RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 ZNF114Q8NC26 417 aa13.74□□□□□ -0.21
SRSF4-202ENST00000466448 ST8SIA2Q92186 375 aa13.74□□□□□ -0.21
SRSF4-202ENST00000466448 YIPF6Q96EC8 236 aa13.74□□□□□ -0.21
SRSF4-202ENST00000466448 S100A16Q96FQ6 103 aaKnown RBP13.74□□□□□ -0.21
SRSF4-202ENST00000466448 GNG7O60262 68 aa13.73□□□□□ -0.21
SRSF4-202ENST00000466448 APOHP02749 345 aaPredicted RBP13.73□□□□□ -0.21
SRSF4-202ENST00000466448 NAT1P18440 290 aa13.73□□□□□ -0.21
SRSF4-202ENST00000466448 TCTAP57738 103 aa13.73□□□□□ -0.21
SRSF4-202ENST00000466448 PHLDA2Q53GA4 152 aa13.73□□□□□ -0.21
SRSF4-202ENST00000466448 LEMD1Q68G75 181 aa13.73□□□□□ -0.21
SRSF4-202ENST00000466448 TOMM20LQ6UXN7 152 aa13.73□□□□□ -0.21
SRSF4-202ENST00000466448 CROCCP3Q8IVE0 287 aa13.73□□□□□ -0.21
SRSF4-202ENST00000466448 OR6F1Q8NGZ6 308 aa13.73□□□□□ -0.21
SRSF4-202ENST00000466448 PINX1Q96BK5 328 aaKnown RBP13.73□□□□□ -0.21
SRSF4-202ENST00000466448 SEC22AQ96IW7 307 aa13.73□□□□□ -0.21
SRSF4-202ENST00000466448 MS4A6AQ9H2W1 248 aa13.73□□□□□ -0.21
SRSF4-202ENST00000466448 VSIRQ9H7M9 311 aa13.73□□□□□ -0.21
SRSF4-202ENST00000466448 KIAA1109Q2LD37 5005 aa13.72□□□□□ -0.21
SRSF4-202ENST00000466448 CD5P06127 495 aa13.72□□□□□ -0.21
SRSF4-202ENST00000466448 TAS2R20P59543 309 aa13.72□□□□□ -0.21
SRSF4-202ENST00000466448 DEFB131AP59861 70 aa13.72□□□□□ -0.21
SRSF4-202ENST00000466448 PRCDQ00LT1 54 aa13.72□□□□□ -0.21
SRSF4-202ENST00000466448 UBE2NLQ5JXB2 153 aa13.72□□□□□ -0.21
SRSF4-202ENST00000466448 TMEM69Q5SWH9 247 aa13.72□□□□□ -0.21
SRSF4-202ENST00000466448 LYSMD2Q8IV50 215 aa13.72□□□□□ -0.21
SRSF4-202ENST00000466448 FAM24BQ8N5W8 94 aa13.72□□□□□ -0.21
SRSF4-202ENST00000466448 OR4A16Q8NH70 328 aa13.72□□□□□ -0.21
SRSF4-202ENST00000466448 GINS3Q9BRX5 216 aa13.72□□□□□ -0.21
SRSF4-202ENST00000466448 VPS13DQ5THJ4 4388 aa13.72□□□□□ -0.21
SRSF4-202ENST00000466448 IGHV3-66A0A0C4DH42 116 aa13.71□□□□□ -0.21
SRSF4-202ENST00000466448 IGLL5B9A064 214 aa13.71□□□□□ -0.21
SRSF4-202ENST00000466448 ST8SIA3O43173 380 aa13.71□□□□□ -0.21
SRSF4-202ENST00000466448 DFFBO76075 338 aa13.71□□□□□ -0.21
SRSF4-202ENST00000466448 IGKV1-39P01597 117 aa13.71□□□□□ -0.21
SRSF4-202ENST00000466448 IGKV1D-39P04432 117 aa13.71□□□□□ -0.21
SRSF4-202ENST00000466448 EIF4EP06730 217 aaKnown RBP13.71□□□□□ -0.21
SRSF4-202ENST00000466448 HRH1P35367 487 aa13.71□□□□□ -0.21
SRSF4-202ENST00000466448 H2BFWTQ7Z2G1 175 aa13.71□□□□□ -0.21
SRSF4-202ENST00000466448 TBC1D26Q86UD7 250 aa13.71□□□□□ -0.21
SRSF4-202ENST00000466448 Q8NAQ8 132 aa13.71□□□□□ -0.21
SRSF4-202ENST00000466448 FAM212BQ9NTI7 297 aaPredicted RBP13.71□□□□□ -0.21
SRSF4-202ENST00000466448 APLNQ9ULZ1 77 aa13.71□□□□□ -0.21
SRSF4-202ENST00000466448 DNASE2O00115 360 aaPredicted RBP13.7□□□□□ -0.22
SRSF4-202ENST00000466448 HLA-DMAP28067 261 aa13.7□□□□□ -0.22
SRSF4-202ENST00000466448 TGFBR1P36897 503 aa13.7□□□□□ -0.22
SRSF4-202ENST00000466448 SAMD12Q8N8I0 201 aa13.7□□□□□ -0.22
SRSF4-202ENST00000466448 HRH4Q9H3N8 390 aa13.7□□□□□ -0.22
SRSF4-202ENST00000466448 ZFAND3Q9H8U3 227 aa13.7□□□□□ -0.22
SRSF4-202ENST00000466448 TRAV2A0A0B4J234 112 aa13.69□□□□□ -0.22
SRSF4-202ENST00000466448 HSPE1P61604 102 aaKnown RBP13.69□□□□□ -0.22
SRSF4-202ENST00000466448 RPL11P62913 178 aaKnown RBP13.69□□□□□ -0.22
SRSF4-202ENST00000466448 MRGPRFQ96AM1 343 aa13.69□□□□□ -0.22
SRSF4-202ENST00000466448 PUS1Q9Y606 427 aaKnown RBP eCLIP13.69□□□□□ -0.22
SRSF4-202ENST00000466448 C11orf94C9JXX5 98 aa13.68□□□□□ -0.22
SRSF4-202ENST00000466448 GIG44P09565 113 aaPredicted RBP13.68□□□□□ -0.22
SRSF4-202ENST00000466448 S100GP29377 79 aa13.68□□□□□ -0.22
SRSF4-202ENST00000466448 PRSS3P35030 304 aa13.68□□□□□ -0.22
SRSF4-202ENST00000466448 NPBWR1P48145 328 aa13.68□□□□□ -0.22
SRSF4-202ENST00000466448 LSM3P62310 102 aaKnown RBP13.68□□□□□ -0.22
SRSF4-202ENST00000466448 SPINK9Q5DT21 86 aa13.68□□□□□ -0.22
SRSF4-202ENST00000466448 LPCAT3Q6P1A2 487 aa13.68□□□□□ -0.22
SRSF4-202ENST00000466448 STHQ8IWL8 128 aa13.68□□□□□ -0.22
SRSF4-202ENST00000466448 FUNDC2Q9BWH2 189 aa13.68□□□□□ -0.22
SRSF4-202ENST00000466448 RABAC1Q9UI14 185 aa13.68□□□□□ -0.22
SRSF4-202ENST00000466448 IGHV4-28A0A0C4DH34 117 aa13.67□□□□□ -0.22
SRSF4-202ENST00000466448 A0A1B0GU03 582 aa13.67□□□□□ -0.22
SRSF4-202ENST00000466448 RBMY1A1P0DJD3 496 aaKnown RBP13.67□□□□□ -0.22
SRSF4-202ENST00000466448 RBMY1CP0DJD4 496 aa13.67□□□□□ -0.22
SRSF4-202ENST00000466448 RPS19P39019 145 aaKnown RBP13.67□□□□□ -0.22
SRSF4-202ENST00000466448 TSPAN5P62079 268 aa13.67□□□□□ -0.22
SRSF4-202ENST00000466448 ERHP84090 104 aaKnown RBP13.67□□□□□ -0.22
SRSF4-202ENST00000466448 RBMY1FQ15415 496 aaKnown RBP13.67□□□□□ -0.22
SRSF4-202ENST00000466448 IZUMO4Q1ZYL8 232 aa13.67□□□□□ -0.22
SRSF4-202ENST00000466448 ZNF600Q6ZNG1 722 aa13.67□□□□□ -0.22
SRSF4-202ENST00000466448 DUSP18Q8NEJ0 188 aa13.67□□□□□ -0.22
SRSF4-202ENST00000466448 MRPS26Q9BYN8 205 aaKnown RBP13.67□□□□□ -0.22
SRSF4-202ENST00000466448 HLA-DMBP28068 263 aa13.66□□□□□ -0.22
SRSF4-202ENST00000466448 TRPT1Q86TN4 253 aaKnown RBP13.66□□□□□ -0.22
SRSF4-202ENST00000466448 GPX8Q8TED1 209 aa13.66□□□□□ -0.22
SRSF4-202ENST00000466448 TMEM50AO95807 157 aa13.65□□□□□ -0.22
SRSF4-202ENST00000466448 SMIM18P0DKX4 95 aa13.65□□□□□ -0.22
SRSF4-202ENST00000466448 Q6ZTC4 211 aa13.65□□□□□ -0.22
SRSF4-202ENST00000466448 TMEM231Q9H6L2 316 aa13.65□□□□□ -0.22
SRSF4-202ENST00000466448 MIFP14174 115 aa13.64□□□□□ -0.23
SRSF4-202ENST00000466448 C4BPBP20851 252 aa13.64□□□□□ -0.23
SRSF4-202ENST00000466448 SNCAP37840 140 aa13.64□□□□□ -0.23
SRSF4-202ENST00000466448 PVRIGQ6DKI7 326 aa13.64□□□□□ -0.23
SRSF4-202ENST00000466448 STXBP6Q8NFX7 210 aa13.64□□□□□ -0.23
SRSF4-202ENST00000466448 X6R8D5 127 aa13.64□□□□□ -0.23
SRSF4-202ENST00000466448 IGHV4-4A0A075B6R2 117 aa13.63□□□□□ -0.23
SRSF4-202ENST00000466448 ELOA3CA0A087WX78 387 aaPredicted RBP13.63□□□□□ -0.23
SRSF4-202ENST00000466448 KNCNA6PVL3 124 aa13.63□□□□□ -0.23
SRSF4-202ENST00000466448 ZNF705EA8MWA4 302 aaPredicted RBP13.63□□□□□ -0.23
SRSF4-202ENST00000466448 INS-IGF2F8WCM5 200 aa13.63□□□□□ -0.23
SRSF4-202ENST00000466448 K7EQG2 157 aa13.63□□□□□ -0.23
SRSF4-202ENST00000466448 IGKV1-5P01602 117 aa13.63□□□□□ -0.23
SRSF4-202ENST00000466448 SPP1P10451 314 aa13.63□□□□□ -0.23
SRSF4-202ENST00000466448 NPPCP23582 126 aa13.63□□□□□ -0.23
SRSF4-202ENST00000466448 UCP3P55916 312 aa13.63□□□□□ -0.23
SRSF4-202ENST00000466448 NCS1P62166 190 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms