RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 NPFFO15130 113 aa7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 YIF1AO95070 293 aa7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 IGLV1-40P01703 118 aa7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 HSPB1P04792 205 aaKnown RBP7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 SFTA3P0C7M3 94 aa7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 FAM106CPP0CH98 169 aa7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 GATA3P23771 443 aa7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 BRS3P32247 399 aa7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 GAMTQ14353 236 aa7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 ETFRF1Q6IPR1 90 aa7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 LCN15Q6UWW0 184 aa7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 LRRC75A-AS1Q8N1F1 130 aa7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 DYNAPQ8N1N2 210 aa7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 SVBPQ8N300 66 aa7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 OR1L6Q8NGR2 347 aa7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 SRSF12Q8WXF0 261 aaKnown RBP7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 PERPQ96FX8 193 aa7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 SLC35E1Q96K37 410 aa7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 MAP1LC3BQ9GZQ8 125 aa7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 EIF5A2Q9GZV4 153 aaKnown RBP7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 SLC35B3Q9H1N7 401 aa7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 BEX4Q9NWD9 120 aaPredicted RBP7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 F11RQ9Y624 299 aaKnown RBP7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 PXMP4Q9Y6I8 212 aa7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 UBR5O95071 2799 aaPredicted RBP7.6□□□□□ -1.19
APOBEC1-202ENST00000467171 LRRK2Q5S007 2527 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 CENPVL3A0A0U1RRI6 287 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 LOC102723971A0A1B0GUV8 181 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 A0A1W2PRD5 423 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 A0A1W2PRF3 423 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 A0A1W2PRM7 423 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 A1L4Q6 167 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 B4DSR2 109 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 FCN1O00602 326 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 IFNA1P01562 189 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 MSMBP08118 114 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 BCL2P10415 239 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 B2MP61769 119 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 ICAM4Q14773 271 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 PLGLAQ15195 96 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 CLEC12BQ2HXU8 276 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 LCE3BQ5TA77 95 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 MIC13Q5XKP0 118 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 ZNF562Q6V9R5 426 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 RBMS3Q6XE24 437 aaKnown RBP7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 SSX7Q7RTT5 188 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 THAP8Q8NA92 274 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 C19orf24Q9BVV8 132 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 C1RLQ9NZP8 487 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 AKAP6Q13023 2319 aa7.59□□□□□ -1.19
APOBEC1-202ENST00000467171 DOCK11Q5JSL3 2073 aa7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 FAM208BQ5VWN6 2430 aa7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 IGKV1OR2-108A0A075B7D4 117 aa7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 A0A096LNT2 108 aa7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 TRAV20A0A0B4J274 112 aa7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 IGHV1-69DA0A0B4J2H0 117 aa7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 A0A1B0GV50 99 aa7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 IGHV1-69P01742 117 aa7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 SRP19P09132 144 aaKnown RBP7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 LINC00869P0C866 280 aa7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 SAA4P35542 130 aa7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 CDC34P49427 236 aaPredicted RBP7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 PPT1P50897 306 aa7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 DEFA5Q01523 94 aa7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 HES1Q14469 280 aa7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 HNF4GQ14541 408 aa7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 FAM122CQ6P4D5 195 aa7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 STPG3Q8N7X2 389 aa7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 C17orf50Q8WW18 174 aa7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 RAB24Q969Q5 203 aa7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 RARRES2Q99969 163 aa7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 MEGF9Q9H1U4 602 aa7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 FNDC4Q9H6D8 234 aaPredicted RBP7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 TNCP24821 2201 aa7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 COL12A1Q99715 3063 aa7.58□□□□□ -1.2
APOBEC1-202ENST00000467171 A0A1W2PPV4 95 aa7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 NPIPB5A8MRT5 1133 aa7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 J3QKU1 62 aa7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 SNAPINO95295 136 aa7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 CNIH1O95406 144 aa7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 PLA2G2AP14555 144 aa7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 AREGP15514 252 aa7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 TMEM11P17152 192 aa7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 CTRB1P17538 263 aa7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 OR10J1P30954 320 aa7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 PSMB3P49720 205 aa7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 MFAP2P55001 183 aa7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 SELENOTP62341 195 aa7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 GNB1P62873 340 aa7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 CX3CL1P78423 397 aa7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 LOXL1Q08397 574 aaPredicted RBP7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 FXYD3Q14802 87 aa7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 MLANAQ16655 118 aa7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 GUCA2BQ16661 112 aa7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 HAGHQ16775 308 aa7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 CTRB2Q6GPI1 263 aa7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 SLC35E3Q7Z769 313 aa7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 TMEM116Q8NCL8 245 aa7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 OR2T6Q8NHC8 308 aa7.57□□□□□ -1.2
APOBEC1-202ENST00000467171 SSMEM1Q8WWF3 244 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms