RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 SYT1P21579 422 aa-0.52□□□□□ -2.49
COMMD3-209ENST00000471350 CCL20P78556 96 aa-0.52□□□□□ -2.49
COMMD3-209ENST00000471350 TNFAIP6P98066 277 aaPredicted RBP-0.52□□□□□ -2.49
COMMD3-209ENST00000471350 XIAPP98170 497 aa-0.52□□□□□ -2.49
COMMD3-209ENST00000471350 BATFQ16520 125 aa-0.52□□□□□ -2.49
COMMD3-209ENST00000471350 CDKL4Q5MAI5 379 aa-0.52□□□□□ -2.49
COMMD3-209ENST00000471350 HAGHLQ6PII5 290 aaPredicted RBP-0.52□□□□□ -2.49
COMMD3-209ENST00000471350 OR5A1Q8NGJ0 315 aa-0.52□□□□□ -2.49
COMMD3-209ENST00000471350 TEX47Q8TBZ9 253 aa-0.52□□□□□ -2.49
COMMD3-209ENST00000471350 PSMF1Q92530 271 aa-0.52□□□□□ -2.49
COMMD3-209ENST00000471350 PACRGQ96M98 296 aaPredicted RBP-0.52□□□□□ -2.49
COMMD3-209ENST00000471350 C1orf109Q9NX04 203 aa-0.52□□□□□ -2.49
COMMD3-209ENST00000471350 NHP2Q9NX24 153 aaKnown RBP-0.52□□□□□ -2.49
COMMD3-209ENST00000471350 TP53TG1Q9Y2A0 90 aa-0.52□□□□□ -2.49
COMMD3-209ENST00000471350 CACNA1CQ13936 2221 aa-0.53□□□□□ -2.49
COMMD3-209ENST00000471350 PQLC2LA1A4F0 135 aa-0.53□□□□□ -2.49
COMMD3-209ENST00000471350 C5orf67F2Z3F1 127 aa-0.53□□□□□ -2.49
COMMD3-209ENST00000471350 CCL16O15467 120 aa-0.53□□□□□ -2.49
COMMD3-209ENST00000471350 NUPR1O60356 82 aa-0.53□□□□□ -2.49
COMMD3-209ENST00000471350 ADAP1O75689 374 aa-0.53□□□□□ -2.49
COMMD3-209ENST00000471350 KDELR2P33947 212 aa-0.53□□□□□ -2.49
COMMD3-209ENST00000471350 CXCR4P61073 352 aa-0.53□□□□□ -2.49
COMMD3-209ENST00000471350 ZNHIT3Q15649 155 aaPredicted RBP-0.53□□□□□ -2.49
COMMD3-209ENST00000471350 KISS1Q15726 138 aa-0.53□□□□□ -2.49
COMMD3-209ENST00000471350 AADACL3Q5VUY0 350 aa-0.53□□□□□ -2.49
COMMD3-209ENST00000471350 BPIFA4PQ86YQ2 179 aa-0.53□□□□□ -2.49
COMMD3-209ENST00000471350 PXT1Q8NFP0 134 aa-0.53□□□□□ -2.49
COMMD3-209ENST00000471350 OR5L1Q8NGL2 311 aa-0.53□□□□□ -2.49
COMMD3-209ENST00000471350 OR10J5Q8NHC4 309 aa-0.53□□□□□ -2.49
COMMD3-209ENST00000471350 DHRS9Q9BPW9 319 aa-0.53□□□□□ -2.49
COMMD3-209ENST00000471350 SPANXB1Q9NS25 103 aaPredicted RBP-0.53□□□□□ -2.49
COMMD3-209ENST00000471350 C14orf105Q9NVL8 296 aa-0.53□□□□□ -2.49
COMMD3-209ENST00000471350 SLC35A3Q9Y2D2 325 aa-0.53□□□□□ -2.49
COMMD3-209ENST00000471350 KIF15Q9NS87 1388 aa-0.54□□□□□ -2.5
COMMD3-209ENST00000471350 MUC4Q99102 2169 aa-0.54□□□□□ -2.5
COMMD3-209ENST00000471350 TRBV20OR9-2A0A075B6H5 130 aa-0.54□□□□□ -2.5
COMMD3-209ENST00000471350 IGHV1-58A0A0C4DH39 117 aa-0.54□□□□□ -2.5
COMMD3-209ENST00000471350 FAM228BP0C875 321 aa-0.54□□□□□ -2.5
COMMD3-209ENST00000471350 CDC34P49427 236 aaPredicted RBP-0.54□□□□□ -2.5
COMMD3-209ENST00000471350 CARD18P57730 90 aa-0.54□□□□□ -2.5
COMMD3-209ENST00000471350 SLAMF1Q13291 335 aa-0.54□□□□□ -2.5
COMMD3-209ENST00000471350 LINC01554Q52M75 96 aa-0.54□□□□□ -2.5
COMMD3-209ENST00000471350 Q5BKY6 102 aa-0.54□□□□□ -2.5
COMMD3-209ENST00000471350 C1orf194Q5T5A4 169 aa-0.54□□□□□ -2.5
COMMD3-209ENST00000471350 RPL22L1Q6P5R6 122 aaKnown RBP-0.54□□□□□ -2.5
COMMD3-209ENST00000471350 DNM1P34Q6PK57 102 aa-0.54□□□□□ -2.5
COMMD3-209ENST00000471350 MIR17HGQ75NE6 70 aa-0.54□□□□□ -2.5
COMMD3-209ENST00000471350 CRLF3Q8IUI8 442 aa-0.54□□□□□ -2.5
COMMD3-209ENST00000471350 EEF1AKMT1Q8WVE0 214 aa-0.54□□□□□ -2.5
COMMD3-209ENST00000471350 DERL1Q9BUN8 251 aa-0.54□□□□□ -2.5
COMMD3-209ENST00000471350 DERL2Q9GZP9 239 aa-0.54□□□□□ -2.5
COMMD3-209ENST00000471350 MS4A6AQ9H2W1 248 aa-0.54□□□□□ -2.5
COMMD3-209ENST00000471350 OR51I2Q9H344 312 aa-0.54□□□□□ -2.5
COMMD3-209ENST00000471350 POFUT2Q9Y2G5 429 aa-0.54□□□□□ -2.5
COMMD3-209ENST00000471350 POLR1DQ9Y2S0 133 aa-0.54□□□□□ -2.5
COMMD3-209ENST00000471350 PIK3R4Q99570 1358 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 MYO3BQ8WXR4 1341 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 MCM3APO60318 1980 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 ABCA4P78363 2273 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 ABCA12Q86UK0 2595 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 TRBV30A0A0K0K1B3 111 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 NUPR2A6NF83 97 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 SMIM9A6NGZ8 99 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 FTCDNL1E5RQL4 147 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 ORM1P02763 201 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 IL3P08700 152 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 HIST1H2BOP23527 126 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 HIST1H2BBP33778 126 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 HIST1H2BDP58876 126 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 HIST1H2BCP62807 126 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 GRK1Q15835 563 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 HIST2H2BEQ16778 126 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 HIST2H2BFQ5QNW6 126 aaPredicted RBP-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 TNFAIP8L2Q6P589 184 aaPredicted RBP-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 CLVS1Q8IUQ0 354 aaPredicted RBP-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 RIBC1Q8N443 379 aaPredicted RBP-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 DNAJC9Q8WXX5 260 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 HIST1H2BHQ93079 126 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 HIST1H2BNQ99877 126 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 HIST1H2BMQ99879 126 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 C6orf62Q9GZU0 229 aaPredicted RBP-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 ORMDL1Q9P0S3 153 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 DKKL1Q9UK85 242 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 HMCN2Q8NDA2 5059 aa-0.55□□□□□ -2.5
COMMD3-209ENST00000471350 EML6Q6ZMW3 1958 aa-0.56□□□□□ -2.5
COMMD3-209ENST00000471350 DENND4CQ5VZ89 1909 aa-0.56□□□□□ -2.5
COMMD3-209ENST00000471350 F8VZ95 297 aa-0.56□□□□□ -2.5
COMMD3-209ENST00000471350 DEFB113Q30KQ7 82 aa-0.56□□□□□ -2.5
COMMD3-209ENST00000471350 ST6GALNAC3Q8NDV1 305 aa-0.56□□□□□ -2.5
COMMD3-209ENST00000471350 CNBD2Q96M20 576 aa-0.56□□□□□ -2.5
COMMD3-209ENST00000471350 RABL2AQ9UBK7 228 aaPredicted RBP-0.56□□□□□ -2.5
COMMD3-209ENST00000471350 RNF11Q9Y3C5 154 aa-0.56□□□□□ -2.5
COMMD3-209ENST00000471350 TOPBP1Q92547 1522 aa-0.56□□□□□ -2.5
COMMD3-209ENST00000471350 A0A0J9YY10 115 aa-0.57□□□□□ -2.5
COMMD3-209ENST00000471350 A0A1B0GX78 115 aa-0.57□□□□□ -2.5
COMMD3-209ENST00000471350 TOX3O15405 576 aaPredicted RBP-0.57□□□□□ -2.5
COMMD3-209ENST00000471350 CCL4P13236 92 aa-0.57□□□□□ -2.5
COMMD3-209ENST00000471350 CCL1P22362 96 aa-0.57□□□□□ -2.5
COMMD3-209ENST00000471350 HIST3H2BBQ8N257 126 aa-0.57□□□□□ -2.5
COMMD3-209ENST00000471350 SIGLECL1Q8N7X8 197 aa-0.57□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms