RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 LNP1A1A4G5 178 aa10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 IGLL1P15814 213 aa10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 CT45A1Q5HYN5 189 aa10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 CT45A3Q8NHU0 189 aa10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 CLEC5AQ9NY25 188 aa10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 IDI2-AS1Q9NZ38 188 aa10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 ISLRO14498 428 aa10.29□□□□□ -0.76
CLCNKA-204ENST00000464764 CD46P15529 392 aa10.29□□□□□ -0.76
CLCNKA-204ENST00000464764 OR10W1Q8NGF6 305 aa10.29□□□□□ -0.76
CLCNKA-204ENST00000464764 DDB2Q92466 427 aa10.29□□□□□ -0.76
CLCNKA-204ENST00000464764 NEUROG1Q92886 237 aa10.29□□□□□ -0.76
CLCNKA-204ENST00000464764 IGF2BP2-AS1Q96M15 143 aa10.29□□□□□ -0.76
CLCNKA-204ENST00000464764 ZNF331Q9NQX6 463 aaPredicted RBP10.29□□□□□ -0.76
CLCNKA-204ENST00000464764 TRGV5A0A0B4J1U4 118 aa10.29□□□□□ -0.76
CLCNKA-204ENST00000464764 NKX6-3A6NJ46 265 aa10.29□□□□□ -0.76
CLCNKA-204ENST00000464764 CORTO00230 105 aa10.29□□□□□ -0.76
CLCNKA-204ENST00000464764 HLA-DQA1P01909 254 aa10.29□□□□□ -0.76
CLCNKA-204ENST00000464764 SAA2P0DJI9 122 aaPredicted RBP10.29□□□□□ -0.76
CLCNKA-204ENST00000464764 PYYP10082 97 aa10.29□□□□□ -0.76
CLCNKA-204ENST00000464764 LEMD1Q68G75 181 aa10.29□□□□□ -0.76
CLCNKA-204ENST00000464764 RNASEKQ6P5S7 137 aaKnown RBP10.29□□□□□ -0.76
CLCNKA-204ENST00000464764 TDHQ8IZJ6 230 aa10.29□□□□□ -0.76
CLCNKA-204ENST00000464764 TMEM14BQ9NUH8 114 aa10.29□□□□□ -0.76
CLCNKA-204ENST00000464764 OR51B2Q9Y5P1 312 aa10.29□□□□□ -0.76
CLCNKA-204ENST00000464764 LOC105371242A0A075B767 164 aa10.28□□□□□ -0.76
CLCNKA-204ENST00000464764 FAM90A9PA6NNJ1 464 aa10.28□□□□□ -0.76
CLCNKA-204ENST00000464764 SRRM4A7MD48 611 aaKnown RBP10.28□□□□□ -0.76
CLCNKA-204ENST00000464764 H0Y8G0 127 aa10.28□□□□□ -0.76
CLCNKA-204ENST00000464764 M0R2Z0 102 aa10.28□□□□□ -0.76
CLCNKA-204ENST00000464764 HSBP1O75506 76 aa10.28□□□□□ -0.76
CLCNKA-204ENST00000464764 PPOXP50336 477 aa10.28□□□□□ -0.76
CLCNKA-204ENST00000464764 SSBP2P81877 361 aaPredicted RBP10.28□□□□□ -0.76
CLCNKA-204ENST00000464764 ORAOV1Q8WV07 137 aa10.28□□□□□ -0.76
CLCNKA-204ENST00000464764 TMEM167BQ9NRX6 74 aa10.28□□□□□ -0.76
CLCNKA-204ENST00000464764 TRGV8A0A0C4DH27 118 aa10.28□□□□□ -0.76
CLCNKA-204ENST00000464764 VWC2LB2RUY7 222 aa10.28□□□□□ -0.76
CLCNKA-204ENST00000464764 IGKV1-16P04430 117 aa10.28□□□□□ -0.76
CLCNKA-204ENST00000464764 SELENOVP59797 346 aa10.28□□□□□ -0.76
CLCNKA-204ENST00000464764 MSMPQ1L6U9 139 aa10.28□□□□□ -0.76
CLCNKA-204ENST00000464764 COX11Q9Y6N1 276 aa10.28□□□□□ -0.76
CLCNKA-204ENST00000464764 IZUMO1RA6ND01 250 aa10.27□□□□□ -0.76
CLCNKA-204ENST00000464764 FAM181BA6NEQ2 426 aa10.27□□□□□ -0.76
CLCNKA-204ENST00000464764 ZNF891A8MT65 544 aaPredicted RBP10.27□□□□□ -0.76
CLCNKA-204ENST00000464764 J3QR06 171 aa10.27□□□□□ -0.76
CLCNKA-204ENST00000464764 CECR9P0C854 216 aa10.27□□□□□ -0.76
CLCNKA-204ENST00000464764 UBE2V1Q13404 147 aa10.27□□□□□ -0.76
CLCNKA-204ENST00000464764 NUP35Q8NFH5 326 aa10.27□□□□□ -0.76
CLCNKA-204ENST00000464764 OR4S2Q8NH73 311 aa10.27□□□□□ -0.76
CLCNKA-204ENST00000464764 OR2T6Q8NHC8 308 aa10.27□□□□□ -0.76
CLCNKA-204ENST00000464764 MCRIP2Q9BUT9 160 aaKnown RBP10.27□□□□□ -0.76
CLCNKA-204ENST00000464764 ABI3Q9P2A4 366 aa10.27□□□□□ -0.76
CLCNKA-204ENST00000464764 JPT1Q9UK76 154 aa10.27□□□□□ -0.76
CLCNKA-204ENST00000464764 PLXNB1O43157 2135 aa10.27□□□□□ -0.77
CLCNKA-204ENST00000464764 CBY3A6NI87 242 aa10.27□□□□□ -0.77
CLCNKA-204ENST00000464764 PRB4P10163 310 aaPredicted RBP10.27□□□□□ -0.77
CLCNKA-204ENST00000464764 VWA1Q6PCB0 445 aa10.27□□□□□ -0.77
CLCNKA-204ENST00000464764 TRAT1Q6PIZ9 186 aa10.27□□□□□ -0.77
CLCNKA-204ENST00000464764 LINC00173Q6ZV60 143 aa10.27□□□□□ -0.77
CLCNKA-204ENST00000464764 KLHDC1Q8N7A1 406 aa10.27□□□□□ -0.77
CLCNKA-204ENST00000464764 OR4F17Q8NGA8 305 aa10.27□□□□□ -0.77
CLCNKA-204ENST00000464764 TNFRSF19Q9NS68 423 aa10.27□□□□□ -0.77
CLCNKA-204ENST00000464764 CALYQ9NYX4 217 aa10.27□□□□□ -0.77
CLCNKA-204ENST00000464764 NAV3Q8IVL0 2385 aa10.27□□□□□ -0.77
CLCNKA-204ENST00000464764 YLPM1P49750 1951 aaKnown RBP10.27□□□□□ -0.77
CLCNKA-204ENST00000464764 PLAUP00749 431 aa10.27□□□□□ -0.77
CLCNKA-204ENST00000464764 TRIB1Q96RU8 372 aa10.27□□□□□ -0.77
CLCNKA-204ENST00000464764 SPRY4Q9C004 299 aa10.27□□□□□ -0.77
CLCNKA-204ENST00000464764 BET1LQ9NYM9 111 aa10.27□□□□□ -0.77
CLCNKA-204ENST00000464764 SLC25A10Q9UBX3 287 aaPredicted RBP10.27□□□□□ -0.77
CLCNKA-204ENST00000464764 KLRC4-KLRK1H3BQV0 150 aa10.26□□□□□ -0.77
CLCNKA-204ENST00000464764 J3QW42 95 aa10.26□□□□□ -0.77
CLCNKA-204ENST00000464764 MMP23AO75900 390 aa10.26□□□□□ -0.77
CLCNKA-204ENST00000464764 VAMP3Q15836 100 aa10.26□□□□□ -0.77
CLCNKA-204ENST00000464764 C19orf35Q6ZS72 473 aa10.26□□□□□ -0.77
CLCNKA-204ENST00000464764 SNRNP40Q96DI7 357 aaKnown RBP10.26□□□□□ -0.77
CLCNKA-204ENST00000464764 ZC2HC1AQ96GY0 325 aa10.26□□□□□ -0.77
CLCNKA-204ENST00000464764 SLC25A33Q9BSK2 321 aa10.26□□□□□ -0.77
CLCNKA-204ENST00000464764 FOXA2Q9Y261 457 aaPredicted RBP10.26□□□□□ -0.77
CLCNKA-204ENST00000464764 IGHV2-26A0A0B4J1V2 119 aa10.26□□□□□ -0.77
CLCNKA-204ENST00000464764 FOXA3P55318 350 aaPredicted RBP10.26□□□□□ -0.77
CLCNKA-204ENST00000464764 GNG5P63218 68 aa10.26□□□□□ -0.77
CLCNKA-204ENST00000464764 RPL19P84098 196 aaKnown RBP10.26□□□□□ -0.77
CLCNKA-204ENST00000464764 GCSAMQ8N6F7 178 aa10.26□□□□□ -0.77
CLCNKA-204ENST00000464764 ZNF738Q8NE65 137 aa10.26□□□□□ -0.77
CLCNKA-204ENST00000464764 NUDT10Q8NFP7 164 aa10.26□□□□□ -0.77
CLCNKA-204ENST00000464764 NUDT11Q96G61 164 aa10.26□□□□□ -0.77
CLCNKA-204ENST00000464764 ALKBH7Q9BT30 221 aaPredicted RBP10.26□□□□□ -0.77
CLCNKA-204ENST00000464764 KLF13Q9Y2Y9 288 aaPredicted RBP10.26□□□□□ -0.77
CLCNKA-204ENST00000464764 TRAV9-2A0A087WT02 112 aa10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 C2orf70A6NJV1 201 aa10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 KLF3P57682 345 aaPredicted RBP10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 UBE2L3P68036 154 aaKnown RBP10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 C17orf58Q2M2W7 97 aa10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 MDS2Q8NDY4 140 aa10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 DEFB108BQ8NET1 73 aa10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 RND1Q92730 232 aa10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 LOXL4Q96JB6 756 aa10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 OR8B2Q96RD0 313 aa10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 PLCE1Q9P212 2302 aa10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 INO80CQ6PI98 192 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms