RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 PCNX2A6NKB5 2137 aa1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 SIGLEC16A6NMB1 481 aa1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 TRAPPC2LH3BP13 241 aa1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 SULT1B1O43704 296 aa1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 PGLYRP1O75594 196 aaPredicted RBP1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 TRGC1P0CF51 173 aa1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 PSMD8P48556 350 aa1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 FXYD2P54710 66 aa1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 AQP4P55087 323 aa1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 DEFA3P59666 94 aa1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 SLC36A1Q7Z2H8 476 aa1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 TMEM86AQ8N2M4 240 aa1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 OR11H6Q8NGC7 330 aa1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 SLC25A40Q8TBP6 338 aa1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 AP3S1Q92572 193 aa1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 TMEM106AQ96A25 262 aa1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 SCGB3A1Q96QR1 104 aa1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 SLC39A9Q9NUM3 307 aa1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 TMEM106BQ9NUM4 274 aa1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 ARMC1Q9NVT9 282 aa1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 PXDNLA1KZ92 1463 aa1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 ADAMTS7Q9UKP4 1686 aa1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 KDM5BQ9UGL1 1544 aa1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 WDR90Q96KV7 1748 aa1.6□□□□□ -2.15
PRPF40A-205ENST00000467114 RTL1A6NKG5 1358 aa1.59□□□□□ -2.15
PRPF40A-205ENST00000467114 PCF11O94913 1555 aaKnown RBP1.59□□□□□ -2.15
PRPF40A-205ENST00000467114 MAST2Q6P0Q8 1798 aa1.59□□□□□ -2.15
PRPF40A-205ENST00000467114 ICE1Q9Y2F5 2266 aa1.59□□□□□ -2.15
PRPF40A-205ENST00000467114 MEIS3P1A6NDR6 274 aa1.59□□□□□ -2.15
PRPF40A-205ENST00000467114 OR51F1A6NGY5 319 aa1.59□□□□□ -2.15
PRPF40A-205ENST00000467114 BUB1B-PAK6H3BSN5 160 aa1.59□□□□□ -2.15
PRPF40A-205ENST00000467114 S1PR2O95136 353 aa1.59□□□□□ -2.15
PRPF40A-205ENST00000467114 S100A4P26447 101 aaKnown RBP1.59□□□□□ -2.15
PRPF40A-205ENST00000467114 ERP29P30040 261 aaKnown RBP1.59□□□□□ -2.15
PRPF40A-205ENST00000467114 ZNF80P51504 273 aaPredicted RBP1.59□□□□□ -2.15
PRPF40A-205ENST00000467114 TMEM155Q4W5P6 130 aa1.59□□□□□ -2.15
PRPF40A-205ENST00000467114 DHRS4L2Q6PKH6 230 aa1.59□□□□□ -2.15
PRPF40A-205ENST00000467114 Q6Q795 121 aa1.59□□□□□ -2.15
PRPF40A-205ENST00000467114 CLVS1Q8IUQ0 354 aaPredicted RBP1.59□□□□□ -2.15
PRPF40A-205ENST00000467114 TERB2Q8NHR7 220 aa1.59□□□□□ -2.15
PRPF40A-205ENST00000467114 C11orf40Q8WZ69 217 aa1.59□□□□□ -2.15
PRPF40A-205ENST00000467114 C2orf50Q96LR7 162 aa1.59□□□□□ -2.15
PRPF40A-205ENST00000467114 GINS4Q9BRT9 223 aa1.59□□□□□ -2.15
PRPF40A-205ENST00000467114 PARVBQ9HBI1 364 aa1.59□□□□□ -2.15
PRPF40A-205ENST00000467114 C8orf4Q9NR00 106 aa1.59□□□□□ -2.15
PRPF40A-205ENST00000467114 TVP23BQ9NYZ1 205 aa1.59□□□□□ -2.15
PRPF40A-205ENST00000467114 COL4A2P08572 1712 aa1.59□□□□□ -2.16
PRPF40A-205ENST00000467114 MALRD1Q5VYJ5 2156 aa1.59□□□□□ -2.16
PRPF40A-205ENST00000467114 COL11A1P12107 1806 aaPredicted RBP1.59□□□□□ -2.16
PRPF40A-205ENST00000467114 KIF13BQ9NQT8 1826 aa1.59□□□□□ -2.16
PRPF40A-205ENST00000467114 NCKAP5O14513 1909 aa1.58□□□□□ -2.16
PRPF40A-205ENST00000467114 ZNF860A6NHJ4 632 aa1.58□□□□□ -2.16
PRPF40A-205ENST00000467114 ORC5O43913 435 aa1.58□□□□□ -2.16
PRPF40A-205ENST00000467114 OR2J2O76002 312 aa1.58□□□□□ -2.16
PRPF40A-205ENST00000467114 CIAO1O76071 339 aa1.58□□□□□ -2.16
PRPF40A-205ENST00000467114 NAPSAO96009 420 aa1.58□□□□□ -2.16
PRPF40A-205ENST00000467114 CASP1P29466 404 aa1.58□□□□□ -2.16
PRPF40A-205ENST00000467114 G6PCP35575 357 aa1.58□□□□□ -2.16
PRPF40A-205ENST00000467114 SERPINB9P50453 376 aa1.58□□□□□ -2.16
PRPF40A-205ENST00000467114 CDC42P60953 191 aa1.58□□□□□ -2.16
PRPF40A-205ENST00000467114 NDUFA5Q16718 116 aa1.58□□□□□ -2.16
PRPF40A-205ENST00000467114 GOLT1AQ6ZVE7 132 aa1.58□□□□□ -2.16
PRPF40A-205ENST00000467114 MIR17HGQ75NE6 70 aa1.58□□□□□ -2.16
PRPF40A-205ENST00000467114 BAIAP2Q9UQB8 552 aa1.58□□□□□ -2.16
PRPF40A-205ENST00000467114 ERGIC3Q9Y282 383 aa1.58□□□□□ -2.16
PRPF40A-205ENST00000467114 GREB1Q4ZG55 1949 aa1.58□□□□□ -2.16
PRPF40A-205ENST00000467114 DENND4BO75064 1496 aaPredicted RBP1.57□□□□□ -2.16
PRPF40A-205ENST00000467114 CLDN25C9JDP6 229 aa1.57□□□□□ -2.16
PRPF40A-205ENST00000467114 ZNF737O75373 536 aa1.57□□□□□ -2.16
PRPF40A-205ENST00000467114 C1QCP02747 245 aa1.57□□□□□ -2.16
PRPF40A-205ENST00000467114 METTL15P1P0C7V9 234 aa1.57□□□□□ -2.16
PRPF40A-205ENST00000467114 CYBAP13498 195 aa1.57□□□□□ -2.16
PRPF40A-205ENST00000467114 HSPE1P61604 102 aaKnown RBP1.57□□□□□ -2.16
PRPF40A-205ENST00000467114 RPL19P84098 196 aaKnown RBP1.57□□□□□ -2.16
PRPF40A-205ENST00000467114 DPPA3Q6W0C5 159 aa1.57□□□□□ -2.16
PRPF40A-205ENST00000467114 HIST3H2BBQ8N257 126 aa1.57□□□□□ -2.16
PRPF40A-205ENST00000467114 WFDC11Q8NEX6 87 aa1.57□□□□□ -2.16
PRPF40A-205ENST00000467114 OR52R1Q8NGF1 315 aa1.57□□□□□ -2.16
PRPF40A-205ENST00000467114 OR8B3Q8NGG8 313 aa1.57□□□□□ -2.16
PRPF40A-205ENST00000467114 PFN4Q8NHR9 129 aa1.57□□□□□ -2.16
PRPF40A-205ENST00000467114 SPACA4Q8TDM5 124 aa1.57□□□□□ -2.16
PRPF40A-205ENST00000467114 HSPB9Q9BQS6 159 aa1.57□□□□□ -2.16
PRPF40A-205ENST00000467114 HECW1Q76N89 1606 aa1.57□□□□□ -2.16
PRPF40A-205ENST00000467114 HEATR5AQ86XA9 2040 aa1.57□□□□□ -2.16
PRPF40A-205ENST00000467114 SCAF11Q99590 1463 aaKnown RBP1.56□□□□□ -2.16
PRPF40A-205ENST00000467114 PTPRBP23467 1997 aa1.56□□□□□ -2.16
PRPF40A-205ENST00000467114 CUL9Q8IWT3 2517 aa1.56□□□□□ -2.16
PRPF40A-205ENST00000467114 TRAPPC13A5PLN9 417 aa1.56□□□□□ -2.16
PRPF40A-205ENST00000467114 OVOL1O14753 267 aa1.56□□□□□ -2.16
PRPF40A-205ENST00000467114 HMGB3O15347 200 aaKnown RBP1.56□□□□□ -2.16
PRPF40A-205ENST00000467114 PMP2P02689 132 aa1.56□□□□□ -2.16
PRPF40A-205ENST00000467114 IFI30P13284 250 aa1.56□□□□□ -2.16
PRPF40A-205ENST00000467114 G0S2P27469 103 aa1.56□□□□□ -2.16
PRPF40A-205ENST00000467114 KRTAP12-1P59990 96 aa1.56□□□□□ -2.16
PRPF40A-205ENST00000467114 DEFB103AP81534 67 aa1.56□□□□□ -2.16
PRPF40A-205ENST00000467114 KRR1Q13601 381 aaKnown RBP1.56□□□□□ -2.16
PRPF40A-205ENST00000467114 LCN15Q6UWW0 184 aa1.56□□□□□ -2.16
PRPF40A-205ENST00000467114 LCA10Q71F78 164 aa1.56□□□□□ -2.16
PRPF40A-205ENST00000467114 TMED4Q7Z7H5 227 aa1.56□□□□□ -2.16
PRPF40A-205ENST00000467114 TRAPPC6BQ86SZ2 158 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms