RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, human

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-208	ENST00000469585	TATDN3	Q17R31	274 aa		4.85	□□□□□ -1.63
PTCD3-208	ENST00000469585	TRIM16L	Q309B1	348 aa		4.85	□□□□□ -1.63
PTCD3-208	ENST00000469585	PHLDA2	Q53GA4	152 aa		4.85	□□□□□ -1.63
PTCD3-208	ENST00000469585	VAX1	Q5SQQ9	334 aa		4.85	□□□□□ -1.63
PTCD3-208	ENST00000469585	ZNF57	Q68EA5	555 aa	Predicted RBP	4.85	□□□□□ -1.63
PTCD3-208	ENST00000469585	THOC7	Q6I9Y2	204 aa	Known RBP	4.85	□□□□□ -1.63
PTCD3-208	ENST00000469585	DHRS11	Q6UWP2	260 aa		4.85	□□□□□ -1.63
PTCD3-208	ENST00000469585	H2BFWT	Q7Z2G1	175 aa		4.85	□□□□□ -1.63
PTCD3-208	ENST00000469585	ZNF329	Q86UD4	541 aa		4.85	□□□□□ -1.63
PTCD3-208	ENST00000469585	ZNF695	Q8IW36	515 aa		4.85	□□□□□ -1.63
PTCD3-208	ENST00000469585		Q8N402	240 aa		4.85	□□□□□ -1.63
PTCD3-208	ENST00000469585	MAPKAPK5-AS1	Q8N8E1	139 aa		4.85	□□□□□ -1.63
PTCD3-208	ENST00000469585	ZNF383	Q8NA42	475 aa		4.85	□□□□□ -1.63
PTCD3-208	ENST00000469585	KLHL30-AS1	Q8NEE0	82 aa		4.85	□□□□□ -1.63
PTCD3-208	ENST00000469585	SMIM4	Q8WVI0	70 aa		4.85	□□□□□ -1.63
PTCD3-208	ENST00000469585	OR2A7	Q96R45	310 aa		4.85	□□□□□ -1.63
PTCD3-208	ENST00000469585	COA4	Q9NYJ1	87 aa		4.85	□□□□□ -1.63
PTCD3-208	ENST00000469585	ELF5	Q9UKW6	265 aa	Predicted RBP	4.85	□□□□□ -1.63
PTCD3-208	ENST00000469585	TET2	Q6N021	2002 aa	Predicted RBP	4.85	□□□□□ -1.63
PTCD3-208	ENST00000469585	MXRA5	Q9NR99	2828 aa		4.85	□□□□□ -1.63
PTCD3-208	ENST00000469585	ZFHX3	Q15911	3703 aa		4.85	□□□□□ -1.63
PTCD3-208	ENST00000469585	COL6A5	A8TX70	2615 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	IGLV9-49	A0A0B4J1Y8	123 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	SMIM1	B2RUZ4	78 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	ATP6V0E1	O15342	81 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	KBTBD11	O94819	623 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	TRGV3	P03979	118 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	CD3D	P04234	171 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	IGKV1-16	P04430	117 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	IGF1	P05019	195 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	OR8U8	P0C7N1	319 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	CD28	P10747	220 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	PTHLH	P12272	177 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	F2R	P25116	425 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	GNRHR	P30968	328 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	TPPP2	P59282	170 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	RPL8	P62917	257 aa	Known RBP	4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	SRPX	P78539	464 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	SURF2	Q15527	256 aa	Predicted RBP	4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	AKIRIN2	Q53H80	203 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	UTF1	Q5T230	341 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	FAM53A	Q6NSI3	398 aa	Predicted RBP	4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	SSX9	Q7RTT3	188 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	SGPP2	Q8IWX5	399 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585		Q8N6K4	173 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	OR4A16	Q8NH70	328 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	TERB2	Q8NHR7	220 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	S100Z	Q8WXG8	99 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	TAF15	Q92804	592 aa	Known RBP eCLIP	4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	TMEM56	Q96MV1	263 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	NOL4L	Q96MY1	436 aa	Predicted RBP	4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	CITED2	Q99967	270 aa	Predicted RBP	4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	PARP12	Q9H0J9	701 aa	Known RBP	4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	PALMD	Q9NP74	551 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	BATF3	Q9NR55	127 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	CCL28	Q9NRJ3	127 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	FAM212B	Q9NTI7	297 aa	Predicted RBP	4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	KLK11	Q9UBX7	282 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	LINC00527	Q9UJ94	153 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	PRND	Q9UKY0	176 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	VSIG4	Q9Y279	399 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	WSB1	Q9Y6I7	421 aa		4.84	□□□□□ -1.63
PTCD3-208	ENST00000469585	IGKV1D-8	A0A087WSZ0	117 aa		4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	IGKV1D-13	A0A0B4J2D9	117 aa		4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	NAP1L6	A6NFF2	107 aa		4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	PMS2P5	A8MQ11	134 aa		4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	GSTZ1	O43708	216 aa	Predicted RBP	4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	IGHG4	P01861	327 aa		4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	SAA1	P0DJI8	122 aa	Predicted RBP	4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	IGKV1-13	P0DP09	117 aa		4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	HIST1H1B	P16401	226 aa	Known RBP	4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	RPL27A	P46776	148 aa	Known RBP	4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	SUB1	P53999	127 aa	Known RBP eCLIP	4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	PIGP	P57054	158 aa		4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	RPL23A	P62750	156 aa	Known RBP	4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	DHODH	Q02127	395 aa		4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	ZNF45	Q02386	682 aa		4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	ZNF415	Q09FC8	603 aa		4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	PRSS8	Q16651	343 aa		4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	CNPY1	Q3B7I2	92 aa		4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	IDO2	Q6ZQW0	420 aa		4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	ZNF818P	Q6ZRF7	136 aa		4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	C5orf24	Q7Z6I8	188 aa		4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	GDPD1	Q8N9F7	314 aa		4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	THAP8	Q8NA92	274 aa		4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	LFNG	Q8NES3	379 aa		4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	OR11H4	Q8NGC9	324 aa		4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	OR1L6	Q8NGR2	347 aa		4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	C4orf3	Q8WVX3	66 aa		4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	USMG5	Q96IX5	58 aa		4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	HINT2	Q9BX68	163 aa		4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	SLIRP	Q9GZT3	109 aa	Known RBP	4.83	□□□□□ -1.64
PTCD3-208	ENST00000469585	IGHV7-81	A0A0B4J1V7	117 aa		4.82	□□□□□ -1.64
PTCD3-208	ENST00000469585	C3orf85	A0A1B0GTC6	90 aa		4.82	□□□□□ -1.64
PTCD3-208	ENST00000469585	MSGN1	A6NI15	193 aa		4.82	□□□□□ -1.64
PTCD3-208	ENST00000469585	FAM223B	A6NKX1	122 aa		4.82	□□□□□ -1.64
PTCD3-208	ENST00000469585		H0Y980	276 aa		4.82	□□□□□ -1.64
PTCD3-208	ENST00000469585	PGLYRP1	O75594	196 aa	Predicted RBP	4.82	□□□□□ -1.64
PTCD3-208	ENST00000469585	KRAS	P01116	189 aa		4.82	□□□□□ -1.64

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