RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-211ENST00000472673 LRRN3E7EW58 273 aa0.29□□□□□ -2.36
COMMD3-211ENST00000472673 OR2T1O43869 369 aa0.29□□□□□ -2.36
COMMD3-211ENST00000472673 OR1I1O60431 355 aa0.29□□□□□ -2.36
COMMD3-211ENST00000472673 OCM2P0CE71 109 aa0.29□□□□□ -2.36
COMMD3-211ENST00000472673 HIST1H2BOP23527 126 aa0.29□□□□□ -2.36
COMMD3-211ENST00000472673 HIST1H2BBP33778 126 aa0.29□□□□□ -2.36
COMMD3-211ENST00000472673 SSR2P43308 183 aa0.29□□□□□ -2.36
COMMD3-211ENST00000472673 HIST1H2BDP58876 126 aa0.29□□□□□ -2.36
COMMD3-211ENST00000472673 RAB4BP61018 213 aa0.29□□□□□ -2.36
COMMD3-211ENST00000472673 HIST1H2BCP62807 126 aa0.29□□□□□ -2.36
COMMD3-211ENST00000472673 HBA1P69905 142 aa0.29□□□□□ -2.36
COMMD3-211ENST00000472673 PMAIP1Q13794 54 aa0.29□□□□□ -2.36
COMMD3-211ENST00000472673 HIST2H2BEQ16778 126 aa0.29□□□□□ -2.36
COMMD3-211ENST00000472673 KHDC3LQ587J8 217 aa0.29□□□□□ -2.36
COMMD3-211ENST00000472673 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.29□□□□□ -2.36
COMMD3-211ENST00000472673 DPPA3Q6W0C5 159 aa0.29□□□□□ -2.36
COMMD3-211ENST00000472673 Q8N814 137 aa0.29□□□□□ -2.36
COMMD3-211ENST00000472673 GPR32P1Q8NGA4 272 aa0.29□□□□□ -2.36
COMMD3-211ENST00000472673 HIST1H2BHQ93079 126 aa0.29□□□□□ -2.36
COMMD3-211ENST00000472673 HIST1H2BNQ99877 126 aa0.29□□□□□ -2.36
COMMD3-211ENST00000472673 HIST1H2BMQ99879 126 aa0.29□□□□□ -2.36
COMMD3-211ENST00000472673 TMEM147Q9BVK8 224 aa0.29□□□□□ -2.36
COMMD3-211ENST00000472673 FRAS1Q86XX4 4008 aa0.29□□□□□ -2.36
COMMD3-211ENST00000472673 MED12Q93074 2177 aa0.29□□□□□ -2.36
COMMD3-211ENST00000472673 MAST4O15021 2626 aa0.28□□□□□ -2.36
COMMD3-211ENST00000472673 TRBV6-8A0A0A6YYG3 113 aa0.28□□□□□ -2.36
COMMD3-211ENST00000472673 TGIF2-C20orf24A0A0A6YYL0 155 aa0.28□□□□□ -2.36
COMMD3-211ENST00000472673 EEF1E1-BLOC1S5C9J1V9 151 aa0.28□□□□□ -2.36
COMMD3-211ENST00000472673 SLC16A4O15374 487 aa0.28□□□□□ -2.36
COMMD3-211ENST00000472673 HYPMO75409 117 aa0.28□□□□□ -2.36
COMMD3-211ENST00000472673 MGST1P10620 155 aaKnown RBP0.28□□□□□ -2.36
COMMD3-211ENST00000472673 CNBPP62633 177 aaKnown RBP0.28□□□□□ -2.36
COMMD3-211ENST00000472673 IFITM2Q01629 132 aa0.28□□□□□ -2.36
COMMD3-211ENST00000472673 PDE6HQ13956 83 aa0.28□□□□□ -2.36
COMMD3-211ENST00000472673 SPANXN3Q5MJ09 141 aa0.28□□□□□ -2.36
COMMD3-211ENST00000472673 OGFRL1Q5TC84 451 aaPredicted RBP0.28□□□□□ -2.36
COMMD3-211ENST00000472673 HIST2H3PS2Q5TEC6 136 aa0.28□□□□□ -2.36
COMMD3-211ENST00000472673 RPL22L1Q6P5R6 122 aaKnown RBP0.28□□□□□ -2.36
COMMD3-211ENST00000472673 CD200R1LQ6Q8B3 271 aa0.28□□□□□ -2.36
COMMD3-211ENST00000472673 Q6ZS49 121 aa0.28□□□□□ -2.36
COMMD3-211ENST00000472673 Q8N6K4 173 aa0.28□□□□□ -2.36
COMMD3-211ENST00000472673 OR4E2Q8NGC2 313 aa0.28□□□□□ -2.36
COMMD3-211ENST00000472673 OR4D11Q8NGI4 311 aa0.28□□□□□ -2.36
COMMD3-211ENST00000472673 MRPL30Q8TCC3 161 aaKnown RBP0.28□□□□□ -2.36
COMMD3-211ENST00000472673 IMP4Q96G21 291 aaKnown RBP0.28□□□□□ -2.36
COMMD3-211ENST00000472673 ULBP3Q9BZM4 244 aa0.28□□□□□ -2.36
COMMD3-211ENST00000472673 ACER3Q9NUN7 267 aa0.28□□□□□ -2.36
COMMD3-211ENST00000472673 PKIGQ9Y2B9 76 aa0.28□□□□□ -2.36
COMMD3-211ENST00000472673 ATP6V1DQ9Y5K8 247 aa0.28□□□□□ -2.36
COMMD3-211ENST00000472673 CNTRLQ7Z7A1 2325 aa0.28□□□□□ -2.36
COMMD3-211ENST00000472673 SCN3AQ9NY46 2000 aa0.28□□□□□ -2.37
COMMD3-211ENST00000472673 MACF1Q9UPN3 7388 aaKnown RBP0.28□□□□□ -2.37
COMMD3-211ENST00000472673 KIF13BQ9NQT8 1826 aa0.27□□□□□ -2.37
COMMD3-211ENST00000472673 TRAV3A0A0B4J244 114 aa0.27□□□□□ -2.37
COMMD3-211ENST00000472673 PQLC2LA1A4F0 135 aa0.27□□□□□ -2.37
COMMD3-211ENST00000472673 TGOLN2O43493 480 aa0.27□□□□□ -2.37
COMMD3-211ENST00000472673 TNNC2P02585 160 aa0.27□□□□□ -2.37
COMMD3-211ENST00000472673 CASQ1P31415 396 aa0.27□□□□□ -2.37
COMMD3-211ENST00000472673 RAB5BP61020 215 aa0.27□□□□□ -2.37
COMMD3-211ENST00000472673 C8orf74Q6P047 294 aa0.27□□□□□ -2.37
COMMD3-211ENST00000472673 MIR17HGQ75NE6 70 aa0.27□□□□□ -2.37
COMMD3-211ENST00000472673 DEFB128Q7Z7B8 93 aa0.27□□□□□ -2.37
COMMD3-211ENST00000472673 SBSPONQ8IVN8 264 aa0.27□□□□□ -2.37
COMMD3-211ENST00000472673 TMEM86BQ8N661 226 aa0.27□□□□□ -2.37
COMMD3-211ENST00000472673 OR52R1Q8NGF1 315 aa0.27□□□□□ -2.37
COMMD3-211ENST00000472673 TERB2Q8NHR7 220 aa0.27□□□□□ -2.37
COMMD3-211ENST00000472673 ZNF418Q8TF45 676 aaPredicted RBP0.27□□□□□ -2.37
COMMD3-211ENST00000472673 SLC35B4Q969S0 331 aa0.27□□□□□ -2.37
COMMD3-211ENST00000472673 OPTNQ96CV9 577 aa0.27□□□□□ -2.37
COMMD3-211ENST00000472673 LINC00526Q96FQ7 95 aa0.27□□□□□ -2.37
COMMD3-211ENST00000472673 PPP1R2P1Q96PQ5 205 aa0.27□□□□□ -2.37
COMMD3-211ENST00000472673 C11orf68Q9H3H3 251 aaKnown RBP0.27□□□□□ -2.37
COMMD3-211ENST00000472673 FBXL12Q9NXK8 326 aa0.27□□□□□ -2.37
COMMD3-211ENST00000472673 USE1Q9NZ43 259 aa0.27□□□□□ -2.37
COMMD3-211ENST00000472673 HECW1Q76N89 1606 aa0.27□□□□□ -2.37
COMMD3-211ENST00000472673 DOCK5Q9H7D0 1870 aa0.27□□□□□ -2.37
COMMD3-211ENST00000472673 ZFC3H1O60293 1989 aaKnown RBP0.26□□□□□ -2.37
COMMD3-211ENST00000472673 A0A1B0GV50 99 aa0.26□□□□□ -2.37
COMMD3-211ENST00000472673 BUB1B-PAK6H3BSN5 160 aa0.26□□□□□ -2.37
COMMD3-211ENST00000472673 FAAHO00519 579 aa0.26□□□□□ -2.37
COMMD3-211ENST00000472673 UBL3O95164 117 aa0.26□□□□□ -2.37
COMMD3-211ENST00000472673 TPM3P06753 285 aa0.26□□□□□ -2.37
COMMD3-211ENST00000472673 MIFP14174 115 aa0.26□□□□□ -2.37
COMMD3-211ENST00000472673 ZNF25P17030 456 aaPredicted RBP0.26□□□□□ -2.37
COMMD3-211ENST00000472673 AP2S1P53680 142 aaPredicted RBP0.26□□□□□ -2.37
COMMD3-211ENST00000472673 RPS20P60866 119 aaKnown RBP0.26□□□□□ -2.37
COMMD3-211ENST00000472673 TPM4P67936 248 aa0.26□□□□□ -2.37
COMMD3-211ENST00000472673 RHEBQ15382 184 aa0.26□□□□□ -2.37
COMMD3-211ENST00000472673 CDKL4Q5MAI5 379 aa0.26□□□□□ -2.37
COMMD3-211ENST00000472673 SPANXN5Q5MJ07 72 aa0.26□□□□□ -2.37
COMMD3-211ENST00000472673 PHF13Q86YI8 300 aaPredicted RBP0.26□□□□□ -2.37
COMMD3-211ENST00000472673 OR13C4Q8NGS5 318 aa0.26□□□□□ -2.37
COMMD3-211ENST00000472673 H1FXQ92522 213 aaKnown RBP0.26□□□□□ -2.37
COMMD3-211ENST00000472673 PIK3R4Q99570 1358 aa0.26□□□□□ -2.37
COMMD3-211ENST00000472673 TOPBP1Q92547 1522 aa0.26□□□□□ -2.37
COMMD3-211ENST00000472673 NAV3Q8IVL0 2385 aa0.26□□□□□ -2.37
COMMD3-211ENST00000472673 DOCK3Q8IZD9 2030 aa0.25□□□□□ -2.37
COMMD3-211ENST00000472673 FAT4Q6V0I7 4981 aa0.25□□□□□ -2.37
COMMD3-211ENST00000472673 RIC1Q4ADV7 1423 aa0.25□□□□□ -2.37
COMMD3-211ENST00000472673 A0A0D9SG52 128 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms