RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 ZNF80P51504 273 aaPredicted RBP1.71□□□□□ -2.14
VPS13A-209ENST00000467124 HIST1H3AP68431 136 aa1.71□□□□□ -2.14
VPS13A-209ENST00000467124 H3F3AP84243 136 aa1.71□□□□□ -2.14
VPS13A-209ENST00000467124 KRTAP13-4Q3LI77 160 aa1.71□□□□□ -2.14
VPS13A-209ENST00000467124 SPANXN3Q5MJ09 141 aa1.71□□□□□ -2.14
VPS13A-209ENST00000467124 C7orf65Q6ZTY9 151 aa1.71□□□□□ -2.14
VPS13A-209ENST00000467124 DYNAPQ8N1N2 210 aa1.71□□□□□ -2.14
VPS13A-209ENST00000467124 TMEM86AQ8N2M4 240 aa1.71□□□□□ -2.14
VPS13A-209ENST00000467124 WFDC11Q8NEX6 87 aa1.71□□□□□ -2.14
VPS13A-209ENST00000467124 OR13C4Q8NGS5 318 aa1.71□□□□□ -2.14
VPS13A-209ENST00000467124 RASSF5Q8WWW0 418 aa1.71□□□□□ -2.14
VPS13A-209ENST00000467124 TMEM106AQ96A25 262 aa1.71□□□□□ -2.14
VPS13A-209ENST00000467124 NMNAT1Q9HAN9 279 aaPredicted RBP1.71□□□□□ -2.14
VPS13A-209ENST00000467124 SLC39A9Q9NUM3 307 aa1.71□□□□□ -2.14
VPS13A-209ENST00000467124 BAIAP2Q9UQB8 552 aa1.71□□□□□ -2.14
VPS13A-209ENST00000467124 PTPRSQ13332 1948 aa1.71□□□□□ -2.14
VPS13A-209ENST00000467124 VWDEQ8N2E2 1590 aa1.71□□□□□ -2.14
VPS13A-209ENST00000467124 HEATR5AQ86XA9 2040 aa1.71□□□□□ -2.14
VPS13A-209ENST00000467124 TTC21AQ8NDW8 1320 aa1.7□□□□□ -2.14
VPS13A-209ENST00000467124 TRBV10-2A0A0K0K1G8 114 aa1.7□□□□□ -2.14
VPS13A-209ENST00000467124 FAM159BA6NKW6 160 aa1.7□□□□□ -2.14
VPS13A-209ENST00000467124 PCF11O94913 1555 aaKnown RBP1.7□□□□□ -2.14
VPS13A-209ENST00000467124 S1PR2O95136 353 aa1.7□□□□□ -2.14
VPS13A-209ENST00000467124 ZNF682O95780 498 aa1.7□□□□□ -2.14
VPS13A-209ENST00000467124 NAPSAO96009 420 aa1.7□□□□□ -2.14
VPS13A-209ENST00000467124 C1QCP02747 245 aa1.7□□□□□ -2.14
VPS13A-209ENST00000467124 CST2P09228 141 aa1.7□□□□□ -2.14
VPS13A-209ENST00000467124 RBP1P09455 135 aa1.7□□□□□ -2.14
VPS13A-209ENST00000467124 SMIM10L2AP0DMW4 78 aa1.7□□□□□ -2.14
VPS13A-209ENST00000467124 SMIM10L2BP0DMW5 78 aa1.7□□□□□ -2.14
VPS13A-209ENST00000467124 AKIRIN2Q53H80 203 aa1.7□□□□□ -2.14
VPS13A-209ENST00000467124 OOSP2Q86WS3 158 aa1.7□□□□□ -2.14
VPS13A-209ENST00000467124 CPAMD8Q8IZJ3 1885 aa1.7□□□□□ -2.14
VPS13A-209ENST00000467124 HSPB9Q9BQS6 159 aa1.7□□□□□ -2.14
VPS13A-209ENST00000467124 CST9LQ9H4G1 147 aa1.7□□□□□ -2.14
VPS13A-209ENST00000467124 SAMHD1Q9Y3Z3 626 aaKnown RBP1.7□□□□□ -2.14
VPS13A-209ENST00000467124 NUMA1Q14980 2115 aa1.7□□□□□ -2.14
VPS13A-209ENST00000467124 SCAF11Q99590 1463 aaKnown RBP1.69□□□□□ -2.14
VPS13A-209ENST00000467124 PTPRBP23467 1997 aa1.69□□□□□ -2.14
VPS13A-209ENST00000467124 RGS12O14924 1447 aa1.69□□□□□ -2.14
VPS13A-209ENST00000467124 OR51F1A6NGY5 319 aa1.69□□□□□ -2.14
VPS13A-209ENST00000467124 OR2J2O76002 312 aa1.69□□□□□ -2.14
VPS13A-209ENST00000467124 CDC42P60953 191 aa1.69□□□□□ -2.14
VPS13A-209ENST00000467124 TMEM42Q69YG0 159 aa1.69□□□□□ -2.14
VPS13A-209ENST00000467124 Q6ZRN7 208 aaPredicted RBP1.69□□□□□ -2.14
VPS13A-209ENST00000467124 TERB2Q8NHR7 220 aa1.69□□□□□ -2.14
VPS13A-209ENST00000467124 SCGB3A1Q96QR1 104 aa1.69□□□□□ -2.14
VPS13A-209ENST00000467124 C8orf4Q9NR00 106 aa1.69□□□□□ -2.14
VPS13A-209ENST00000467124 ERGIC3Q9Y282 383 aa1.69□□□□□ -2.14
VPS13A-209ENST00000467124 IBA57-AS1B1ANH7 110 aa1.68□□□□□ -2.14
VPS13A-209ENST00000467124 HMGB3O15347 200 aaKnown RBP1.68□□□□□ -2.14
VPS13A-209ENST00000467124 IFNA10P01566 189 aa1.68□□□□□ -2.14
VPS13A-209ENST00000467124 PMP2P02689 132 aa1.68□□□□□ -2.14
VPS13A-209ENST00000467124 CRPP02741 224 aa1.68□□□□□ -2.14
VPS13A-209ENST00000467124 C8GP07360 202 aa1.68□□□□□ -2.14
VPS13A-209ENST00000467124 NEFHP12036 1026 aa1.68□□□□□ -2.14
VPS13A-209ENST00000467124 G0S2P27469 103 aa1.68□□□□□ -2.14
VPS13A-209ENST00000467124 ERP29P30040 261 aaKnown RBP1.68□□□□□ -2.14
VPS13A-209ENST00000467124 SRIP30626 198 aa1.68□□□□□ -2.14
VPS13A-209ENST00000467124 ARHGAP11BQ3KRB8 267 aa1.68□□□□□ -2.14
VPS13A-209ENST00000467124 KHDC3LQ587J8 217 aa1.68□□□□□ -2.14
VPS13A-209ENST00000467124 LCN15Q6UWW0 184 aa1.68□□□□□ -2.14
VPS13A-209ENST00000467124 MIR17HGQ75NE6 70 aa1.68□□□□□ -2.14
VPS13A-209ENST00000467124 COA5Q86WW8 74 aa1.68□□□□□ -2.14
VPS13A-209ENST00000467124 PXT1Q8NFP0 134 aa1.68□□□□□ -2.14
VPS13A-209ENST00000467124 OR8B3Q8NGG8 313 aa1.68□□□□□ -2.14
VPS13A-209ENST00000467124 OR5A1Q8NGJ0 315 aa1.68□□□□□ -2.14
VPS13A-209ENST00000467124 PAIP2Q9BPZ3 127 aaKnown RBP1.68□□□□□ -2.14
VPS13A-209ENST00000467124 GBF1Q92538 1859 aa1.68□□□□□ -2.14
VPS13A-209ENST00000467124 ZFHX2Q9C0A1 2572 aaPredicted RBP1.68□□□□□ -2.14
VPS13A-209ENST00000467124 SCN10AQ9Y5Y9 1956 aa1.68□□□□□ -2.14
VPS13A-209ENST00000467124 DOCK10Q96BY6 2186 aa1.68□□□□□ -2.14
VPS13A-209ENST00000467124 ADGRL3Q9HAR2 1447 aa1.67□□□□□ -2.14
VPS13A-209ENST00000467124 IGKV1D-42A0A075B6H8 117 aa1.67□□□□□ -2.14
VPS13A-209ENST00000467124 TMEM212A6NML5 194 aa1.67□□□□□ -2.14
VPS13A-209ENST00000467124 CLPSP04118 112 aa1.67□□□□□ -2.14
VPS13A-209ENST00000467124 GPX1P07203 203 aa1.67□□□□□ -2.14
VPS13A-209ENST00000467124 SPI1P17947 270 aa1.67□□□□□ -2.14
VPS13A-209ENST00000467124 PPIBP23284 216 aaKnown RBP1.67□□□□□ -2.14
VPS13A-209ENST00000467124 S100A4P26447 101 aaKnown RBP1.67□□□□□ -2.14
VPS13A-209ENST00000467124 CASP1P29466 404 aa1.67□□□□□ -2.14
VPS13A-209ENST00000467124 ZNF345Q14585 488 aa1.67□□□□□ -2.14
VPS13A-209ENST00000467124 AAED1Q7RTV5 226 aa1.67□□□□□ -2.14
VPS13A-209ENST00000467124 C12orf45Q8N5I9 185 aaPredicted RBP1.67□□□□□ -2.14
VPS13A-209ENST00000467124 C9orf163Q8N9P6 203 aa1.67□□□□□ -2.14
VPS13A-209ENST00000467124 ZNF439Q8NDP4 499 aa1.67□□□□□ -2.14
VPS13A-209ENST00000467124 PFN4Q8NHR9 129 aa1.67□□□□□ -2.14
VPS13A-209ENST00000467124 C11orf40Q8WZ69 217 aa1.67□□□□□ -2.14
VPS13A-209ENST00000467124 OSTCQ9NRP0 149 aa1.67□□□□□ -2.14
VPS13A-209ENST00000467124 UTP11Q9Y3A2 253 aaKnown RBP1.67□□□□□ -2.14
VPS13A-209ENST00000467124 KIF13BQ9NQT8 1826 aa1.66□□□□□ -2.14
VPS13A-209ENST00000467124 SDCBPO00560 298 aaPredicted RBP1.66□□□□□ -2.14
VPS13A-209ENST00000467124 GPX2P18283 190 aa1.66□□□□□ -2.14
VPS13A-209ENST00000467124 NFYAP23511 347 aaPredicted RBP1.66□□□□□ -2.14
VPS13A-209ENST00000467124 FKBP2P26885 142 aaKnown RBP1.66□□□□□ -2.14
VPS13A-209ENST00000467124 FXYD2P54710 66 aa1.66□□□□□ -2.14
VPS13A-209ENST00000467124 RHOBP62745 196 aa1.66□□□□□ -2.14
VPS13A-209ENST00000467124 NDUFA5Q16718 116 aa1.66□□□□□ -2.14
VPS13A-209ENST00000467124 TEX36Q5VZQ5 186 aa1.66□□□□□ -2.14
VPS13A-209ENST00000467124 DPPA3Q6W0C5 159 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms