RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 DLK1P80370 383 aa16.08■□□□□ 0.17
CDHR3-210ENST00000474330 GINS3Q9BRX5 216 aa16.08■□□□□ 0.17
CDHR3-210ENST00000474330 BTBD17A6NE02 478 aa16.08■□□□□ 0.16
CDHR3-210ENST00000474330 IFNA5P01569 189 aa16.08■□□□□ 0.16
CDHR3-210ENST00000474330 EGR2P11161 476 aaPredicted RBP16.08■□□□□ 0.16
CDHR3-210ENST00000474330 CTRB1P17538 263 aa16.08■□□□□ 0.16
CDHR3-210ENST00000474330 SRD5A1P18405 259 aa16.08■□□□□ 0.16
CDHR3-210ENST00000474330 CTRB2Q6GPI1 263 aa16.08■□□□□ 0.16
CDHR3-210ENST00000474330 ALKAL2Q6UX46 152 aa16.08■□□□□ 0.16
CDHR3-210ENST00000474330 OR1P1Q8NH06 330 aa16.08■□□□□ 0.16
CDHR3-210ENST00000474330 RNASEH2CQ8TDP1 164 aaKnown RBP16.08■□□□□ 0.16
CDHR3-210ENST00000474330 PARD6GQ9BYG4 376 aaPredicted RBP16.08■□□□□ 0.16
CDHR3-210ENST00000474330 UQCC1Q9NVA1 299 aa16.08■□□□□ 0.16
CDHR3-210ENST00000474330 FBXO7Q9Y3I1 522 aa16.08■□□□□ 0.16
CDHR3-210ENST00000474330 F11RQ9Y624 299 aaKnown RBP16.08■□□□□ 0.16
CDHR3-210ENST00000474330 ASPHD1Q5U4P2 390 aa16.07■□□□□ 0.16
CDHR3-210ENST00000474330 SGMS2Q8NHU3 365 aa16.07■□□□□ 0.16
CDHR3-210ENST00000474330 SCARB1Q8WTV0 552 aa16.07■□□□□ 0.16
CDHR3-210ENST00000474330 UBQLN2Q9UHD9 624 aa16.07■□□□□ 0.16
CDHR3-210ENST00000474330 CRYGCP07315 174 aa16.06■□□□□ 0.16
CDHR3-210ENST00000474330 EIF5AL1Q6IS14 154 aaKnown RBP16.06■□□□□ 0.16
CDHR3-210ENST00000474330 SH2D7A6NKC9 451 aaPredicted RBP16.05■□□□□ 0.16
CDHR3-210ENST00000474330 NPIPB5A8MRT5 1133 aa16.05■□□□□ 0.16
CDHR3-210ENST00000474330 FNDC10F2Z333 226 aa16.05■□□□□ 0.16
CDHR3-210ENST00000474330 CD69Q07108 199 aa16.05■□□□□ 0.16
CDHR3-210ENST00000474330 SLC25A24Q6NUK1 477 aa16.05■□□□□ 0.16
CDHR3-210ENST00000474330 TTC9CQ8N5M4 171 aa16.05■□□□□ 0.16
CDHR3-210ENST00000474330 HSD17B11Q8NBQ5 300 aa16.05■□□□□ 0.16
CDHR3-210ENST00000474330 LFNGQ8NES3 379 aa16.05■□□□□ 0.16
CDHR3-210ENST00000474330 WDR61Q9GZS3 305 aaKnown RBP16.05■□□□□ 0.16
CDHR3-210ENST00000474330 WNT10AQ9GZT5 417 aa16.05■□□□□ 0.16
CDHR3-210ENST00000474330 VPREB3Q9UKI3 123 aa16.05■□□□□ 0.16
CDHR3-210ENST00000474330 UBE2L5PA0A1B0GUS4 154 aa16.05■□□□□ 0.16
CDHR3-210ENST00000474330 CORTO00230 105 aa16.05■□□□□ 0.16
CDHR3-210ENST00000474330 ATP6V0E1O15342 81 aa16.05■□□□□ 0.16
CDHR3-210ENST00000474330 SPP1P10451 314 aa16.05■□□□□ 0.16
CDHR3-210ENST00000474330 MDKP21741 143 aaPredicted RBP16.05■□□□□ 0.16
CDHR3-210ENST00000474330 GPX4P36969 197 aaPredicted RBP16.05■□□□□ 0.16
CDHR3-210ENST00000474330 MFAP2P55001 183 aa16.05■□□□□ 0.16
CDHR3-210ENST00000474330 OR1L6Q8NGR2 347 aa16.05■□□□□ 0.16
CDHR3-210ENST00000474330 SCGB1C1Q8TD33 95 aa16.05■□□□□ 0.16
CDHR3-210ENST00000474330 CACNG8Q8WXS5 425 aa16.05■□□□□ 0.16
CDHR3-210ENST00000474330 TMEM68Q96MH6 324 aa16.05■□□□□ 0.16
CDHR3-210ENST00000474330 PARP11Q9NR21 331 aa16.05■□□□□ 0.16
CDHR3-210ENST00000474330 HOXA3O43365 443 aaPredicted RBP16.04■□□□□ 0.16
CDHR3-210ENST00000474330 FBXO24O75426 580 aa16.04■□□□□ 0.16
CDHR3-210ENST00000474330 SEC11BP0C7V7 166 aa16.04■□□□□ 0.16
CDHR3-210ENST00000474330 ATP6V0CP27449 155 aa16.04■□□□□ 0.16
CDHR3-210ENST00000474330 ARSJQ5FYB0 599 aaPredicted RBP16.04■□□□□ 0.16
CDHR3-210ENST00000474330 SIGLECL1Q8N7X8 197 aa16.04■□□□□ 0.16
CDHR3-210ENST00000474330 TMED6Q8WW62 240 aa16.04■□□□□ 0.16
CDHR3-210ENST00000474330 GNPNAT1Q96EK6 184 aaPredicted RBP16.04■□□□□ 0.16
CDHR3-210ENST00000474330 NPVFQ9HCQ7 196 aa16.04■□□□□ 0.16
CDHR3-210ENST00000474330 LINC01548A6NM66 108 aa16.03■□□□□ 0.16
CDHR3-210ENST00000474330 IGHG2P01859 326 aa16.03■□□□□ 0.16
CDHR3-210ENST00000474330 RBMS3Q6XE24 437 aaKnown RBP16.03■□□□□ 0.16
CDHR3-210ENST00000474330 C19orf35Q6ZS72 473 aa16.03■□□□□ 0.16
CDHR3-210ENST00000474330 TAF15Q92804 592 aaKnown RBP eCLIP16.03■□□□□ 0.16
CDHR3-210ENST00000474330 WDR83OSQ9Y284 106 aa16.03■□□□□ 0.16
CDHR3-210ENST00000474330 DMRT1Q9Y5R6 373 aa16.03■□□□□ 0.16
CDHR3-210ENST00000474330 DEFA4P12838 97 aa16.02■□□□□ 0.16
CDHR3-210ENST00000474330 CRIP2P52943 208 aaPredicted RBP16.02■□□□□ 0.16
CDHR3-210ENST00000474330 AKIRIN2Q53H80 203 aa16.02■□□□□ 0.16
CDHR3-210ENST00000474330 TREML4Q6UXN2 200 aa16.02■□□□□ 0.16
CDHR3-210ENST00000474330 SLC25A32Q9H2D1 315 aa16.02■□□□□ 0.16
CDHR3-210ENST00000474330 OPRK1P41145 380 aa16.01■□□□□ 0.15
CDHR3-210ENST00000474330 BLCAPP62952 87 aa16.01■□□□□ 0.15
CDHR3-210ENST00000474330 RUNX1Q01196 453 aa16.01■□□□□ 0.15
CDHR3-210ENST00000474330 MLANAQ16655 118 aa16.01■□□□□ 0.15
CDHR3-210ENST00000474330 TMEM86BQ8N661 226 aa16.01■□□□□ 0.15
CDHR3-210ENST00000474330 MISP3Q96FF7 219 aa16.01■□□□□ 0.15
CDHR3-210ENST00000474330 SH3BGRL3Q9H299 93 aa16.01■□□□□ 0.15
CDHR3-210ENST00000474330 FNDC4Q9H6D8 234 aaPredicted RBP16.01■□□□□ 0.15
CDHR3-210ENST00000474330 TNFRSF19Q9NS68 423 aa16.01■□□□□ 0.15
CDHR3-210ENST00000474330 SMCO3A2RU48 225 aa16.01■□□□□ 0.15
CDHR3-210ENST00000474330 TSPAN9O75954 239 aa16.01■□□□□ 0.15
CDHR3-210ENST00000474330 FGF7P21781 194 aa16.01■□□□□ 0.15
CDHR3-210ENST00000474330 GAMTQ14353 236 aa16.01■□□□□ 0.15
CDHR3-210ENST00000474330 C9orf152Q5JTZ5 239 aa16.01■□□□□ 0.15
CDHR3-210ENST00000474330 ETFRF1Q6IPR1 90 aa16.01■□□□□ 0.15
CDHR3-210ENST00000474330 UNQ5815/PRO19632Q6UWF5 114 aa16.01■□□□□ 0.15
CDHR3-210ENST00000474330 SLC16A13Q7RTY0 426 aa16.01■□□□□ 0.15
CDHR3-210ENST00000474330 MPDU1O75352 247 aa16■□□□□ 0.15
CDHR3-210ENST00000474330 IGF1P05019 195 aa16■□□□□ 0.15
CDHR3-210ENST00000474330 SRSF2Q01130 221 aaKnown RBP16■□□□□ 0.15
CDHR3-210ENST00000474330 FAM74A1Q5RGS3 127 aa16■□□□□ 0.15
CDHR3-210ENST00000474330 BTNL8Q6UX41 500 aa16■□□□□ 0.15
CDHR3-210ENST00000474330 SLC35E3Q7Z769 313 aa16■□□□□ 0.15
CDHR3-210ENST00000474330 CENPVQ7Z7K6 275 aaPredicted RBP16■□□□□ 0.15
CDHR3-210ENST00000474330 FAM110DQ8TAY7 271 aaPredicted RBP16■□□□□ 0.15
CDHR3-210ENST00000474330 PSMG3Q9BT73 122 aaPredicted RBP16■□□□□ 0.15
CDHR3-210ENST00000474330 LSM4Q9Y4Z0 139 aaKnown RBP16■□□□□ 0.15
CDHR3-210ENST00000474330 RPS10-NUDT3A0A1W2PQS6 291 aa15.99■□□□□ 0.15
CDHR3-210ENST00000474330 CYB5BO43169 146 aa15.99■□□□□ 0.15
CDHR3-210ENST00000474330 ECSCRQ19T08 205 aa15.99■□□□□ 0.15
CDHR3-210ENST00000474330 TMEM144Q7Z5S9 345 aa15.99■□□□□ 0.15
CDHR3-210ENST00000474330 OR5T1Q8NG75 326 aa15.99■□□□□ 0.15
CDHR3-210ENST00000474330 SLC35E1Q96K37 410 aa15.99■□□□□ 0.15
CDHR3-210ENST00000474330 FANCD2OSQ96PS1 177 aa15.99■□□□□ 0.15
CDHR3-210ENST00000474330 RSG1Q9BU20 258 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms