RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 RIIAD1A6NNX1 92 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 SNURFLB1AK76 121 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 E9PLD3 99 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 C11orf98E9PRG8 122 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 NAPSAO96009 420 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 LGALS2P05162 132 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 ATP5G1P05496 136 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 OR5AL1P0C617 328 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 ZNF688P0C7X2 276 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 CBLN1P23435 193 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 PLA2G5P39877 138 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 ATP5G3P48201 142 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 CCL23P55773 120 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 SUPT4H1P63272 117 aaKnown RBP4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 ZNF90Q03938 601 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 LAMTOR4Q0VGL1 99 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 NMSQ5H8A3 153 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 STPG1Q5TH74 334 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 LCN12Q6JVE5 192 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 MORN3Q6PF18 240 aaPredicted RBP4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 SH2D6Q7Z4S9 175 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 TMEM86AQ8N2M4 240 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 LINC01555Q8NAE3 123 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 CLDN23Q96B33 292 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 KIR2DL4Q99706 377 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 ZNF665Q9H7R5 613 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 EDA2RQ9HAV5 297 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 TECRQ9NZ01 308 aaKnown RBP4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 CKLFQ9UBR5 152 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 PRO0461Q9UI25 63 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 KLF12Q9Y4X4 402 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 MYO10Q9HD67 2058 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 SMCHD1A6NHR9 2005 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 LTBP2Q14767 1821 aa4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 BAZ2BQ9UIF8 2168 aaKnown RBP4.89□□□□□ -1.63
ECHDC1-215ENST00000475319 ANK1P16157 1881 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 PLXNA1Q9UIW2 1896 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 TRBV20-1A0A075B6N2 111 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 MED19A0JLT2 244 aaPredicted RBP4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 UQCRQO14949 82 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 DUSP14O95147 198 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 APCSP02743 223 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 H2BFMP0C1H6 154 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 NKX2-1P43699 371 aaPredicted RBP4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 EFNB2P52799 333 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 SERF2P84101 59 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 SP4Q02446 784 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 KLF5Q13887 457 aaPredicted RBP4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 ZNF141Q15928 474 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 SLC35E4Q6ICL7 350 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 FAM166AQ6J272 317 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 EBLN2Q6P2I7 272 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 AMTNQ6UX39 209 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 ZNF841Q6ZN19 808 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 Q6ZS49 121 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 LINC00336Q6ZUF6 198 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 TCF23Q7RTU1 214 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 PRSS41Q7RTY9 318 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 TMEM86BQ8N661 226 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 ZNF645Q8N7E2 425 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 LRTM2Q8N967 370 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 SUMF1Q8NBK3 374 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 ZNF740Q8NDX6 193 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 GJC3Q8NFK1 279 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 OTOSQ8NHW6 89 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 FGF13Q92913 245 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 RAB37Q96AX2 223 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 ZNF501Q96CX3 271 aaPredicted RBP4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 ZC2HC1AQ96GY0 325 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 TXNDC17Q9BRA2 123 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 RCL1Q9Y2P8 373 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 MPC1Q9Y5U8 109 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 TDRD15B5MCY1 1934 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 MIA3Q5JRA6 1907 aa4.88□□□□□ -1.63
ECHDC1-215ENST00000475319 NCOR1O75376 2440 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 LOC730098B7Z3J9 87 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 F2Z2F3 143 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 MS4A18H0YCH9 400 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 NEURL1O76050 574 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 ZNF20P17024 532 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 NMUP48645 174 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 TAS2R45P59539 299 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 TAL2Q16559 108 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 SPRNQ5BIV9 151 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 DMRTC1Q5HYR2 192 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 FAM78AQ5JUQ0 283 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 C9orf153Q5TBE3 101 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 C1orf195Q5TG92 126 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 LYRM7Q5U5X0 104 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 LHFPL1Q86WI0 220 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 GAPTQ8N292 157 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 C10orf126Q8N4M7 172 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 C3orf22Q8N5N4 141 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 ZNF721Q8TF20 911 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 PDCD1LG2Q9BQ51 273 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 ULBP3Q9BZM4 244 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 LINC00597Q9H2U6 94 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 TP53TG1Q9Y2A0 90 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 TTC28Q96AY4 2481 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms