RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 GGT3PA6NGU5 568 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 KNCNA6PVL3 124 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 A8MT66 165 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 GGTLC3B5MD39 225 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 G3V3Q6 166 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 UPK2O00526 184 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 NPFFO15130 113 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 MRPS14O60783 128 aaKnown RBP2.15□□□□□ -2.07
CD46-213ENST00000471987 HLA-DRB1P01911 266 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 CISD3P0C7P0 127 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 ZNF728P0DKX0 622 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 ERGP11308 486 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 CTLA4P16410 223 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 PRSS3P35030 304 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 ATP5G3P48201 142 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 RND2P52198 227 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 TPPP2P59282 170 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 DEFA1P59665 94 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 DEFA3P59666 94 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 FABP5Q01469 135 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 MYL5Q02045 173 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 SLC38A11Q08AI6 406 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 DHRS2Q13268 280 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 PEA15Q15121 130 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 PDGFRLQ15198 375 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 IQCJQ1A5X6 159 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 NSUN5P1Q3KNT7 163 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 PRR9Q5T870 116 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 Q5XG85 94 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 KDM4DQ6B0I6 523 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 Q6Q795 121 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 HRCT1Q6UXD1 115 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 ZNF720Q7Z2F6 126 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 TTC9CQ8N5M4 171 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 ANKRD29Q8N6D5 301 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 NPWQ8N729 165 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 OR2M3Q8NG83 312 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 SLC25A44Q96H78 314 aaPredicted RBP2.15□□□□□ -2.07
CD46-213ENST00000471987 S100A13Q99584 98 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 MIEN1Q9BRT3 115 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 GINS4Q9BRT9 223 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 GGTLC1Q9BX51 225 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 MRPL32Q9BYC8 188 aaKnown RBP2.15□□□□□ -2.07
CD46-213ENST00000471987 TMEM191AQ9H0A3 160 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 SLC25A31Q9H0C2 315 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 TUBA4BQ9H853 241 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 RPRMQ9NS64 109 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 CBLN4Q9NTU7 201 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 IER3IP1Q9Y5U9 82 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 MROH1Q8NDA8 1641 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 DOCK5Q9H7D0 1870 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 ABCC2Q92887 1545 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 SZT2Q5T011 3432 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 SPTBN5Q9NRC6 3674 aaKnown RBP2.15□□□□□ -2.07
CD46-213ENST00000471987 MYH7BA7E2Y1 1941 aa2.15□□□□□ -2.07
CD46-213ENST00000471987 PARP14Q460N5 1801 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 COL6A3P12111 3177 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 NRXN1Q9ULB1 1477 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 ARAP2Q8WZ64 1704 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 NHSL1Q5SYE7 1610 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 NUP210LQ5VU65 1888 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 A0A1B0GUL6 1792 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 IGKV1D-8A0A087WSZ0 117 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 IGHV1OR21-1A0A087WYE8 117 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 TRAV8-6A0A0B4J262 113 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 A0A0B4J2A0 478 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 TRDV1A0A1B0GX56 115 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 DHRS12A0PJE2 317 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 C7orf71A4D174 169 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 PGPA6NDG6 321 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 BBIP1A8MTZ0 92 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 ZNF670-ZNF695F2Z2N8 137 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 FNDC10F2Z333 226 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 LY6LH3BQJ8 138 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 H7BYZ3 331 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 J3QQQ9 107 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 PIRO00625 290 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 PDCD5O14737 125 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 MYL12BO14950 172 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 NDUFS5O43920 106 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 EDF1O60869 148 aaKnown RBP2.14□□□□□ -2.07
CD46-213ENST00000471987 SS18L1O75177 396 aaPredicted RBP2.14□□□□□ -2.07
CD46-213ENST00000471987 TNFP01375 233 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 APOC3P02656 99 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 PMP2P02689 132 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 EIF4EP06730 217 aaKnown RBP2.14□□□□□ -2.07
CD46-213ENST00000471987 CTSDP07339 412 aaPredicted RBP2.14□□□□□ -2.07
CD46-213ENST00000471987 IGLC6P0CF74 106 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 LINC00694P0DN24 101 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 CCL1P22362 96 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 PPIBP23284 216 aaKnown RBP2.14□□□□□ -2.07
CD46-213ENST00000471987 TAS2R46P59540 309 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 UBA52P62987 128 aaKnown RBP2.14□□□□□ -2.07
CD46-213ENST00000471987 UBE2SQ16763 222 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 LRRC10Q5BKY1 277 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 KLF17Q5JT82 389 aaPredicted RBP2.14□□□□□ -2.07
CD46-213ENST00000471987 C1orf100Q5SVJ3 147 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 LCN8Q6JVE9 175 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 CNIH2Q6PI25 160 aa2.14□□□□□ -2.07
CD46-213ENST00000471987 Q6ZN92 141 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms