RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 IGHV3OR16-13A0A075B7E8 117 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 IGHV3-74A0A0B4J1X5 117 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 TRBV5-5A0A0J9YX44 114 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 IGLC7A0M8Q6 106 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 CBY3A6NI87 242 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 H3BMM0 161 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 RGS10O43665 173 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 FCGR3BO75015 233 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 CTSGP08311 255 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 UBBP0CG47 229 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 MT1HL1P0DM35 61 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 DEFB130BP0DP73 79 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 DEFB130AP0DP74 79 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 M6PRP20645 277 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 AP2S1P53680 142 aaPredicted RBP5.48□□□□□ -1.53
USP54-211ENST00000474929 TAS2R43P59537 309 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 KRTAP10-4P60372 401 aaPredicted RBP5.48□□□□□ -1.53
USP54-211ENST00000474929 SPHARQ15513 63 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 ACOT6Q3I5F7 207 aaPredicted RBP5.48□□□□□ -1.53
USP54-211ENST00000474929 Q499Y3 187 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 ACSM3Q53FZ2 586 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 YIF1BQ5BJH7 314 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 SLC25A24Q6NUK1 477 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 OR4A4PQ8NGN8 299 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 OR10J6PQ8NGY7 276 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 SCARB1Q8WTV0 552 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 PGLYRP3Q96LB9 341 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 CLUHP3Q96NS8 147 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 MND1Q9BWT6 205 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 COMMD5Q9GZQ3 224 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 NXF2Q9GZY0 626 aaKnown RBP5.48□□□□□ -1.53
USP54-211ENST00000474929 Q9H521 79 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 DUSP21Q9H596 190 aa5.48□□□□□ -1.53
USP54-211ENST00000474929 E7EUB6 86 aa5.47□□□□□ -1.53
USP54-211ENST00000474929 SCGB2A1O75556 95 aa5.47□□□□□ -1.53
USP54-211ENST00000474929 ADAP1O75689 374 aa5.47□□□□□ -1.53
USP54-211ENST00000474929 SLC22A5O76082 557 aa5.47□□□□□ -1.53
USP54-211ENST00000474929 IGFBP3P17936 291 aaPredicted RBP5.47□□□□□ -1.53
USP54-211ENST00000474929 B2MP61769 119 aa5.47□□□□□ -1.53
USP54-211ENST00000474929 C6orf201Q7Z4U5 140 aa5.47□□□□□ -1.53
USP54-211ENST00000474929 TPRA1Q86W33 373 aa5.47□□□□□ -1.53
USP54-211ENST00000474929 NKAIN3Q8N8D7 197 aa5.47□□□□□ -1.53
USP54-211ENST00000474929 OR10J5Q8NHC4 309 aa5.47□□□□□ -1.53
USP54-211ENST00000474929 DCANP1Q8TF63 244 aa5.47□□□□□ -1.53
USP54-211ENST00000474929 RBPMSQ93062 196 aaKnown RBP5.47□□□□□ -1.53
USP54-211ENST00000474929 DERL3Q96Q80 235 aa5.47□□□□□ -1.53
USP54-211ENST00000474929 FAAP24Q9BTP7 215 aa5.47□□□□□ -1.53
USP54-211ENST00000474929 TMEM208Q9BTX3 173 aa5.47□□□□□ -1.53
USP54-211ENST00000474929 QTRT1Q9BXR0 403 aaKnown RBP5.47□□□□□ -1.53
USP54-211ENST00000474929 PLEKHJ1Q9NW61 149 aa5.47□□□□□ -1.53
USP54-211ENST00000474929 BET1LQ9NYM9 111 aa5.47□□□□□ -1.53
USP54-211ENST00000474929 FAM30AQ9NZY2 134 aa5.47□□□□□ -1.53
USP54-211ENST00000474929 RAB26Q9ULW5 256 aa5.47□□□□□ -1.53
USP54-211ENST00000474929 SMIM31A0A1B0GVY4 71 aa5.46□□□□□ -1.54
USP54-211ENST00000474929 DENRO43583 198 aaKnown RBP5.46□□□□□ -1.54
USP54-211ENST00000474929 GNG7O60262 68 aa5.46□□□□□ -1.54
USP54-211ENST00000474929 CD1AP06126 327 aa5.46□□□□□ -1.54
USP54-211ENST00000474929 SERPINE2P07093 398 aa5.46□□□□□ -1.54
USP54-211ENST00000474929 TSPOP30536 169 aa5.46□□□□□ -1.54
USP54-211ENST00000474929 MFAP4P55083 255 aa5.46□□□□□ -1.54
USP54-211ENST00000474929 DHRS2Q13268 280 aa5.46□□□□□ -1.54
USP54-211ENST00000474929 SPATA31B1PQ5VZV4 182 aa5.46□□□□□ -1.54
USP54-211ENST00000474929 CMTM1Q8IZ96 169 aa5.46□□□□□ -1.54
USP54-211ENST00000474929 MS4A15Q8N5U1 240 aa5.46□□□□□ -1.54
USP54-211ENST00000474929 FCGR1BQ92637 280 aa5.46□□□□□ -1.54
USP54-211ENST00000474929 UFD1Q92890 307 aa5.46□□□□□ -1.54
USP54-211ENST00000474929 CABLES2Q9BTV7 478 aa5.46□□□□□ -1.54
USP54-211ENST00000474929 TMEM59Q9BXS4 323 aa5.46□□□□□ -1.54
USP54-211ENST00000474929 LSM2Q9Y333 95 aaKnown RBP5.46□□□□□ -1.54
USP54-211ENST00000474929 F11RQ9Y624 299 aaKnown RBP5.46□□□□□ -1.54
USP54-211ENST00000474929 TRDCB7Z8K6 153 aa5.45□□□□□ -1.54
USP54-211ENST00000474929 PSCAO43653 123 aa5.45□□□□□ -1.54
USP54-211ENST00000474929 IGLV2-8P01709 118 aa5.45□□□□□ -1.54
USP54-211ENST00000474929 NPPCP23582 126 aa5.45□□□□□ -1.54
USP54-211ENST00000474929 MAPK3P27361 379 aaPredicted RBP5.45□□□□□ -1.54
USP54-211ENST00000474929 NKX2-1P43699 371 aaPredicted RBP5.45□□□□□ -1.54
USP54-211ENST00000474929 P2RY1P47900 373 aa5.45□□□□□ -1.54
USP54-211ENST00000474929 RPS25P62851 125 aaKnown RBP5.45□□□□□ -1.54
USP54-211ENST00000474929 MRPS15P82914 257 aaKnown RBP5.45□□□□□ -1.54
USP54-211ENST00000474929 ESRGQ1W209 222 aa5.45□□□□□ -1.54
USP54-211ENST00000474929 HSD17B12Q53GQ0 312 aa5.45□□□□□ -1.54
USP54-211ENST00000474929 ZNF600Q6ZNG1 722 aa5.45□□□□□ -1.54
USP54-211ENST00000474929 Q6ZRU5 148 aa5.45□□□□□ -1.54
USP54-211ENST00000474929 PRSS48Q7RTY5 328 aa5.45□□□□□ -1.54
USP54-211ENST00000474929 Q8N814 137 aa5.45□□□□□ -1.54
USP54-211ENST00000474929 OR4B1Q8NGF8 309 aa5.45□□□□□ -1.54
USP54-211ENST00000474929 OR13F1Q8NGS4 319 aa5.45□□□□□ -1.54
USP54-211ENST00000474929 LSM10Q969L4 123 aaKnown RBP5.45□□□□□ -1.54
USP54-211ENST00000474929 UHRF2Q96PU4 802 aa5.45□□□□□ -1.54
USP54-211ENST00000474929 METTL26Q96S19 204 aa5.45□□□□□ -1.54
USP54-211ENST00000474929 MGLLQ99685 303 aa5.45□□□□□ -1.54
USP54-211ENST00000474929 HSD17B10Q99714 261 aaKnown RBP5.45□□□□□ -1.54
USP54-211ENST00000474929 GINS4Q9BRT9 223 aa5.45□□□□□ -1.54
USP54-211ENST00000474929 MSRB1Q9NZV6 116 aa5.45□□□□□ -1.54
USP54-211ENST00000474929 TRAV5A0A0B4J249 113 aa5.44□□□□□ -1.54
USP54-211ENST00000474929 K7EIM0 57 aa5.44□□□□□ -1.54
USP54-211ENST00000474929 BET1O15155 118 aa5.44□□□□□ -1.54
USP54-211ENST00000474929 FABP7O15540 132 aa5.44□□□□□ -1.54
USP54-211ENST00000474929 OR13C7P0DN81 318 aa5.44□□□□□ -1.54
USP54-211ENST00000474929 RPL37AP61513 92 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms