RNA–Protein interactions for RNA: ENST00000461489.1

COL21A1-205, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 4

Gene COL21A1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-205ENST00000461489 SMR3AQ99954 134 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 B9D2Q9BPU9 175 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 DCUN1D5Q9BTE7 237 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 PECRQ9BY49 303 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 GABARAPL3Q9BY60 117 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 SIRPDQ9H106 197 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 ABCG5Q9H222 651 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 PPDPFQ9H3Y8 114 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 RNF167Q9H6Y7 350 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 HMG20AQ9NP66 347 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 IFT46Q9NQC8 304 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 OR2S2Q9NQN1 319 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 SLC39A9Q9NUM3 307 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 BABAM2Q9NXR7 383 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 CALYQ9NYX4 217 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 SIGLEC8Q9NYZ4 499 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 NDUFA13Q9P0J0 144 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 KIF25Q9UIL4 384 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 SSR3Q9UNL2 185 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 KCNIP3Q9Y2W7 256 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 RHBDD3Q9Y3P4 386 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 U3KQV3 271 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 V9GYS6 101 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 CELSR3Q9NYQ7 3312 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 LAMA1P25391 3075 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 NCOA6Q14686 2063 aaPredicted RBP1.58□□□□□ -2.16
COL21A1-205ENST00000461489 MYO7BQ6PIF6 2116 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 SHANK1Q9Y566 2161 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 FLNCQ14315 2725 aa1.58□□□□□ -2.16
COL21A1-205ENST00000461489 CSPG4Q6UVK1 2322 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 ANKRD12Q6UB98 2062 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 MGAQ8IWI9 3026 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 NBPF19A0A087WUL8 3843 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 TRAV41A0A0B4J266 112 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 LOC100130705A0A1B0GUX0 176 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 PQLC2LA1A4F0 135 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 TVP23AA6NH52 213 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 CENPXA8MT69 81 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 SEC14L6B5MCN3 397 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 LRRN3E7EW58 273 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 K7EP13 123 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 M0R129 80 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 SIRPB1O00241 398 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 CDC42EP2O14613 210 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 RBFOX2O43251 390 aaKnown RBP eCLIP1.57□□□□□ -2.16
COL21A1-205ENST00000461489 SYNGR1O43759 233 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 SOX15O60248 233 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 ENTPD6O75354 484 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 TNFAIP8O95379 198 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 SOX14O95416 240 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 OR2H2O95918 312 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 IGKV1D-33P01593 117 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 IGKV1-33P01594 117 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 IGF1P05019 195 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 CDK1P06493 297 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 SERPINE2P07093 398 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 UCHL1P09936 223 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 SRMP19623 302 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 SERPINA2P20848 420 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 PTNP21246 168 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 DTYMKP23919 212 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 GNRHRP30968 328 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 SNCAP37840 140 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 ZNF137PP52743 207 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 EFNB2P52799 333 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 RBM11P57052 281 aaKnown RBP1.57□□□□□ -2.16
COL21A1-205ENST00000461489 GNG2P59768 71 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 TSPAN5P62079 268 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 SNRPD3P62318 126 aaKnown RBP1.57□□□□□ -2.16
COL21A1-205ENST00000461489 RAB11AP62491 216 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 RPL23AP62750 156 aaKnown RBP1.57□□□□□ -2.16
COL21A1-205ENST00000461489 RUNX1Q01196 453 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 SSBP1Q04837 148 aaKnown RBP1.57□□□□□ -2.16
COL21A1-205ENST00000461489 ATP5G2Q06055 141 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 RAB31Q13636 194 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 EXOSC2Q13868 293 aaKnown RBP1.57□□□□□ -2.16
COL21A1-205ENST00000461489 ATXN7L3Q14CW9 347 aaPredicted RBP1.57□□□□□ -2.16
COL21A1-205ENST00000461489 PSG5Q15238 335 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 TRIM16LQ309B1 348 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 PHYHD1Q5SRE7 291 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 KDM4DQ6B0I6 523 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 CD200R1LQ6Q8B3 271 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 SLC25A48Q6ZT89 311 aaKnown RBP1.57□□□□□ -2.16
COL21A1-205ENST00000461489 MSRB3Q8IXL7 192 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 PDZD9Q8IXQ8 264 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 STPG2Q8N412 459 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 RNF148Q8N7C7 305 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 LRRC75AQ8NAA5 344 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 OR1N2Q8NGR9 330 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 OR13C9Q8NGT0 318 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 OR2G2Q8NGZ5 317 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 OR5B3Q8NH48 314 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 OR2AE1Q8NHA4 323 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 CNIH3Q8TBE1 160 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 CANT1Q8WVQ1 401 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 RGP1Q92546 391 aaPredicted RBP1.57□□□□□ -2.16
COL21A1-205ENST00000461489 ARPC1AQ92747 370 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 RORBQ92753 470 aa1.57□□□□□ -2.16
COL21A1-205ENST00000461489 RPL3LQ92901 407 aaKnown RBP1.57□□□□□ -2.16
COL21A1-205ENST00000461489 S100A16Q96FQ6 103 aaKnown RBP1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms