RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 TMEM14BQ9NUH8 114 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 TMEM140Q9NV12 185 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 COMMD9Q9P000 198 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 LSM2Q9Y333 95 aaKnown RBP6.41□□□□□ -1.38
XRN1-208ENST00000470537 TPRKBQ9Y3C4 175 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 PKHD1P08F94 4074 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 hCG_2014768A0A024R1R8 64 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 IGHV3OR16-8A0A075B7F1 116 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 IGKV1D-13A0A0B4J2D9 117 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 TEX50A0A1B0GTY4 177 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 ZNF705EA8MWA4 302 aaPredicted RBP6.4□□□□□ -1.38
XRN1-208ENST00000470537 M0R2N4 97 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 SULT1C2O00338 296 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 RTL8CO15255 209 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 TNFSF12O43508 249 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 GNG7O60262 68 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 SCGB2A1O75556 95 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 GNAO1P09471 354 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 RBMY1A1P0DJD3 496 aaKnown RBP6.4□□□□□ -1.38
XRN1-208ENST00000470537 RBMY1CP0DJD4 496 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 IGKV1-13P0DP09 117 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 RAB3BP20337 219 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 FCGR2CP31995 323 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 EIF2B2P49770 351 aaKnown RBP6.4□□□□□ -1.38
XRN1-208ENST00000470537 WT1-ASQ06250 92 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 RBMY1FQ15415 496 aaKnown RBP6.4□□□□□ -1.38
XRN1-208ENST00000470537 OR13F1Q8NGS4 319 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 OR1P1Q8NH06 330 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 NARS2Q96I59 477 aaKnown RBP6.4□□□□□ -1.38
XRN1-208ENST00000470537 C8orf49Q96NF6 230 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 TSC22D3Q99576 134 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 HINT2Q9BX68 163 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 SLC5A7Q9GZV3 580 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 NXF2Q9GZY0 626 aaKnown RBP6.4□□□□□ -1.38
XRN1-208ENST00000470537 MS4A6AQ9H2W1 248 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 NDUFA4L2Q9NRX3 87 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 PRNDQ9UKY0 176 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 TBC1D24Q9ULP9 559 aa6.4□□□□□ -1.38
XRN1-208ENST00000470537 K7EIM0 57 aa6.39□□□□□ -1.39
XRN1-208ENST00000470537 CDK2AP2O75956 126 aa6.39□□□□□ -1.39
XRN1-208ENST00000470537 NPPCP23582 126 aa6.39□□□□□ -1.39
XRN1-208ENST00000470537 NPBWR1P48145 328 aa6.39□□□□□ -1.39
XRN1-208ENST00000470537 RPS25P62851 125 aaKnown RBP6.39□□□□□ -1.39
XRN1-208ENST00000470537 FABP5Q01469 135 aa6.39□□□□□ -1.39
XRN1-208ENST00000470537 RNF212Q495C1 297 aa6.39□□□□□ -1.39
XRN1-208ENST00000470537 KCTD21Q4G0X4 260 aa6.39□□□□□ -1.39
XRN1-208ENST00000470537 C1orf134Q5TEV5 83 aa6.39□□□□□ -1.39
XRN1-208ENST00000470537 LEMD1Q68G75 181 aa6.39□□□□□ -1.39
XRN1-208ENST00000470537 LAIR2Q6ISS4 152 aa6.39□□□□□ -1.39
XRN1-208ENST00000470537 SLC25A46Q96AG3 418 aa6.39□□□□□ -1.39
XRN1-208ENST00000470537 GRAMD2BQ96HH9 432 aa6.39□□□□□ -1.39
XRN1-208ENST00000470537 MGLLQ99685 303 aa6.39□□□□□ -1.39
XRN1-208ENST00000470537 KRTAP3-1Q9BYR8 98 aa6.39□□□□□ -1.39
XRN1-208ENST00000470537 RNF167Q9H6Y7 350 aa6.39□□□□□ -1.39
XRN1-208ENST00000470537 CCL28Q9NRJ3 127 aa6.39□□□□□ -1.39
XRN1-208ENST00000470537 RABAC1Q9UI14 185 aa6.39□□□□□ -1.39
XRN1-208ENST00000470537 DAPK2Q9UIK4 370 aa6.39□□□□□ -1.39
XRN1-208ENST00000470537 OR51B2Q9Y5P1 312 aa6.39□□□□□ -1.39
XRN1-208ENST00000470537 IGHV3-49A0A0A0MS15 119 aa6.38□□□□□ -1.39
XRN1-208ENST00000470537 IGHV3-21A0A0B4J1V1 117 aa6.38□□□□□ -1.39
XRN1-208ENST00000470537 TEX48A0A1B0GUV7 120 aa6.38□□□□□ -1.39
XRN1-208ENST00000470537 TMEM189A5PLL7 270 aa6.38□□□□□ -1.39
XRN1-208ENST00000470537 MARCH11A6NNE9 402 aa6.38□□□□□ -1.39
XRN1-208ENST00000470537 PPYP01298 95 aa6.38□□□□□ -1.39
XRN1-208ENST00000470537 SPART-AS1P0CW21 52 aa6.38□□□□□ -1.39
XRN1-208ENST00000470537 S100GP29377 79 aa6.38□□□□□ -1.39
XRN1-208ENST00000470537 AP2S1P53680 142 aaPredicted RBP6.38□□□□□ -1.39
XRN1-208ENST00000470537 ERHP84090 104 aaKnown RBP6.38□□□□□ -1.39
XRN1-208ENST00000470537 AADACL3Q5VUY0 350 aa6.38□□□□□ -1.39
XRN1-208ENST00000470537 CMTM1Q8IZ96 169 aa6.38□□□□□ -1.39
XRN1-208ENST00000470537 LILRB2Q8N423 598 aa6.38□□□□□ -1.39
XRN1-208ENST00000470537 BEST4Q8NFU0 473 aa6.38□□□□□ -1.39
XRN1-208ENST00000470537 OR51H1Q8NH63 302 aa6.38□□□□□ -1.39
XRN1-208ENST00000470537 MOB3AQ96BX8 217 aa6.38□□□□□ -1.39
XRN1-208ENST00000470537 ZNF414Q96IQ9 312 aa6.38□□□□□ -1.39
XRN1-208ENST00000470537 VSIRQ9H7M9 311 aa6.38□□□□□ -1.39
XRN1-208ENST00000470537 TRAV3A0A0B4J244 114 aa6.37□□□□□ -1.39
XRN1-208ENST00000470537 TMEM235A6NFC5 223 aa6.37□□□□□ -1.39
XRN1-208ENST00000470537 RGS10O43665 173 aa6.37□□□□□ -1.39
XRN1-208ENST00000470537 KRASP01116 189 aa6.37□□□□□ -1.39
XRN1-208ENST00000470537 F2RP25116 425 aa6.37□□□□□ -1.39
XRN1-208ENST00000470537 FAM3BP58499 235 aaPredicted RBP6.37□□□□□ -1.39
XRN1-208ENST00000470537 HERV-K104P61576 105 aa6.37□□□□□ -1.39
XRN1-208ENST00000470537 UBE2UQ5VVX9 321 aa6.37□□□□□ -1.39
XRN1-208ENST00000470537 ZNF600Q6ZNG1 722 aa6.37□□□□□ -1.39
XRN1-208ENST00000470537 TRPT1Q86TN4 253 aaKnown RBP6.37□□□□□ -1.39
XRN1-208ENST00000470537 NUDCD2Q8WVJ2 157 aa6.37□□□□□ -1.39
XRN1-208ENST00000470537 GPHA2Q96T91 129 aa6.37□□□□□ -1.39
XRN1-208ENST00000470537 DNAH6Q9C0G6 4158 aa6.36□□□□□ -1.39
XRN1-208ENST00000470537 IGHV3OR16-13A0A075B7E8 117 aa6.36□□□□□ -1.39
XRN1-208ENST00000470537 IGHV3-74A0A0B4J1X5 117 aa6.36□□□□□ -1.39
XRN1-208ENST00000470537 SMIM9A6NGZ8 99 aa6.36□□□□□ -1.39
XRN1-208ENST00000470537 C16orf90A8MZG2 172 aa6.36□□□□□ -1.39
XRN1-208ENST00000470537 CBX5P45973 191 aa6.36□□□□□ -1.39
XRN1-208ENST00000470537 HOXA1P49639 335 aaPredicted RBP6.36□□□□□ -1.39
XRN1-208ENST00000470537 OR10A3P58181 314 aa6.36□□□□□ -1.39
XRN1-208ENST00000470537 FXYD4P59646 89 aa6.36□□□□□ -1.39
XRN1-208ENST00000470537 C12orf74Q32Q52 190 aa6.36□□□□□ -1.39
XRN1-208ENST00000470537 TOMM20LQ6UXN7 152 aa6.36□□□□□ -1.39
XRN1-208ENST00000470537 MAPKAPK5-AS1Q8N8E1 139 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms