RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 HINT2Q9BX68 163 aa12.25□□□□□ -0.45
CPSF3-203ENST00000475482 ZNF471Q9BX82 626 aaPredicted RBP12.25□□□□□ -0.45
CPSF3-203ENST00000475482 IGSF23A1L1A6 192 aa12.24□□□□□ -0.45
CPSF3-203ENST00000475482 PSMB11A5LHX3 300 aa12.24□□□□□ -0.45
CPSF3-203ENST00000475482 NCBP2LA6PVI3 153 aaKnown RBP12.24□□□□□ -0.45
CPSF3-203ENST00000475482 INS-IGF2F8WCM5 200 aa12.24□□□□□ -0.45
CPSF3-203ENST00000475482 H3BP45 60 aa12.24□□□□□ -0.45
CPSF3-203ENST00000475482 DFFBO76075 338 aa12.24□□□□□ -0.45
CPSF3-203ENST00000475482 IFNA10P01566 189 aa12.24□□□□□ -0.45
CPSF3-203ENST00000475482 IFNA7P01567 189 aa12.24□□□□□ -0.45
CPSF3-203ENST00000475482 HTR2BP41595 481 aa12.24□□□□□ -0.45
CPSF3-203ENST00000475482 SUB1P53999 127 aaKnown RBP eCLIP12.24□□□□□ -0.45
CPSF3-203ENST00000475482 ZNF266Q14584 549 aa12.24□□□□□ -0.45
CPSF3-203ENST00000475482 TNXAQ16473 311 aa12.24□□□□□ -0.45
CPSF3-203ENST00000475482 OXLD1Q5BKU9 147 aa12.24□□□□□ -0.45
CPSF3-203ENST00000475482 ZNF329Q86UD4 541 aa12.24□□□□□ -0.45
CPSF3-203ENST00000475482 PINX1Q96BK5 328 aaKnown RBP12.24□□□□□ -0.45
CPSF3-203ENST00000475482 NOL4LQ96MY1 436 aaPredicted RBP12.24□□□□□ -0.45
CPSF3-203ENST00000475482 SRSF8Q9BRL6 282 aaKnown RBP12.24□□□□□ -0.45
CPSF3-203ENST00000475482 FBXL15Q9H469 300 aa12.24□□□□□ -0.45
CPSF3-203ENST00000475482 NDUFA4L2Q9NRX3 87 aa12.24□□□□□ -0.45
CPSF3-203ENST00000475482 A0A1W2PRX2 142 aa12.23□□□□□ -0.45
CPSF3-203ENST00000475482 LINC01548A6NM66 108 aa12.23□□□□□ -0.45
CPSF3-203ENST00000475482 OR8U8P0C7N1 319 aa12.23□□□□□ -0.45
CPSF3-203ENST00000475482 TPT1P13693 172 aaKnown RBP12.23□□□□□ -0.45
CPSF3-203ENST00000475482 CNTFRP26992 372 aa12.23□□□□□ -0.45
CPSF3-203ENST00000475482 SNCAP37840 140 aa12.23□□□□□ -0.45
CPSF3-203ENST00000475482 RPL27AP46776 148 aaKnown RBP12.23□□□□□ -0.45
CPSF3-203ENST00000475482 ATP6V1FQ16864 119 aa12.23□□□□□ -0.45
CPSF3-203ENST00000475482 C5orf64Q2M2E5 130 aa12.23□□□□□ -0.45
CPSF3-203ENST00000475482 SPINK9Q5DT21 86 aa12.23□□□□□ -0.45
CPSF3-203ENST00000475482 EIF5AL1Q6IS14 154 aaKnown RBP12.23□□□□□ -0.45
CPSF3-203ENST00000475482 TMEM14EPQ6UXP3 125 aa12.23□□□□□ -0.45
CPSF3-203ENST00000475482 ZNF767PQ75MW2 155 aa12.23□□□□□ -0.45
CPSF3-203ENST00000475482 SLC35E3Q7Z769 313 aa12.23□□□□□ -0.45
CPSF3-203ENST00000475482 STPG2Q8N412 459 aa12.23□□□□□ -0.45
CPSF3-203ENST00000475482 COMMD1Q8N668 190 aa12.23□□□□□ -0.45
CPSF3-203ENST00000475482 OR10P1Q8NGE3 313 aa12.23□□□□□ -0.45
CPSF3-203ENST00000475482 FBXL17Q9UF56 701 aa12.23□□□□□ -0.45
CPSF3-203ENST00000475482 ZNF580Q9UK33 172 aa12.23□□□□□ -0.45
CPSF3-203ENST00000475482 PAIP2BQ9ULR5 123 aaKnown RBP12.23□□□□□ -0.45
CPSF3-203ENST00000475482 CST7O76096 145 aa12.22□□□□□ -0.45
CPSF3-203ENST00000475482 CNIH1O95406 144 aa12.22□□□□□ -0.45
CPSF3-203ENST00000475482 METTL15P1P0C7V9 234 aa12.22□□□□□ -0.45
CPSF3-203ENST00000475482 NHLH2Q02577 135 aa12.22□□□□□ -0.45
CPSF3-203ENST00000475482 TEX261Q6UWH6 196 aa12.22□□□□□ -0.45
CPSF3-203ENST00000475482 LILRB2Q8N423 598 aa12.22□□□□□ -0.45
CPSF3-203ENST00000475482 SLC24A4Q8NFF2 622 aa12.22□□□□□ -0.45
CPSF3-203ENST00000475482 STOML3Q8TAV4 291 aa12.22□□□□□ -0.45
CPSF3-203ENST00000475482 PHYHIPLQ96FC7 376 aa12.22□□□□□ -0.45
CPSF3-203ENST00000475482 RASL11BQ9BPW5 248 aa12.22□□□□□ -0.45
CPSF3-203ENST00000475482 AP4M1O00189 453 aa12.21□□□□□ -0.45
CPSF3-203ENST00000475482 PF4V1P10720 104 aa12.21□□□□□ -0.45
CPSF3-203ENST00000475482 NPY1RP25929 384 aa12.21□□□□□ -0.45
CPSF3-203ENST00000475482 GNB1P62873 340 aa12.21□□□□□ -0.45
CPSF3-203ENST00000475482 TMEM267Q0VDI3 215 aaPredicted RBP12.21□□□□□ -0.45
CPSF3-203ENST00000475482 ZNF562Q6V9R5 426 aa12.21□□□□□ -0.45
CPSF3-203ENST00000475482 ETV3LQ6ZN32 361 aa12.21□□□□□ -0.45
CPSF3-203ENST00000475482 REC114Q7Z4M0 266 aa12.21□□□□□ -0.45
CPSF3-203ENST00000475482 RNF152Q8N8N0 203 aa12.21□□□□□ -0.45
CPSF3-203ENST00000475482 OR5C1Q8NGR4 320 aa12.21□□□□□ -0.45
CPSF3-203ENST00000475482 RBMXL1Q96E39 390 aaKnown RBP12.21□□□□□ -0.45
CPSF3-203ENST00000475482 ATP5SQ99766 215 aa12.21□□□□□ -0.45
CPSF3-203ENST00000475482 TPSG1Q9NRR2 321 aa12.21□□□□□ -0.45
CPSF3-203ENST00000475482 RGS13O14921 159 aa12.2□□□□□ -0.46
CPSF3-203ENST00000475482 CA2P00918 260 aa12.2□□□□□ -0.46
CPSF3-203ENST00000475482 IFNA5P01569 189 aa12.2□□□□□ -0.46
CPSF3-203ENST00000475482 CD33P20138 364 aa12.2□□□□□ -0.46
CPSF3-203ENST00000475482 CFHR3Q02985 330 aa12.2□□□□□ -0.46
CPSF3-203ENST00000475482 PJVKQ0ZLH3 352 aa12.2□□□□□ -0.46
CPSF3-203ENST00000475482 BAP18Q8IXM2 172 aa12.2□□□□□ -0.46
CPSF3-203ENST00000475482 TMEM217Q8N7C4 229 aa12.2□□□□□ -0.46
CPSF3-203ENST00000475482 UBAC2Q8NBM4 344 aa12.2□□□□□ -0.46
CPSF3-203ENST00000475482 ST8SIA2Q92186 375 aa12.2□□□□□ -0.46
CPSF3-203ENST00000475482 OR4C12Q96R67 309 aa12.2□□□□□ -0.46
CPSF3-203ENST00000475482 GGACTQ9BVM4 153 aa12.2□□□□□ -0.46
CPSF3-203ENST00000475482 SMIM3Q9BZL3 60 aa12.2□□□□□ -0.46
CPSF3-203ENST00000475482 LINC00527Q9UJ94 153 aa12.2□□□□□ -0.46
CPSF3-203ENST00000475482 IFNA4P05014 189 aa12.19□□□□□ -0.46
CPSF3-203ENST00000475482 IGF1P05019 195 aa12.19□□□□□ -0.46
CPSF3-203ENST00000475482 IGLL1P15814 213 aa12.19□□□□□ -0.46
CPSF3-203ENST00000475482 SLC35B1P78383 322 aa12.19□□□□□ -0.46
CPSF3-203ENST00000475482 IFITM2Q01629 132 aa12.19□□□□□ -0.46
CPSF3-203ENST00000475482 SLC38A11Q08AI6 406 aa12.19□□□□□ -0.46
CPSF3-203ENST00000475482 CLINT1Q14677 625 aa12.19□□□□□ -0.46
CPSF3-203ENST00000475482 MRGPRG-AS1Q2M3A8 158 aa12.19□□□□□ -0.46
CPSF3-203ENST00000475482 C2orf83Q53S99 150 aa12.19□□□□□ -0.46
CPSF3-203ENST00000475482 OR8G2PQ6IF36 304 aa12.19□□□□□ -0.46
CPSF3-203ENST00000475482 SLC25A24Q6NUK1 477 aa12.19□□□□□ -0.46
CPSF3-203ENST00000475482 LINC00482Q8N8I6 264 aa12.19□□□□□ -0.46
CPSF3-203ENST00000475482 SRSF12Q8WXF0 261 aaKnown RBP12.19□□□□□ -0.46
CPSF3-203ENST00000475482 HSPB9Q9BQS6 159 aa12.19□□□□□ -0.46
CPSF3-203ENST00000475482 CYTL1Q9NRR1 136 aa12.19□□□□□ -0.46
CPSF3-203ENST00000475482 UBQLN2Q9UHD9 624 aa12.19□□□□□ -0.46
CPSF3-203ENST00000475482 C15orf62A8K5M9 175 aa12.18□□□□□ -0.46
CPSF3-203ENST00000475482 CYB5BO43169 146 aa12.18□□□□□ -0.46
CPSF3-203ENST00000475482 HLA-DRB1P01911 266 aa12.18□□□□□ -0.46
CPSF3-203ENST00000475482 PF4P02776 101 aa12.18□□□□□ -0.46
CPSF3-203ENST00000475482 PRB2P02812 416 aaPredicted RBP12.18□□□□□ -0.46
CPSF3-203ENST00000475482 OR13C7P0DN81 318 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms