RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 LHFPL4Q7Z7J7 247 aa9.22□□□□□ -0.93
VAPB-204ENST00000475243 FAM19A2Q8N3H0 131 aa9.22□□□□□ -0.93
VAPB-204ENST00000475243 OR4X2Q8NGF9 303 aa9.22□□□□□ -0.93
VAPB-204ENST00000475243 PRELID3AQ96N28 172 aa9.22□□□□□ -0.93
VAPB-204ENST00000475243 NCOR1O75376 2440 aa9.22□□□□□ -0.93
VAPB-204ENST00000475243 PLXND1Q9Y4D7 1925 aa9.21□□□□□ -0.93
VAPB-204ENST00000475243 DPRXA6NFQ7 191 aa9.21□□□□□ -0.93
VAPB-204ENST00000475243 TDGF1P13385 188 aa9.21□□□□□ -0.93
VAPB-204ENST00000475243 LTBRP36941 435 aa9.21□□□□□ -0.93
VAPB-204ENST00000475243 TMEM105Q8N8V8 129 aa9.21□□□□□ -0.93
VAPB-204ENST00000475243 NUDT11Q96G61 164 aa9.21□□□□□ -0.93
VAPB-204ENST00000475243 RAMP3O60896 148 aa9.21□□□□□ -0.93
VAPB-204ENST00000475243 TMEM30BQ3MIR4 351 aa9.21□□□□□ -0.93
VAPB-204ENST00000475243 CTAG1AP78358 180 aa9.21□□□□□ -0.94
VAPB-204ENST00000475243 OSR1Q8TAX0 266 aaPredicted RBP9.21□□□□□ -0.94
VAPB-204ENST00000475243 HIST1H2BAQ96A08 127 aa9.21□□□□□ -0.94
VAPB-204ENST00000475243 C1QTNF5Q9BXJ0 243 aa9.21□□□□□ -0.94
VAPB-204ENST00000475243 LAIR2Q6ISS4 152 aa9.21□□□□□ -0.94
VAPB-204ENST00000475243 STHQ8IWL8 128 aa9.21□□□□□ -0.94
VAPB-204ENST00000475243 Q9H3A6 140 aa9.21□□□□□ -0.94
VAPB-204ENST00000475243 USF3Q68DE3 2245 aa9.21□□□□□ -0.94
VAPB-204ENST00000475243 NPIPB13A6NJU9 1138 aa9.21□□□□□ -0.94
VAPB-204ENST00000475243 RTBDNQ9BSG5 229 aaPredicted RBP9.21□□□□□ -0.94
VAPB-204ENST00000475243 MRPS16Q9Y3D3 137 aaKnown RBP9.21□□□□□ -0.94
VAPB-204ENST00000475243 TSPAN13O95857 204 aa9.2□□□□□ -0.94
VAPB-204ENST00000475243 SMIM13P0DJ93 91 aa9.2□□□□□ -0.94
VAPB-204ENST00000475243 SAA1P0DJI8 122 aaPredicted RBP9.2□□□□□ -0.94
VAPB-204ENST00000475243 GFI1BQ5VTD9 330 aa9.2□□□□□ -0.94
VAPB-204ENST00000475243 TM2D1Q9BX74 207 aa9.2□□□□□ -0.94
VAPB-204ENST00000475243 PLSCR2Q9NRY7 297 aa9.2□□□□□ -0.94
VAPB-204ENST00000475243 IFI6P09912 130 aa9.2□□□□□ -0.94
VAPB-204ENST00000475243 ZIC4Q8N9L1 334 aa9.2□□□□□ -0.94
VAPB-204ENST00000475243 AICDAQ9GZX7 198 aa9.2□□□□□ -0.94
VAPB-204ENST00000475243 CD7P09564 240 aa9.2□□□□□ -0.94
VAPB-204ENST00000475243 GNG5P63218 68 aa9.2□□□□□ -0.94
VAPB-204ENST00000475243 APOMO95445 188 aa9.2□□□□□ -0.94
VAPB-204ENST00000475243 DDTP30046 118 aa9.2□□□□□ -0.94
VAPB-204ENST00000475243 LDLRAD2Q5SZI1 272 aa9.2□□□□□ -0.94
VAPB-204ENST00000475243 TRBV9A0A0B4J1U6 114 aa9.2□□□□□ -0.94
VAPB-204ENST00000475243 PGPEP1Q9NXJ5 209 aa9.2□□□□□ -0.94
VAPB-204ENST00000475243 LINC00527Q9UJ94 153 aa9.2□□□□□ -0.94
VAPB-204ENST00000475243 HEATR5AQ86XA9 2040 aa9.2□□□□□ -0.94
VAPB-204ENST00000475243 VDAC2P45880 294 aaPredicted RBP9.2□□□□□ -0.94
VAPB-204ENST00000475243 SAA2-SAA4A0A096LPE2 208 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 SAA2P0DJI9 122 aaPredicted RBP9.19□□□□□ -0.94
VAPB-204ENST00000475243 NSUN5P1Q3KNT7 163 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 KIR3DL3Q8N743 410 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 RNASE7Q9H1E1 156 aaKnown RBP9.19□□□□□ -0.94
VAPB-204ENST00000475243 GP6Q9HCN6 339 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 A0A1B0GUT8 65 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 CDX1P47902 265 aaPredicted RBP9.19□□□□□ -0.94
VAPB-204ENST00000475243 C1orf162Q8NEQ5 155 aaPredicted RBP9.19□□□□□ -0.94
VAPB-204ENST00000475243 OR5AN1Q8NGI8 311 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 IMMP1LQ96LU5 166 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 MESP1Q9BRJ9 268 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 WDR81Q562E7 1941 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 OR11H12B2RN74 326 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 PPIFP30405 207 aaKnown RBP9.19□□□□□ -0.94
VAPB-204ENST00000475243 OR11H1Q8NG94 326 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 OR11H2Q8NH07 326 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 GGACTQ9BVM4 153 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 SDF2L1Q9HCN8 221 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 SOX21Q9Y651 276 aaPredicted RBP9.19□□□□□ -0.94
VAPB-204ENST00000475243 SIPA1L1O43166 1804 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 IFITM2Q01629 132 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 ALKBH7Q9BT30 221 aaPredicted RBP9.19□□□□□ -0.94
VAPB-204ENST00000475243 IL36BQ9NZH7 164 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 JKAMPQ9P055 326 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 H7C1H1 209 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 SPRR3Q9UBC9 169 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 A0A087WV48 116 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 HIGD1CA8MV81 97 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 FAM209BQ5JX69 171 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 VWCEQ96DN2 955 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 PSMG3Q9BT73 122 aaPredicted RBP9.19□□□□□ -0.94
VAPB-204ENST00000475243 DPH3P1Q9H4G8 78 aa9.19□□□□□ -0.94
VAPB-204ENST00000475243 IQCF6A8MYZ5 107 aa9.18□□□□□ -0.94
VAPB-204ENST00000475243 MALP21145 153 aa9.18□□□□□ -0.94
VAPB-204ENST00000475243 PAPPA-AS1Q5QFB9 102 aa9.18□□□□□ -0.94
VAPB-204ENST00000475243 PLPPR1Q8TBJ4 325 aa9.18□□□□□ -0.94
VAPB-204ENST00000475243 RNASE6Q93091 150 aaKnown RBP9.18□□□□□ -0.94
VAPB-204ENST00000475243 CD33P20138 364 aa9.18□□□□□ -0.94
VAPB-204ENST00000475243 CA7P43166 264 aa9.18□□□□□ -0.94
VAPB-204ENST00000475243 PQLC2LA1A4F0 135 aa9.18□□□□□ -0.94
VAPB-204ENST00000475243 C1QTNF9BB2RNN3 333 aa9.18□□□□□ -0.94
VAPB-204ENST00000475243 SFTA2Q6UW10 78 aa9.18□□□□□ -0.94
VAPB-204ENST00000475243 FER1L6-AS1Q8NA97 138 aa9.18□□□□□ -0.94
VAPB-204ENST00000475243 TYMSP04818 313 aa9.18□□□□□ -0.94
VAPB-204ENST00000475243 LINC00312Q9Y6C7 94 aa9.18□□□□□ -0.94
VAPB-204ENST00000475243 DEFB104AQ8WTQ1 72 aa9.18□□□□□ -0.94
VAPB-204ENST00000475243 FMC1Q96HJ9 113 aa9.18□□□□□ -0.94
VAPB-204ENST00000475243 EVI2AP22794 236 aa9.17□□□□□ -0.94
VAPB-204ENST00000475243 RTN4RL2Q86UN3 420 aa9.17□□□□□ -0.94
VAPB-204ENST00000475243 CD8AP01732 235 aa9.17□□□□□ -0.94
VAPB-204ENST00000475243 C3orf36Q3SXR2 165 aa9.17□□□□□ -0.94
VAPB-204ENST00000475243 TRBV7-9A0A0J9YWB2 115 aa9.17□□□□□ -0.94
VAPB-204ENST00000475243 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.17□□□□□ -0.94
VAPB-204ENST00000475243 TMEM250H0YL14 139 aa9.17□□□□□ -0.94
VAPB-204ENST00000475243 PINLYPA6NC86 204 aa9.17□□□□□ -0.94
VAPB-204ENST00000475243 NBR2O15453 112 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms