RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 RAB37Q96AX2 223 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 KCNS1Q96KK3 526 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 SCGB3A2Q96PL1 93 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 OR8B2Q96RD0 313 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 PLA2G2FQ9BZM2 168 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 IMUPQ9GZP8 106 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 ZNF442Q9H7R0 627 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 PDFQ9HBH1 243 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 GOLGA2P5Q9HBQ8 144 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 CMC2Q9NRP2 79 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 KCNIP2Q9NS61 270 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 TRAPPC1Q9Y5R8 145 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 DSPPQ9NZW4 1301 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 DENND4CQ5VZ89 1909 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 ADAMTSL1Q8N6G6 1762 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 MICAL3Q7RTP6 2002 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 A0A096LPK6 155 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 TRBV7-7A0A0K0K1E9 115 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 TEX50A0A1B0GTY4 177 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 H0YIZ8 118 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 RRHO14718 337 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 ZNF324O75467 553 aaPredicted RBP4.14□□□□□ -1.75
COL3A1-205ENST00000470167 ARL6IP5O75915 188 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 NEURL1O76050 574 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 RBP4P02753 201 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 ZNF688P0C7X2 276 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 LIFP15018 202 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 CRISP2P16562 243 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 FKBP2P26885 142 aaKnown RBP4.14□□□□□ -1.75
COL3A1-205ENST00000470167 HLA-DMBP28068 263 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 UBE2E1P51965 193 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 TAS2R45P59539 299 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 IL15RAQ13261 267 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 C12orf74Q32Q52 190 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 GAGE2AQ6NT46 116 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 TCF23Q7RTU1 214 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 AAED1Q7RTV5 226 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 SH2D6Q7Z4S9 175 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 MRPL55Q7Z7F7 128 aaKnown RBP4.14□□□□□ -1.75
COL3A1-205ENST00000470167 ZCCHC24Q8N2G6 241 aaKnown RBP4.14□□□□□ -1.75
COL3A1-205ENST00000470167 RYBPQ8N488 228 aaPredicted RBP4.14□□□□□ -1.75
COL3A1-205ENST00000470167 ANKRD29Q8N6D5 301 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 C11orf45Q8TAV5 145 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 SRSF12Q8WXF0 261 aaKnown RBP4.14□□□□□ -1.75
COL3A1-205ENST00000470167 UBE2E2Q96LR5 201 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 C2orf48Q96LS8 159 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 LINC00479Q96M42 142 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 S1PR3Q99500 378 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 RPP25Q9BUL9 199 aaKnown RBP4.14□□□□□ -1.75
COL3A1-205ENST00000470167 MRPL20Q9BYC9 149 aaKnown RBP4.14□□□□□ -1.75
COL3A1-205ENST00000470167 SPRY4Q9C004 299 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 CISD1Q9NZ45 108 aaKnown RBP4.14□□□□□ -1.75
COL3A1-205ENST00000470167 LAMTOR3Q9UHA4 124 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 OR2W1Q9Y3N9 320 aa4.14□□□□□ -1.75
COL3A1-205ENST00000470167 LSM4Q9Y4Z0 139 aaKnown RBP4.14□□□□□ -1.75
COL3A1-205ENST00000470167 CD163L1Q9NR16 1453 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 COL5A3P25940 1745 aaPredicted RBP4.13□□□□□ -1.75
COL3A1-205ENST00000470167 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.13□□□□□ -1.75
COL3A1-205ENST00000470167 ARFGEF2Q9Y6D5 1785 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 NCBP2LA6PVI3 153 aaKnown RBP4.13□□□□□ -1.75
COL3A1-205ENST00000470167 OOSP1A8MZH6 123 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 NDUFC2-KCTD14E9PQ53 114 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 NUDT14O95848 222 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 COX8AP10176 69 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 FGF6P10767 208 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 CBLN1P23435 193 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 EDNRAP25101 427 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 IL3RAP26951 378 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 DUTP33316 252 aaKnown RBP4.13□□□□□ -1.75
COL3A1-205ENST00000470167 PPP1CCP36873 323 aaKnown RBP4.13□□□□□ -1.75
COL3A1-205ENST00000470167 RPL18AQ02543 176 aaKnown RBP4.13□□□□□ -1.75
COL3A1-205ENST00000470167 LTBQ06643 244 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 PRDX1Q06830 199 aaKnown RBP4.13□□□□□ -1.75
COL3A1-205ENST00000470167 TCF15Q12870 199 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 VMA21Q3ZAQ7 101 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 PRR26Q8N8Z3 221 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 OR10AC1Q8NH08 325 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 CLDND2Q8NHS1 167 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 ZNF689Q96CS4 500 aaPredicted RBP4.13□□□□□ -1.75
COL3A1-205ENST00000470167 ZC2HC1AQ96GY0 325 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 FMC1Q96HJ9 113 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 OR2A5Q96R48 311 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 TMEM204Q9BSN7 226 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 EMC6Q9BV81 110 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 CLEC7AQ9BXN2 247 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 FAM30AQ9NZY2 134 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 BTAF1O14981 1849 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 TMEM131Q92545 1883 aa4.13□□□□□ -1.75
COL3A1-205ENST00000470167 NRAPQ86VF7 1730 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 MAST4O15021 2626 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 TSC2P49815 1807 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 SLX4Q8IY92 1834 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 TRAV18A0A075B6X5 111 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 TRAV27A0A087WT01 109 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 TRBV5-3A0A0A0MS03 114 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 TRAV4A0A0B4J268 109 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 CCL15-CCL14A0A0B4J2E2 113 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 GRIFINA4D1Z8 144 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 ZNF736B4DX44 427 aaPredicted RBP4.12□□□□□ -1.75
COL3A1-205ENST00000470167 H7C1H1 209 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms