RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 GNB4Q9HAV0 340 aa10.9□□□□□ -0.66
SSR4-207ENST00000471724 TRBV7-1A0A0A6YYK4 115 aa10.89□□□□□ -0.67
SSR4-207ENST00000471724 SSSCA1O60232 199 aa10.89□□□□□ -0.67
SSR4-207ENST00000471724 IAPPP10997 89 aa10.89□□□□□ -0.67
SSR4-207ENST00000471724 MFAP2P55001 183 aa10.89□□□□□ -0.67
SSR4-207ENST00000471724 PVRIGQ6DKI7 326 aa10.89□□□□□ -0.67
SSR4-207ENST00000471724 C8orf86Q6ZUL3 223 aa10.89□□□□□ -0.67
SSR4-207ENST00000471724 RNASEH2CQ8TDP1 164 aaKnown RBP10.89□□□□□ -0.67
SSR4-207ENST00000471724 NMES1Q9C002 83 aa10.89□□□□□ -0.67
SSR4-207ENST00000471724 DMRT1Q9Y5R6 373 aa10.89□□□□□ -0.67
SSR4-207ENST00000471724 RPS10-NUDT3A0A1W2PQS6 291 aa10.88□□□□□ -0.67
SSR4-207ENST00000471724 I3L521 148 aa10.88□□□□□ -0.67
SSR4-207ENST00000471724 NDUFB8O95169 186 aa10.88□□□□□ -0.67
SSR4-207ENST00000471724 IGHV3-11P01762 117 aa10.88□□□□□ -0.67
SSR4-207ENST00000471724 MBPP02686 304 aaPredicted RBP10.88□□□□□ -0.67
SSR4-207ENST00000471724 PF4P02776 101 aa10.88□□□□□ -0.67
SSR4-207ENST00000471724 PET100P0DJ07 73 aa10.88□□□□□ -0.67
SSR4-207ENST00000471724 PVALBP20472 110 aaPredicted RBP10.88□□□□□ -0.67
SSR4-207ENST00000471724 TAS2R30P59541 319 aa10.88□□□□□ -0.67
SSR4-207ENST00000471724 S100A10P60903 97 aa10.88□□□□□ -0.67
SSR4-207ENST00000471724 POLR2GP62487 172 aaKnown RBP eCLIP10.88□□□□□ -0.67
SSR4-207ENST00000471724 RAB11AP62491 216 aa10.88□□□□□ -0.67
SSR4-207ENST00000471724 HIST2H2BDQ6DRA6 164 aa10.88□□□□□ -0.67
SSR4-207ENST00000471724 ZNF343Q6P1L6 599 aa10.88□□□□□ -0.67
SSR4-207ENST00000471724 OR5B12Q96R08 314 aa10.88□□□□□ -0.67
SSR4-207ENST00000471724 ATP6V0BQ99437 205 aa10.88□□□□□ -0.67
SSR4-207ENST00000471724 GAR1Q9NY12 217 aaKnown RBP10.88□□□□□ -0.67
SSR4-207ENST00000471724 RCL1Q9Y2P8 373 aaKnown RBP10.88□□□□□ -0.67
SSR4-207ENST00000471724 K7EIM0 57 aa10.87□□□□□ -0.67
SSR4-207ENST00000471724 L7N2F9 121 aa10.87□□□□□ -0.67
SSR4-207ENST00000471724 SIX6O95475 246 aa10.87□□□□□ -0.67
SSR4-207ENST00000471724 OR8U8P0C7N1 319 aa10.87□□□□□ -0.67
SSR4-207ENST00000471724 OPRK1P41145 380 aa10.87□□□□□ -0.67
SSR4-207ENST00000471724 H2BFSP57053 126 aa10.87□□□□□ -0.67
SSR4-207ENST00000471724 RRAS2P62070 204 aaPredicted RBP10.87□□□□□ -0.67
SSR4-207ENST00000471724 VAMP2P63027 116 aa10.87□□□□□ -0.67
SSR4-207ENST00000471724 ZNF616Q08AN1 781 aa10.87□□□□□ -0.67
SSR4-207ENST00000471724 C18orf65Q6ZTR6 163 aa10.87□□□□□ -0.67
SSR4-207ENST00000471724 ASB13Q8WXK3 278 aa10.87□□□□□ -0.67
SSR4-207ENST00000471724 PINX1Q96BK5 328 aaKnown RBP10.87□□□□□ -0.67
SSR4-207ENST00000471724 STRAPQ9Y3F4 350 aaKnown RBP10.87□□□□□ -0.67
SSR4-207ENST00000471724 LSM5Q9Y4Y9 91 aaKnown RBP10.87□□□□□ -0.67
SSR4-207ENST00000471724 FBN3Q75N90 2809 aa10.86□□□□□ -0.67
SSR4-207ENST00000471724 MFSD2BA6NFX1 497 aa10.86□□□□□ -0.67
SSR4-207ENST00000471724 K7EPK0 472 aa10.86□□□□□ -0.67
SSR4-207ENST00000471724 CCL24O00175 119 aa10.86□□□□□ -0.67
SSR4-207ENST00000471724 TSC22D2O75157 780 aa10.86□□□□□ -0.67
SSR4-207ENST00000471724 SCGB2A1O75556 95 aa10.86□□□□□ -0.67
SSR4-207ENST00000471724 SCAF4O95104 1147 aaKnown RBP10.86□□□□□ -0.67
SSR4-207ENST00000471724 TSPAN15O95858 294 aa10.86□□□□□ -0.67
SSR4-207ENST00000471724 MT-CO2P00403 227 aa10.86□□□□□ -0.67
SSR4-207ENST00000471724 ZP3P21754 424 aa10.86□□□□□ -0.67
SSR4-207ENST00000471724 MYCNOSP40205 109 aa10.86□□□□□ -0.67
SSR4-207ENST00000471724 IL15RAQ13261 267 aa10.86□□□□□ -0.67
SSR4-207ENST00000471724 RAB32Q13637 225 aa10.86□□□□□ -0.67
SSR4-207ENST00000471724 DEFB136Q30KP8 78 aa10.86□□□□□ -0.67
SSR4-207ENST00000471724 SPANXN5Q5MJ07 72 aa10.86□□□□□ -0.67
SSR4-207ENST00000471724 ETFRF1Q6IPR1 90 aa10.86□□□□□ -0.67
SSR4-207ENST00000471724 DPF1Q92782 380 aa10.86□□□□□ -0.67
SSR4-207ENST00000471724 SMIM8Q96KF7 97 aa10.86□□□□□ -0.67
SSR4-207ENST00000471724 CCDC140Q96MF4 163 aa10.86□□□□□ -0.67
SSR4-207ENST00000471724 RANGRFQ9HD47 186 aaPredicted RBP10.86□□□□□ -0.67
SSR4-207ENST00000471724 C21orf62Q9NYP8 219 aa10.86□□□□□ -0.67
SSR4-207ENST00000471724 PSENENQ9NZ42 101 aa10.86□□□□□ -0.67
SSR4-207ENST00000471724 PEF1Q9UBV8 284 aaKnown RBP10.86□□□□□ -0.67
SSR4-207ENST00000471724 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.85□□□□□ -0.67
SSR4-207ENST00000471724 C15orf62A8K5M9 175 aa10.85□□□□□ -0.67
SSR4-207ENST00000471724 LINC01619G3V211 115 aa10.85□□□□□ -0.67
SSR4-207ENST00000471724 H3BP45 60 aa10.85□□□□□ -0.67
SSR4-207ENST00000471724 I3L2K1 104 aa10.85□□□□□ -0.67
SSR4-207ENST00000471724 HSPB1P04792 205 aaKnown RBP10.85□□□□□ -0.67
SSR4-207ENST00000471724 IFNA4P05014 189 aa10.85□□□□□ -0.67
SSR4-207ENST00000471724 SLC25A4P12235 298 aa10.85□□□□□ -0.67
SSR4-207ENST00000471724 FHL3Q13643 280 aa10.85□□□□□ -0.67
SSR4-207ENST00000471724 FCN2Q15485 313 aa10.85□□□□□ -0.67
SSR4-207ENST00000471724 C11orf87Q6NUJ2 197 aa10.85□□□□□ -0.67
SSR4-207ENST00000471724 TREML4Q6UXN2 200 aa10.85□□□□□ -0.67
SSR4-207ENST00000471724 ETV3LQ6ZN32 361 aa10.85□□□□□ -0.67
SSR4-207ENST00000471724 OR11H1Q8NG94 326 aa10.85□□□□□ -0.67
SSR4-207ENST00000471724 ZNF502Q8TBZ5 544 aa10.85□□□□□ -0.67
SSR4-207ENST00000471724 SCARB1Q8WTV0 552 aa10.85□□□□□ -0.67
SSR4-207ENST00000471724 RAX2Q96IS3 184 aa10.85□□□□□ -0.67
SSR4-207ENST00000471724 TXN2Q99757 166 aa10.85□□□□□ -0.67
SSR4-207ENST00000471724 PAIP2BQ9ULR5 123 aaKnown RBP10.85□□□□□ -0.67
SSR4-207ENST00000471724 WNK1Q9H4A3 2382 aa10.85□□□□□ -0.67
SSR4-207ENST00000471724 IGHV4OR15-8A0A075B7B6 117 aa10.84□□□□□ -0.67
SSR4-207ENST00000471724 A0A087WW49 117 aa10.84□□□□□ -0.67
SSR4-207ENST00000471724 ANKRD34BA5PLL1 514 aa10.84□□□□□ -0.67
SSR4-207ENST00000471724 DEDDO75618 318 aa10.84□□□□□ -0.67
SSR4-207ENST00000471724 RLN2P04090 185 aa10.84□□□□□ -0.67
SSR4-207ENST00000471724 CXCL3P19876 107 aa10.84□□□□□ -0.67
SSR4-207ENST00000471724 FCGR2BP31994 310 aaPredicted RBP10.84□□□□□ -0.67
SSR4-207ENST00000471724 MFAP4P55083 255 aa10.84□□□□□ -0.67
SSR4-207ENST00000471724 ACSM6Q6P461 480 aa10.84□□□□□ -0.67
SSR4-207ENST00000471724 SPSB3Q6PJ21 355 aa10.84□□□□□ -0.67
SSR4-207ENST00000471724 CLEC19AQ6UXS0 136 aa10.84□□□□□ -0.67
SSR4-207ENST00000471724 OR11H7Q8NGC8 314 aa10.84□□□□□ -0.67
SSR4-207ENST00000471724 OR1N2Q8NGR9 330 aa10.84□□□□□ -0.67
SSR4-207ENST00000471724 TMEM170AQ8WVE7 144 aa10.84□□□□□ -0.67
SSR4-207ENST00000471724 PPP1R1CQ8WVI7 109 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms