RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 SRIP30626 198 aa3.25□□□□□ -1.89
SMC5-202ENST00000471372 EIF2B2P49770 351 aaKnown RBP3.25□□□□□ -1.89
SMC5-202ENST00000471372 HINT1P49773 126 aaPredicted RBP3.25□□□□□ -1.89
SMC5-202ENST00000471372 KRTAP10-10P60014 251 aa3.25□□□□□ -1.89
SMC5-202ENST00000471372 NCALDP61601 193 aa3.25□□□□□ -1.89
SMC5-202ENST00000471372 GNG5P63218 68 aa3.25□□□□□ -1.89
SMC5-202ENST00000471372 ZNF90Q03938 601 aa3.25□□□□□ -1.89
SMC5-202ENST00000471372 HES1Q14469 280 aa3.25□□□□□ -1.89
SMC5-202ENST00000471372 CLVS1Q8IUQ0 354 aaPredicted RBP3.25□□□□□ -1.89
SMC5-202ENST00000471372 RPP25LQ8N5L8 163 aaKnown RBP3.25□□□□□ -1.89
SMC5-202ENST00000471372 MRPS24Q96EL2 167 aaKnown RBP3.25□□□□□ -1.89
SMC5-202ENST00000471372 PCBD2Q9H0N5 130 aa3.25□□□□□ -1.89
SMC5-202ENST00000471372 BOLA2Q9H3K6 86 aa3.25□□□□□ -1.89
SMC5-202ENST00000471372 COL4A4P53420 1690 aaPredicted RBP3.24□□□□□ -1.89
SMC5-202ENST00000471372 KIF13BQ9NQT8 1826 aa3.24□□□□□ -1.89
SMC5-202ENST00000471372 SLC22A1O15245 554 aa3.24□□□□□ -1.89
SMC5-202ENST00000471372 IGKV4-1P06312 121 aa3.24□□□□□ -1.89
SMC5-202ENST00000471372 OR4X2Q8NGF9 303 aa3.24□□□□□ -1.89
SMC5-202ENST00000471372 C2orf50Q96LR7 162 aa3.24□□□□□ -1.89
SMC5-202ENST00000471372 SLC39A9Q9NUM3 307 aa3.24□□□□□ -1.89
SMC5-202ENST00000471372 ROCK1Q13464 1354 aa3.24□□□□□ -1.89
SMC5-202ENST00000471372 IGHV1-18A0A0C4DH31 117 aa3.23□□□□□ -1.89
SMC5-202ENST00000471372 G3V2T6 193 aa3.23□□□□□ -1.89
SMC5-202ENST00000471372 H0YJX3 145 aa3.23□□□□□ -1.89
SMC5-202ENST00000471372 MFSD11O43934 449 aa3.23□□□□□ -1.89
SMC5-202ENST00000471372 RHEBQ15382 184 aa3.23□□□□□ -1.89
SMC5-202ENST00000471372 ZNF791Q3KP31 576 aaPredicted RBP3.23□□□□□ -1.89
SMC5-202ENST00000471372 FAM27BQ5VT28 67 aa3.23□□□□□ -1.89
SMC5-202ENST00000471372 C3orf33Q6P1S2 294 aa3.23□□□□□ -1.89
SMC5-202ENST00000471372 LCA10Q71F78 164 aa3.23□□□□□ -1.89
SMC5-202ENST00000471372 CHST6Q9GZX3 395 aa3.23□□□□□ -1.89
SMC5-202ENST00000471372 NDUFB11Q9NX14 153 aa3.23□□□□□ -1.89
SMC5-202ENST00000471372 ERGIC3Q9Y282 383 aa3.23□□□□□ -1.89
SMC5-202ENST00000471372 AMMECR1Q9Y4X0 333 aaPredicted RBP3.23□□□□□ -1.89
SMC5-202ENST00000471372 ARHGAP32A7KAX9 2087 aa3.23□□□□□ -1.89
SMC5-202ENST00000471372 IGHV3-64A0A075B6Q5 118 aa3.22□□□□□ -1.89
SMC5-202ENST00000471372 TMSB15BA0A087X1C1 80 aa3.22□□□□□ -1.89
SMC5-202ENST00000471372 CASP1P29466 404 aa3.22□□□□□ -1.89
SMC5-202ENST00000471372 EMP1P54849 157 aa3.22□□□□□ -1.89
SMC5-202ENST00000471372 PIGPP57054 158 aa3.22□□□□□ -1.89
SMC5-202ENST00000471372 SNCBQ16143 134 aa3.22□□□□□ -1.89
SMC5-202ENST00000471372 AKR1C8PQ5T2L2 129 aa3.22□□□□□ -1.89
SMC5-202ENST00000471372 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
SMC5-202ENST00000471372 EXOC3-AS1Q8N2X6 119 aa3.22□□□□□ -1.89
SMC5-202ENST00000471372 SCGB3A1Q96QR1 104 aa3.22□□□□□ -1.89
SMC5-202ENST00000471372 PRO2289Q9P1D8 64 aa3.22□□□□□ -1.89
SMC5-202ENST00000471372 LTBP2Q14767 1821 aa3.21□□□□□ -1.89
SMC5-202ENST00000471372 PTPRSQ13332 1948 aa3.21□□□□□ -1.9
SMC5-202ENST00000471372 TRBV19A0A075B6N1 114 aa3.21□□□□□ -1.9
SMC5-202ENST00000471372 C1orf196B1AJZ1 125 aa3.21□□□□□ -1.9
SMC5-202ENST00000471372 J3QRK9 145 aa3.21□□□□□ -1.9
SMC5-202ENST00000471372 IGKV1-16P04430 117 aa3.21□□□□□ -1.9
SMC5-202ENST00000471372 SPI1P17947 270 aa3.21□□□□□ -1.9
SMC5-202ENST00000471372 PEBP1P30086 187 aaKnown RBP3.21□□□□□ -1.9
SMC5-202ENST00000471372 PHBP35232 272 aa3.21□□□□□ -1.9
SMC5-202ENST00000471372 ERHP84090 104 aaKnown RBP3.21□□□□□ -1.9
SMC5-202ENST00000471372 ZNF181Q2M3W8 571 aa3.21□□□□□ -1.9
SMC5-202ENST00000471372 LINC01554Q52M75 96 aa3.21□□□□□ -1.9
SMC5-202ENST00000471372 BIN3Q9NQY0 253 aa3.21□□□□□ -1.9
SMC5-202ENST00000471372 PBRM1Q86U86 1689 aa3.2□□□□□ -1.9
SMC5-202ENST00000471372 S100A4P26447 101 aaKnown RBP3.2□□□□□ -1.9
SMC5-202ENST00000471372 SERPINB1P30740 379 aa3.2□□□□□ -1.9
SMC5-202ENST00000471372 TCTAP57738 103 aa3.2□□□□□ -1.9
SMC5-202ENST00000471372 MIR17HGQ75NE6 70 aa3.2□□□□□ -1.9
SMC5-202ENST00000471372 PFN4Q8NHR9 129 aa3.2□□□□□ -1.9
SMC5-202ENST00000471372 DNAJC30Q96LL9 226 aa3.2□□□□□ -1.9
SMC5-202ENST00000471372 LYRM2Q9NU23 88 aaPredicted RBP3.2□□□□□ -1.9
SMC5-202ENST00000471372 SMPXQ9UHP9 88 aa3.2□□□□□ -1.9
SMC5-202ENST00000471372 A0A0D9SEW6 157 aa3.19□□□□□ -1.9
SMC5-202ENST00000471372 A0A0G2JQZ4 141 aa3.19□□□□□ -1.9
SMC5-202ENST00000471372 NDUFC2O95298 119 aa3.19□□□□□ -1.9
SMC5-202ENST00000471372 FUSP35637 526 aaKnown RBP eCLIP3.19□□□□□ -1.9
SMC5-202ENST00000471372 GRINAQ7Z429 371 aa3.19□□□□□ -1.9
SMC5-202ENST00000471372 STX19Q8N4C7 294 aa3.19□□□□□ -1.9
SMC5-202ENST00000471372 ZHX1-C8orf76Q96EF9 292 aa3.19□□□□□ -1.9
SMC5-202ENST00000471372 SH3BGRL3Q9H299 93 aa3.19□□□□□ -1.9
SMC5-202ENST00000471372 TRBV10-2A0A0K0K1G8 114 aa3.18□□□□□ -1.9
SMC5-202ENST00000471372 ZNF860A6NHJ4 632 aa3.18□□□□□ -1.9
SMC5-202ENST00000471372 H7C1C5 153 aa3.18□□□□□ -1.9
SMC5-202ENST00000471372 IFNA7P01567 189 aa3.18□□□□□ -1.9
SMC5-202ENST00000471372 RPSAP08865 295 aaKnown RBP3.18□□□□□ -1.9
SMC5-202ENST00000471372 TMEM258P61165 79 aa3.18□□□□□ -1.9
SMC5-202ENST00000471372 LCN6P62502 163 aa3.18□□□□□ -1.9
SMC5-202ENST00000471372 LYRM7Q5U5X0 104 aa3.18□□□□□ -1.9
SMC5-202ENST00000471372 SMIM15Q7Z3B0 74 aa3.18□□□□□ -1.9
SMC5-202ENST00000471372 KTN1-AS1Q86SY8 53 aa3.18□□□□□ -1.9
SMC5-202ENST00000471372 LRRC28Q86X40 367 aaPredicted RBP3.18□□□□□ -1.9
SMC5-202ENST00000471372 HIST3H2BBQ8N257 126 aa3.18□□□□□ -1.9
SMC5-202ENST00000471372 WFDC5Q8TCV5 224 aa3.18□□□□□ -1.9
SMC5-202ENST00000471372 TMEM106AQ96A25 262 aa3.18□□□□□ -1.9
SMC5-202ENST00000471372 GINS4Q9BRT9 223 aa3.18□□□□□ -1.9
SMC5-202ENST00000471372 CENPHQ9H3R5 247 aa3.18□□□□□ -1.9
SMC5-202ENST00000471372 RNF122Q9H9V4 155 aa3.18□□□□□ -1.9
SMC5-202ENST00000471372 SSR3Q9UNL2 185 aa3.18□□□□□ -1.9
SMC5-202ENST00000471372 ZNF106Q9H2Y7 1883 aaKnown RBP3.18□□□□□ -1.9
SMC5-202ENST00000471372 SYNMO15061 1565 aa3.17□□□□□ -1.9
SMC5-202ENST00000471372 PPP5D1E7EU14 171 aa3.17□□□□□ -1.9
SMC5-202ENST00000471372 CYB5BO43169 146 aa3.17□□□□□ -1.9
SMC5-202ENST00000471372 BANF1O75531 89 aa3.17□□□□□ -1.9
SMC5-202ENST00000471372 IDO1P14902 403 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms