RNA–Protein interactions for RNA: ENST00000462429.1

VPS41-210, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 3

Gene VPS41, Length 347 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-210ENST00000462429 GNG8Q9UK08 70 aa2.26□□□□□ -2.05
VPS41-210ENST00000462429 KNL1Q8NG31 2342 aa2.26□□□□□ -2.05
VPS41-210ENST00000462429 PI4KAP42356 2102 aa2.26□□□□□ -2.05
VPS41-210ENST00000462429 TRANK1O15050 2925 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 IGHV1-45A0A0A0MS14 117 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 A0A0A6YYH2 397 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 A6NJ64 397 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 ZNF98A6NK75 572 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 IFITM5A6NNB3 132 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 OR2AT4A6NND4 320 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 HSBP1L1C9JCN9 74 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 LRRN3E7EW58 273 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 KLRC4-KLRK1H3BQV0 150 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 M0R129 80 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 AIPO00170 330 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 PLPP3O14495 311 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 GPR171O14626 319 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 NDUFS6O75380 124 aaKnown RBP2.25□□□□□ -2.05
VPS41-210ENST00000462429 OR2J2O76002 312 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 NRASP01111 189 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 HRASP01112 189 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 KRASP01116 189 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 LHBP01229 141 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 ISG15P05161 165 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 UCHL1P09936 223 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 TRAPPC2P0DI81 140 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 TRAPPC2BP0DI82 140 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 ALOX5APP20292 161 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 HSD11B1P28845 292 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 GRPRP30550 384 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 FXYD6P3P58550 94 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 PCBD1P61457 104 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 RPS25P62851 125 aaKnown RBP2.25□□□□□ -2.05
VPS41-210ENST00000462429 FABP5Q01469 135 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 MEF2CQ06413 473 aaPredicted RBP2.25□□□□□ -2.05
VPS41-210ENST00000462429 CDK5R1Q15078 307 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 NDUFA5Q16718 116 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 ZNF791Q3KP31 576 aaPredicted RBP2.25□□□□□ -2.05
VPS41-210ENST00000462429 UBE2NLQ5JXB2 153 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 PRR9Q5T870 116 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 SFXN4Q6P4A7 337 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 MORN3Q6PF18 240 aaPredicted RBP2.25□□□□□ -2.05
VPS41-210ENST00000462429 TMPPEQ6ZT21 453 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
VPS41-210ENST00000462429 FA2HQ7L5A8 372 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 AKAP14Q86UN6 197 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 PLCZ1Q86YW0 608 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 SGPP2Q8IWX5 399 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 OR5D14Q8NGL3 314 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 OR2K2Q8NGT1 345 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 OR6K3Q8NGY3 331 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 OTOSQ8NHW6 89 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 ITLN2Q8WWU7 325 aaPredicted RBP2.25□□□□□ -2.05
VPS41-210ENST00000462429 TMEM106AQ96A25 262 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 SLC25A44Q96H78 314 aaPredicted RBP2.25□□□□□ -2.05
VPS41-210ENST00000462429 Q96M85 177 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 LINC01587Q99440 93 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 S100A13Q99584 98 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 TBX5Q99593 518 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 ABCB9Q9NP78 766 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 TMEM38BQ9NVV0 291 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 EMC3Q9P0I2 261 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 ZNF391Q9UJN7 358 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 DKKL1Q9UK85 242 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 HHLA2Q9UM44 414 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 BOKQ9UMX3 212 aaPredicted RBP2.25□□□□□ -2.05
VPS41-210ENST00000462429 POLR1DQ9Y2S0 133 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 CACNA1EQ15878 2313 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 CHD7Q9P2D1 2997 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 RP1P56715 2156 aa2.25□□□□□ -2.05
VPS41-210ENST00000462429 IGKV1D-42A0A075B6H8 117 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 PIGBOS1A0A0B4J2F0 54 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 TMEM269A0A1B0GVZ9 245 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 C16orf90A8MZG2 172 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 ZNF878C9JN71 531 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 GABARAPH6UMI1 98 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 SULT1C2O00338 296 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 LYRM1O43325 122 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 HPGDSO60760 199 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 RPP14O95059 124 aaKnown RBP2.24□□□□□ -2.05
VPS41-210ENST00000462429 BRI3O95415 125 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 CLPSP04118 112 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 SERPINA7P05543 415 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 GYPBP06028 91 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 UBBP0CG47 229 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 PSKH1P11801 424 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 IL7P13232 177 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 HLA-DMAP28067 261 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 EIF2B2P49770 351 aaKnown RBP2.24□□□□□ -2.05
VPS41-210ENST00000462429 ACTBP60709 375 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 TSPAN5P62079 268 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 LSM6P62312 80 aaKnown RBP2.24□□□□□ -2.05
VPS41-210ENST00000462429 ACTG1P63261 375 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 MRPS15P82914 257 aaKnown RBP2.24□□□□□ -2.05
VPS41-210ENST00000462429 PLPPR5Q32ZL2 321 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 TMEM176BQ3YBM2 270 aaPredicted RBP2.24□□□□□ -2.05
VPS41-210ENST00000462429 MESTQ5EB52 335 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 OR10J3Q5JRS4 329 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 TMEM69Q5SWH9 247 aa2.24□□□□□ -2.05
VPS41-210ENST00000462429 KPRPQ5T749 579 aaPredicted RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms