00000475580 Q56UQ5 140 aa12.47□□□□□ -0.41
VPS8-222ENST00000475580 SPSB3Q6PJ21 355 aa12.47□□□□□ -0.41
VPS8-222ENST00000475580 UBAC2Q8NBM4 344 aa12.47□□□□□ -0.41
VPS8-222ENST00000475580 RNASE11Q8TAA1 199 aaKnown RBP12.47□□□□□ -0.41
VPS8-222ENST00000475580 IL22RA2Q969J5 263 aa12.47□□□□□ -0.41
VPS8-222ENST00000475580 WDR89Q96FK6 387 aaPredicted RBP12.47□□□□□ -0.41
VPS8-222ENST00000475580 CACNG5Q9UF02 275 aa12.47□□□□□ -0.41
VPS8-222ENST00000475580 IGHV3-48P01763 117 aa12.46□□□□□ -0.41
VPS8-222ENST00000475580 AKR1C4P17516 323 aa12.46□□□□□ -0.41
VPS8-222ENST00000475580 HOXA1P49639 335 aaPredicted RBP12.46□□□□□ -0.41
VPS8-222ENST00000475580 ELLP55199 621 aaPredicted RBP12.46□□□□□ -0.41
VPS8-222ENST00000475580 BSXQ3C1V8 233 aa12.46□□□□□ -0.41
VPS8-222ENST00000475580 SPANXN2Q5MJ10 180 aa12.46□□□□□ -0.41
VPS8-222ENST00000475580 TMEM61Q8N0U2 210 aa12.46□□□□□ -0.41
VPS8-222ENST00000475580 OR52E5Q8NH55 327 aa12.46□□□□□ -0.41
VPS8-222ENST00000475580 SDHCQ99643 169 aaPredicted RBP12.46□□□□□ -0.41
VPS8-222ENST00000475580 PDCD10Q9BUL8 212 aa12.46□□□□□ -0.41
VPS8-222ENST00000475580 PALMDQ9NP74 551 aa12.46□□□□□ -0.41
VPS8-222ENST00000475580 KCNIP3Q9Y2W7 256 aa12.46□□□□□ -0.41
VPS8-222ENST00000475580 UFC1Q9Y3C8 167 aa12.46□□□□□ -0.41
VPS8-222ENST00000475580 U3KQK5 164 aa12.46□□□□□ -0.41
VPS8-222ENST00000475580 NDUFA4O00483 81 aa12.45□□□□□ -0.42
VPS8-222ENST00000475580 MFAP4P55083 255 aa12.45□□□□□ -0.42
VPS8-222ENST00000475580 SPCS3P61009 180 aa12.45□□□□□ -0.42
VPS8-222ENST00000475580 BAK1Q16611 211 aa12.45□□□□□ -0.42
VPS8-222ENST00000475580 ZNF57Q68EA5 555 aaPredicted RBP12.45□□□□□ -0.42
VPS8-222ENST00000475580 BTNL8Q6UX41 500 aa12.45□□□□□ -0.42
VPS8-222ENST00000475580 GTSCR1Q86UQ5 136 aa12.45□□□□□ -0.42
VPS8-222ENST00000475580 DEDD2Q8WXF8 326 aa12.45□□□□□ -0.42
VPS8-222ENST00000475580 MARC2Q969Z3 335 aa12.45□□□□□ -0.42
VPS8-222ENST00000475580 PINX1Q96BK5 328 aaKnown RBP12.45□□□□□ -0.42
VPS8-222ENST00000475580 TXN2Q99757 166 aa12.45□□□□□ -0.42
VPS8-222ENST00000475580 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.45□□□□□ -0.42
VPS8-222ENST00000475580 MRPL27Q9P0M9 148 aaKnown RBP12.45□□□□□ -0.42
VPS8-222ENST00000475580 IGHV3OR16-8A0A075B7F1 116 aa12.44□□□□□ -0.42
VPS8-222ENST00000475580 CD7P09564 240 aa12.44□□□□□ -0.42
VPS8-222ENST00000475580 SNCAP37840 140 aa12.44□□□□□ -0.42
VPS8-222ENST00000475580 NMSQ5H8A3 153 aa12.44□□□□□ -0.42
VPS8-222ENST00000475580 GAR1Q9NY12 217 aaKnown RBP12.44□□□□□ -0.42
VPS8-222ENST00000475580 A0A0B4J2A0 478 aa12.43□□□□□ -0.42
VPS8-222ENST00000475580 CD81P60033 236 aa12.43□□□□□ -0.42
VPS8-222ENST00000475580 GUCA2BQ16661 112 aa12.43□□□□□ -0.42
VPS8-222ENST00000475580 LYZL2Q7Z4W2 148 aa12.43□□□□□ -0.42
VPS8-222ENST00000475580 SLC25A21Q9BQT8 299 aaPredicted RBP12.43□□□□□ -0.42
VPS8-222ENST00000475580 NEURL2Q9BR09 285 aa12.43□□□□□ -0.42
VPS8-222ENST00000475580 FNDC4Q9H6D8 234 aaPredicted RBP12.43□□□□□ -0.42
VPS8-222ENST00000475580 DAZ1Q9NQZ3 744 aaKnown RBP12.43□□□□□ -0.42
VPS8-222ENST00000475580 NDUFA13Q9P0J0 144 aa12.43□□□□□ -0.42
VPS8-222ENST00000475580 MRPL36Q9P0J6 103 aaKnown RBP12.43□□□□□ -0.42
VPS8-222ENST00000475580 SHPKQ9UHJ6 478 aa12.43□□□□□ -0.42
VPS8-222ENST00000475580 STAB2Q8WWQ8 2551 aa12.42□□□□□ -0.42
VPS8-222ENST00000475580 K7EMT4 169 aa12.42□□□□□ -0.42
VPS8-222ENST00000475580 NUPL2O15504 423 aaKnown RBP12.42□□□□□ -0.42
VPS8-222ENST00000475580 TMED4Q7Z7H5 227 aa12.42□□□□□ -0.42
VPS8-222ENST00000475580 TMEM170AQ8WVE7 144 aa12.42□□□□□ -0.42
VPS8-222ENST00000475580 WWC2-AS2Q96NR7 200 aa12.42□□□□□ -0.42
VPS8-222ENST00000475580 TM2D3Q9BRN9 247 aa12.42□□□□□ -0.42
VPS8-222ENST00000475580 C20orf24Q9BUV8 137 aa12.42□□□□□ -0.42
VPS8-222ENST00000475580 WFDC10AQ9H1F0 79 aa12.42□□□□□ -0.42
VPS8-222ENST00000475580 ENY2Q9NPA8 101 aa12.42□□□□□ -0.42
VPS8-222ENST00000475580 TENM3Q9P273 2699 aa12.42□□□□□ -0.42
VPS8-222ENST00000475580 CORTO00230 105 aa12.41□□□□□ -0.42
VPS8-222ENST00000475580 ZNF207O43670 478 aaKnown RBP12.41□□□□□ -0.42
VPS8-222ENST00000475580 GNG7O60262 68 aa12.41□□□□□ -0.42
VPS8-222ENST00000475580 SCAF4O95104 1147 aaKnown RBP12.41□□□□□ -0.42
VPS8-222ENST00000475580 NXPH3O95157 252 aa12.41□□□□□ -0.42
VPS8-222ENST00000475580 SULT1A3P0DMM9 295 aa12.41□□□□□ -0.42
VPS8-222ENST00000475580 SULT1A4P0DMN0 295 aa12.41□□□□□ -0.42
VPS8-222ENST00000475580 SUB1P53999 127 aaKnown RBP eCLIP12.41□□□□□ -0.42
VPS8-222ENST00000475580 RELQ04864 619 aaPredicted RBP12.41□□□□□ -0.42
VPS8-222ENST00000475580 MLANAQ16655 118 aa12.41□□□□□ -0.42
VPS8-222ENST00000475580 ANKRD55Q3KP44 614 aa12.41□□□□□ -0.42
VPS8-222ENST00000475580 TMEM128Q5BJH2 165 aa12.41□□□□□ -0.42
VPS8-222ENST00000475580 LINC00322Q6ZN03 302 aaPredicted RBP12.41□□□□□ -0.42
VPS8-222ENST00000475580 LGI3Q8N145 548 aa12.41□□□□□ -0.42
VPS8-222ENST00000475580 OR10C1Q96KK4 312 aa12.41□□□□□ -0.42
VPS8-222ENST00000475580 TRAV25A0A0B4J276 109 aa12.4□□□□□ -0.42
VPS8-222ENST00000475580 C15orf62A8K5M9 175 aa12.4□□□□□ -0.42
VPS8-222ENST00000475580 ANXA3P12429 323 aa12.4□□□□□ -0.42
VPS8-222ENST00000475580 HTR2BP41595 481 aa12.4□□□□□ -0.42
VPS8-222ENST00000475580 NPBWR1P48145 328 aa12.4□□□□□ -0.42
VPS8-222ENST00000475580 CCR6P51684 374 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms