RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 SS18Q15532 418 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 FAM27BQ5VT28 67 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 LCA10Q71F78 164 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 SMIM15Q7Z3B0 74 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 DYNAPQ8N1N2 210 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 RPP25LQ8N5L8 163 aaKnown RBP1.91□□□□□ -2.1
GPNMB-205ENST00000463011 OR52R1Q8NGF1 315 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 OR4X2Q8NGF9 303 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 TERB2Q8NHR7 220 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 ZHX1-C8orf76Q96EF9 292 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 C2orf50Q96LR7 162 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 BOLA2Q9H3K6 86 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 ZSWIM8A7E2V4 1837 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 SHANK1Q9Y566 2161 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 ZNF638Q14966 1978 aaKnown RBP1.9□□□□□ -2.1
GPNMB-205ENST00000463011 TRBV19A0A075B6N1 114 aa1.9□□□□□ -2.11
GPNMB-205ENST00000463011 A0A1B0GV72 72 aa1.9□□□□□ -2.11
GPNMB-205ENST00000463011 BANF1O75531 89 aa1.9□□□□□ -2.11
GPNMB-205ENST00000463011 NDUFC2O95298 119 aa1.9□□□□□ -2.11
GPNMB-205ENST00000463011 IFNA7P01567 189 aa1.9□□□□□ -2.11
GPNMB-205ENST00000463011 SPI1P17947 270 aa1.9□□□□□ -2.11
GPNMB-205ENST00000463011 PHBP35232 272 aa1.9□□□□□ -2.11
GPNMB-205ENST00000463011 ERHP84090 104 aaKnown RBP1.9□□□□□ -2.11
GPNMB-205ENST00000463011 AKR1C8PQ5T2L2 129 aa1.9□□□□□ -2.11
GPNMB-205ENST00000463011 LYRM7Q5U5X0 104 aa1.9□□□□□ -2.11
GPNMB-205ENST00000463011 MIR17HGQ75NE6 70 aa1.9□□□□□ -2.11
GPNMB-205ENST00000463011 TCF24Q7RTU0 167 aa1.9□□□□□ -2.11
GPNMB-205ENST00000463011 SCGB3A1Q96QR1 104 aa1.9□□□□□ -2.11
GPNMB-205ENST00000463011 Q9BRP9 147 aa1.9□□□□□ -2.11
GPNMB-205ENST00000463011 GINS4Q9BRT9 223 aa1.9□□□□□ -2.11
GPNMB-205ENST00000463011 NDUFB11Q9NX14 153 aa1.9□□□□□ -2.11
GPNMB-205ENST00000463011 AMMECR1Q9Y4X0 333 aaPredicted RBP1.9□□□□□ -2.11
GPNMB-205ENST00000463011 RALGAPA2Q2PPJ7 1873 aa1.9□□□□□ -2.11
GPNMB-205ENST00000463011 PBRM1Q86U86 1689 aa1.9□□□□□ -2.11
GPNMB-205ENST00000463011 SYNMO15061 1565 aa1.89□□□□□ -2.11
GPNMB-205ENST00000463011 IGHV3-64A0A075B6Q5 118 aa1.89□□□□□ -2.11
GPNMB-205ENST00000463011 TMSB15BA0A087X1C1 80 aa1.89□□□□□ -2.11
GPNMB-205ENST00000463011 IGHV1-18A0A0C4DH31 117 aa1.89□□□□□ -2.11
GPNMB-205ENST00000463011 PPP5D1E7EU14 171 aa1.89□□□□□ -2.11
GPNMB-205ENST00000463011 H7C1C5 153 aa1.89□□□□□ -2.11
GPNMB-205ENST00000463011 PEBP1P30086 187 aaKnown RBP1.89□□□□□ -2.11
GPNMB-205ENST00000463011 TMEM258P61165 79 aa1.89□□□□□ -2.11
GPNMB-205ENST00000463011 LCN6P62502 163 aa1.89□□□□□ -2.11
GPNMB-205ENST00000463011 HES1Q14469 280 aa1.89□□□□□ -2.11
GPNMB-205ENST00000463011 TSNQ15631 228 aaKnown RBP1.89□□□□□ -2.11
GPNMB-205ENST00000463011 LINC01554Q52M75 96 aa1.89□□□□□ -2.11
GPNMB-205ENST00000463011 KTN1-AS1Q86SY8 53 aa1.89□□□□□ -2.11
GPNMB-205ENST00000463011 AKAP14Q86UN6 197 aa1.89□□□□□ -2.11
GPNMB-205ENST00000463011 HIST3H2BBQ8N257 126 aa1.89□□□□□ -2.11
GPNMB-205ENST00000463011 EXOC3-AS1Q8N2X6 119 aa1.89□□□□□ -2.11
GPNMB-205ENST00000463011 STX19Q8N4C7 294 aa1.89□□□□□ -2.11
GPNMB-205ENST00000463011 Q8NDZ9 215 aa1.89□□□□□ -2.11
GPNMB-205ENST00000463011 PBDC1Q9BVG4 233 aa1.89□□□□□ -2.11
GPNMB-205ENST00000463011 CHST6Q9GZX3 395 aa1.89□□□□□ -2.11
GPNMB-205ENST00000463011 SH3BGRL3Q9H299 93 aa1.89□□□□□ -2.11
GPNMB-205ENST00000463011 CENPHQ9H3R5 247 aa1.89□□□□□ -2.11
GPNMB-205ENST00000463011 LYRM2Q9NU23 88 aaPredicted RBP1.89□□□□□ -2.11
GPNMB-205ENST00000463011 SSR3Q9UNL2 185 aa1.89□□□□□ -2.11
GPNMB-205ENST00000463011 SLC35A3Q9Y2D2 325 aa1.89□□□□□ -2.11
GPNMB-205ENST00000463011 CACNA1DQ01668 2161 aa1.89□□□□□ -2.11
GPNMB-205ENST00000463011 TOPBP1Q92547 1522 aa1.88□□□□□ -2.11
GPNMB-205ENST00000463011 NOTCH2Q04721 2471 aa1.88□□□□□ -2.11
GPNMB-205ENST00000463011 A0A0D9SEW6 157 aa1.88□□□□□ -2.11
GPNMB-205ENST00000463011 TRBV10-2A0A0K0K1G8 114 aa1.88□□□□□ -2.11
GPNMB-205ENST00000463011 J3QQQ9 107 aa1.88□□□□□ -2.11
GPNMB-205ENST00000463011 CYB5BO43169 146 aa1.88□□□□□ -2.11
GPNMB-205ENST00000463011 CST8O60676 142 aa1.88□□□□□ -2.11
GPNMB-205ENST00000463011 IGKV1-16P04430 117 aa1.88□□□□□ -2.11
GPNMB-205ENST00000463011 RPSAP08865 295 aaKnown RBP1.88□□□□□ -2.11
GPNMB-205ENST00000463011 IDO1P14902 403 aa1.88□□□□□ -2.11
GPNMB-205ENST00000463011 LGALS3P17931 250 aaKnown RBP1.88□□□□□ -2.11
GPNMB-205ENST00000463011 NFYAP23511 347 aaPredicted RBP1.88□□□□□ -2.11
GPNMB-205ENST00000463011 RPL26P61254 145 aaKnown RBP1.88□□□□□ -2.11
GPNMB-205ENST00000463011 RELAQ04206 551 aa1.88□□□□□ -2.11
GPNMB-205ENST00000463011 ZNF791Q3KP31 576 aaPredicted RBP1.88□□□□□ -2.11
GPNMB-205ENST00000463011 GRINAQ7Z429 371 aa1.88□□□□□ -2.11
GPNMB-205ENST00000463011 TRAPPC6BQ86SZ2 158 aa1.88□□□□□ -2.11
GPNMB-205ENST00000463011 LRRC28Q86X40 367 aaPredicted RBP1.88□□□□□ -2.11
GPNMB-205ENST00000463011 SIGLECL1Q8N7X8 197 aa1.88□□□□□ -2.11
GPNMB-205ENST00000463011 PFN4Q8NHR9 129 aa1.88□□□□□ -2.11
GPNMB-205ENST00000463011 DNAJC30Q96LL9 226 aa1.88□□□□□ -2.11
GPNMB-205ENST00000463011 GPER1Q99527 375 aa1.88□□□□□ -2.11
GPNMB-205ENST00000463011 OSTCQ9NRP0 149 aa1.88□□□□□ -2.11
GPNMB-205ENST00000463011 ACER3Q9NUN7 267 aa1.88□□□□□ -2.11
GPNMB-205ENST00000463011 SMPXQ9UHP9 88 aa1.88□□□□□ -2.11
GPNMB-205ENST00000463011 RPL26L1Q9UNX3 145 aaKnown RBP1.88□□□□□ -2.11
GPNMB-205ENST00000463011 DOCK5Q9H7D0 1870 aa1.88□□□□□ -2.11
GPNMB-205ENST00000463011 ANKRD30AQ9BXX3 1397 aa1.87□□□□□ -2.11
GPNMB-205ENST00000463011 KDM5BQ9UGL1 1544 aa1.87□□□□□ -2.11
GPNMB-205ENST00000463011 SLX4Q8IY92 1834 aa1.87□□□□□ -2.11
GPNMB-205ENST00000463011 ZNF860A6NHJ4 632 aa1.87□□□□□ -2.11
GPNMB-205ENST00000463011 HMSDA8MTL9 139 aa1.87□□□□□ -2.11
GPNMB-205ENST00000463011 GPR31O00270 319 aa1.87□□□□□ -2.11
GPNMB-205ENST00000463011 IFNA21P01568 189 aa1.87□□□□□ -2.11
GPNMB-205ENST00000463011 CRHP06850 196 aa1.87□□□□□ -2.11
GPNMB-205ENST00000463011 TRGC1P0CF51 173 aa1.87□□□□□ -2.11
GPNMB-205ENST00000463011 GLRXP35754 106 aa1.87□□□□□ -2.11
GPNMB-205ENST00000463011 YPEL3P61236 119 aaPredicted RBP1.87□□□□□ -2.11
GPNMB-205ENST00000463011 ZNF181Q2M3W8 571 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms