RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 PMP2P02689 132 aa10.11□□□□□ -0.79
EPCAM-205ENST00000474691 SNCAP37840 140 aa10.11□□□□□ -0.79
EPCAM-205ENST00000474691 RFX2P48378 723 aa10.11□□□□□ -0.79
EPCAM-205ENST00000474691 TAS2R46P59540 309 aa10.11□□□□□ -0.79
EPCAM-205ENST00000474691 TSPAN5P62079 268 aa10.11□□□□□ -0.79
EPCAM-205ENST00000474691 LPCAT3Q6P1A2 487 aa10.11□□□□□ -0.79
EPCAM-205ENST00000474691 LINC00336Q6ZUF6 198 aa10.11□□□□□ -0.79
EPCAM-205ENST00000474691 OR6F1Q8NGZ6 308 aa10.11□□□□□ -0.79
EPCAM-205ENST00000474691 OR10C1Q96KK4 312 aa10.11□□□□□ -0.79
EPCAM-205ENST00000474691 NXF2Q9GZY0 626 aaKnown RBP10.11□□□□□ -0.79
EPCAM-205ENST00000474691 MS4A6AQ9H2W1 248 aa10.11□□□□□ -0.79
EPCAM-205ENST00000474691 IGHV3-66A0A0C4DH42 116 aa10.1□□□□□ -0.79
EPCAM-205ENST00000474691 F8W735 103 aaPredicted RBP10.1□□□□□ -0.79
EPCAM-205ENST00000474691 IGHV3-48P01763 117 aa10.1□□□□□ -0.79
EPCAM-205ENST00000474691 DHRS11Q6UWP2 260 aa10.1□□□□□ -0.79
EPCAM-205ENST00000474691 PDCD10Q9BUL8 212 aa10.1□□□□□ -0.79
EPCAM-205ENST00000474691 RAB26Q9ULW5 256 aa10.1□□□□□ -0.79
EPCAM-205ENST00000474691 APLNQ9ULZ1 77 aa10.1□□□□□ -0.79
EPCAM-205ENST00000474691 CLEC2LP0C7M8 214 aa10.09□□□□□ -0.79
EPCAM-205ENST00000474691 MIFP14174 115 aa10.09□□□□□ -0.79
EPCAM-205ENST00000474691 NPPCP23582 126 aa10.09□□□□□ -0.79
EPCAM-205ENST00000474691 HLA-DMBP28068 263 aa10.09□□□□□ -0.79
EPCAM-205ENST00000474691 EIF2B2P49770 351 aaKnown RBP10.09□□□□□ -0.79
EPCAM-205ENST00000474691 SUB1P53999 127 aaKnown RBP eCLIP10.09□□□□□ -0.791e-8■■■■□ 22.5
EPCAM-205ENST00000474691 TMEM69Q5SWH9 247 aa10.09□□□□□ -0.79
EPCAM-205ENST00000474691 MORN3Q6PF18 240 aaPredicted RBP10.09□□□□□ -0.79
EPCAM-205ENST00000474691 ZNF600Q6ZNG1 722 aa10.09□□□□□ -0.79
EPCAM-205ENST00000474691 SPARTQ8N0X7 666 aa10.09□□□□□ -0.79
EPCAM-205ENST00000474691 CADM3Q8N126 398 aa10.09□□□□□ -0.79
EPCAM-205ENST00000474691 STXBP6Q8NFX7 210 aa10.09□□□□□ -0.79
EPCAM-205ENST00000474691 ST8SIA2Q92186 375 aa10.09□□□□□ -0.79
EPCAM-205ENST00000474691 SLC25A38Q96DW6 304 aa10.09□□□□□ -0.79
EPCAM-205ENST00000474691 HRH4Q9H3N8 390 aa10.09□□□□□ -0.79
EPCAM-205ENST00000474691 Q9H521 79 aa10.09□□□□□ -0.79
EPCAM-205ENST00000474691 TMEM14BQ9NUH8 114 aa10.09□□□□□ -0.79
EPCAM-205ENST00000474691 TRAV2A0A0B4J234 112 aa10.08□□□□□ -0.8
EPCAM-205ENST00000474691 I3L2K1 104 aa10.08□□□□□ -0.8
EPCAM-205ENST00000474691 TMEM127O75204 238 aa10.08□□□□□ -0.8
EPCAM-205ENST00000474691 SPP1P10451 314 aa10.08□□□□□ -0.8
EPCAM-205ENST00000474691 PHLDA2Q53GA4 152 aa10.08□□□□□ -0.8
EPCAM-205ENST00000474691 FAM90A2PQ658T7 463 aa10.08□□□□□ -0.8
EPCAM-205ENST00000474691 TOMM20LQ6UXN7 152 aa10.08□□□□□ -0.8
EPCAM-205ENST00000474691 CROCCP3Q8IVE0 287 aa10.08□□□□□ -0.8
EPCAM-205ENST00000474691 SLC35G3Q8N808 338 aa10.08□□□□□ -0.8
EPCAM-205ENST00000474691 TMEM230Q96A57 120 aa10.08□□□□□ -0.8
EPCAM-205ENST00000474691 GRAMD2BQ96HH9 432 aa10.08□□□□□ -0.8
EPCAM-205ENST00000474691 METTL26Q96S19 204 aa10.08□□□□□ -0.8
EPCAM-205ENST00000474691 ENY2Q9NPA8 101 aa10.08□□□□□ -0.8
EPCAM-205ENST00000474691 PUS1Q9Y606 427 aaKnown RBP eCLIP10.08□□□□□ -0.8
EPCAM-205ENST00000474691 IGHV4-4A0A075B6R2 117 aa10.07□□□□□ -0.8
EPCAM-205ENST00000474691 IGHV4-28A0A0C4DH34 117 aa10.07□□□□□ -0.8
EPCAM-205ENST00000474691 NPY1RP25929 384 aa10.07□□□□□ -0.8
EPCAM-205ENST00000474691 HSPE1P61604 102 aaKnown RBP10.07□□□□□ -0.8
EPCAM-205ENST00000474691 PRCDQ00LT1 54 aa10.07□□□□□ -0.8
EPCAM-205ENST00000474691 PVRIGQ6DKI7 326 aa10.07□□□□□ -0.8
EPCAM-205ENST00000474691 CORTO00230 105 aa10.06□□□□□ -0.8
EPCAM-205ENST00000474691 ATG12O94817 140 aa10.06□□□□□ -0.8
EPCAM-205ENST00000474691 IFNA17P01571 189 aa10.06□□□□□ -0.8
EPCAM-205ENST00000474691 PRSS3P35030 304 aa10.06□□□□□ -0.8
EPCAM-205ENST00000474691 NUTF2P61970 127 aaKnown RBP10.06□□□□□ -0.8
EPCAM-205ENST00000474691 UBE2NLQ5JXB2 153 aa10.06□□□□□ -0.8
EPCAM-205ENST00000474691 TBC1D26Q86UD7 250 aa10.06□□□□□ -0.8
EPCAM-205ENST00000474691 ZNF114Q8NC26 417 aa10.06□□□□□ -0.8
EPCAM-205ENST00000474691 VSIRQ9H7M9 311 aa10.06□□□□□ -0.8
EPCAM-205ENST00000474691 FAM212BQ9NTI7 297 aaPredicted RBP10.06□□□□□ -0.8
EPCAM-205ENST00000474691 TBC1D24Q9ULP9 559 aa10.06□□□□□ -0.8
EPCAM-205ENST00000474691 SMIM31A0A1B0GVY4 71 aa10.05□□□□□ -0.8
EPCAM-205ENST00000474691 DBX1A6NMT0 343 aa10.05□□□□□ -0.8
EPCAM-205ENST00000474691 APOHP02749 345 aaPredicted RBP10.05□□□□□ -0.8
EPCAM-205ENST00000474691 P0DMU3 169 aa10.05□□□□□ -0.8
EPCAM-205ENST00000474691 FAM231AP0DMU4 169 aa10.05□□□□□ -0.8
EPCAM-205ENST00000474691 FAM231CP0DMU5 169 aa10.05□□□□□ -0.8
EPCAM-205ENST00000474691 HLA-DMAP28067 261 aa10.05□□□□□ -0.8
EPCAM-205ENST00000474691 HRH1P35367 487 aa10.05□□□□□ -0.8
EPCAM-205ENST00000474691 ACTL10Q5JWF8 245 aa10.05□□□□□ -0.8
EPCAM-205ENST00000474691 Q6ZTC4 211 aa10.05□□□□□ -0.8
EPCAM-205ENST00000474691 Q8NAQ8 132 aa10.05□□□□□ -0.8
EPCAM-205ENST00000474691 ZNF414Q96IQ9 312 aa10.05□□□□□ -0.8
EPCAM-205ENST00000474691 RNF126Q9BV68 326 aa10.05□□□□□ -0.8
EPCAM-205ENST00000474691 FXYD6Q9H0Q3 95 aa10.05□□□□□ -0.8
EPCAM-205ENST00000474691 RNF167Q9H6Y7 350 aa10.05□□□□□ -0.8
EPCAM-205ENST00000474691 DEFB131BA0A096LNP1 70 aa10.04□□□□□ -0.8
EPCAM-205ENST00000474691 TMEM50AO95807 157 aa10.04□□□□□ -0.8
EPCAM-205ENST00000474691 ZNF688P0C7X2 276 aa10.04□□□□□ -0.8
EPCAM-205ENST00000474691 PGAM2P15259 253 aa10.04□□□□□ -0.8
EPCAM-205ENST00000474691 OPRK1P41145 380 aa10.04□□□□□ -0.8
EPCAM-205ENST00000474691 HOXA1P49639 335 aaPredicted RBP10.04□□□□□ -0.8
EPCAM-205ENST00000474691 AKR1C2P52895 323 aa10.04□□□□□ -0.8
EPCAM-205ENST00000474691 TAS2R20P59543 309 aa10.04□□□□□ -0.8
EPCAM-205ENST00000474691 SPINK9Q5DT21 86 aa10.04□□□□□ -0.8
EPCAM-205ENST00000474691 SAMD12Q8N8I0 201 aa10.04□□□□□ -0.8
EPCAM-205ENST00000474691 RNASE11Q8TAA1 199 aaKnown RBP10.04□□□□□ -0.8
EPCAM-205ENST00000474691 MRGPRFQ96AM1 343 aa10.04□□□□□ -0.8
EPCAM-205ENST00000474691 SEC22AQ96IW7 307 aa10.04□□□□□ -0.8
EPCAM-205ENST00000474691 NDUFAF3Q9BU61 184 aa10.04□□□□□ -0.8
EPCAM-205ENST00000474691 C1QTNF4Q9BXJ3 329 aa10.04□□□□□ -0.8
EPCAM-205ENST00000474691 YTHDF1Q9BYJ9 559 aaKnown RBP10.04□□□□□ -0.8
EPCAM-205ENST00000474691 PRSS29PA6NIE9 313 aa10.03□□□□□ -0.8
EPCAM-205ENST00000474691 KNCNA6PVL3 124 aa10.03□□□□□ -0.8
EPCAM-205ENST00000474691 IFNA21P01568 189 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms