RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 TMED3Q9Y3Q3 217 aa10.15□□□□□ -0.78
RAB11FIP3-207ENST00000461009 LSM4Q9Y4Z0 139 aaKnown RBP10.15□□□□□ -0.78
RAB11FIP3-207ENST00000461009 SMAD5-AS1Q9Y6J3 95 aa10.15□□□□□ -0.78
RAB11FIP3-207ENST00000461009 DNAH3Q8TD57 4116 aa10.15□□□□□ -0.78
RAB11FIP3-207ENST00000461009 C9orf170A2RU37 121 aa10.14□□□□□ -0.79
RAB11FIP3-207ENST00000461009 CEBPZOSA8MTT3 80 aa10.14□□□□□ -0.79
RAB11FIP3-207ENST00000461009 CORTO00230 105 aa10.14□□□□□ -0.79
RAB11FIP3-207ENST00000461009 TRBV12-3P01733 135 aa10.14□□□□□ -0.79
RAB11FIP3-207ENST00000461009 IGHV3-23P01764 117 aa10.14□□□□□ -0.79
RAB11FIP3-207ENST00000461009 HLA-AP01891 365 aaKnown RBP10.14□□□□□ -0.79
RAB11FIP3-207ENST00000461009 TCRBP04435 133 aa10.14□□□□□ -0.79
RAB11FIP3-207ENST00000461009 CLEC3BP05452 202 aa10.14□□□□□ -0.79
RAB11FIP3-207ENST00000461009 OR4E1P0C645 316 aa10.14□□□□□ -0.79
RAB11FIP3-207ENST00000461009 SLC25A6P12236 298 aa10.14□□□□□ -0.79
RAB11FIP3-207ENST00000461009 ARL3P36405 182 aa10.14□□□□□ -0.79
RAB11FIP3-207ENST00000461009 ASAH1Q13510 395 aa10.14□□□□□ -0.79
RAB11FIP3-207ENST00000461009 ANKRD55Q3KP44 614 aa10.14□□□□□ -0.79
RAB11FIP3-207ENST00000461009 NMSQ5H8A3 153 aa10.14□□□□□ -0.79
RAB11FIP3-207ENST00000461009 ACSM6Q6P461 480 aa10.14□□□□□ -0.79
RAB11FIP3-207ENST00000461009 LYG2Q86SG7 212 aa10.14□□□□□ -0.79
RAB11FIP3-207ENST00000461009 OR1S1Q8NH92 325 aa10.14□□□□□ -0.79
RAB11FIP3-207ENST00000461009 HIPK2Q9H2X6 1198 aa10.14□□□□□ -0.79
RAB11FIP3-207ENST00000461009 HEYLQ9NQ87 328 aaPredicted RBP10.14□□□□□ -0.79
RAB11FIP3-207ENST00000461009 MFSD2BA6NFX1 497 aa10.13□□□□□ -0.79
RAB11FIP3-207ENST00000461009 BMPR1BO00238 502 aa10.13□□□□□ -0.79
RAB11FIP3-207ENST00000461009 IFNA21P01568 189 aa10.13□□□□□ -0.79
RAB11FIP3-207ENST00000461009 HTR2BP41595 481 aa10.13□□□□□ -0.79
RAB11FIP3-207ENST00000461009 SYNJ2BPP57105 145 aa10.13□□□□□ -0.79
RAB11FIP3-207ENST00000461009 FAM106AQ4KMX7 169 aa10.13□□□□□ -0.79
RAB11FIP3-207ENST00000461009 PLET1Q6UQ28 207 aa10.13□□□□□ -0.79
RAB11FIP3-207ENST00000461009 NOXA1Q86UR1 476 aa10.13□□□□□ -0.79
RAB11FIP3-207ENST00000461009 ZNF502Q8TBZ5 544 aa10.13□□□□□ -0.79
RAB11FIP3-207ENST00000461009 MISP3Q96FF7 219 aa10.13□□□□□ -0.79
RAB11FIP3-207ENST00000461009 C20orf85Q9H1P6 137 aa10.13□□□□□ -0.79
RAB11FIP3-207ENST00000461009 C21orf62Q9NYP8 219 aa10.13□□□□□ -0.79
RAB11FIP3-207ENST00000461009 PEMTQ9UBM1 199 aa10.13□□□□□ -0.79
RAB11FIP3-207ENST00000461009 DMRT1Q9Y5R6 373 aa10.13□□□□□ -0.79
RAB11FIP3-207ENST00000461009 S4R3C0 116 aa10.13□□□□□ -0.79
RAB11FIP3-207ENST00000461009 U3KQK5 164 aa10.13□□□□□ -0.79
RAB11FIP3-207ENST00000461009 PPP5D1E7EU14 171 aa10.12□□□□□ -0.79
RAB11FIP3-207ENST00000461009 HOXB5P09067 269 aa10.12□□□□□ -0.79
RAB11FIP3-207ENST00000461009 H2AFB2P0C5Z0 115 aa10.12□□□□□ -0.79
RAB11FIP3-207ENST00000461009 ANXA7P20073 488 aaKnown RBP10.12□□□□□ -0.79
RAB11FIP3-207ENST00000461009 MFAP2P55001 183 aa10.12□□□□□ -0.79
RAB11FIP3-207ENST00000461009 MFAP4P55083 255 aa10.12□□□□□ -0.79
RAB11FIP3-207ENST00000461009 DEFA1P59665 94 aa10.12□□□□□ -0.79
RAB11FIP3-207ENST00000461009 DEFA3P59666 94 aa10.12□□□□□ -0.79
RAB11FIP3-207ENST00000461009 TNFRSF9Q07011 255 aa10.12□□□□□ -0.79
RAB11FIP3-207ENST00000461009 DHRS2Q13268 280 aa10.12□□□□□ -0.79
RAB11FIP3-207ENST00000461009 SPSB3Q6PJ21 355 aa10.12□□□□□ -0.79
RAB11FIP3-207ENST00000461009 GPHB5Q86YW7 130 aa10.12□□□□□ -0.79
RAB11FIP3-207ENST00000461009 SCARB1Q8WTV0 552 aa10.12□□□□□ -0.79
RAB11FIP3-207ENST00000461009 CCDC140Q96MF4 163 aa10.12□□□□□ -0.79
RAB11FIP3-207ENST00000461009 TXN2Q99757 166 aa10.12□□□□□ -0.79
RAB11FIP3-207ENST00000461009 HSPB7Q9UBY9 170 aa10.12□□□□□ -0.79
RAB11FIP3-207ENST00000461009 TRAV6A0A075B6T7 132 aa10.11□□□□□ -0.79
RAB11FIP3-207ENST00000461009 FAM90A26D6RGX4 464 aa10.11□□□□□ -0.79
RAB11FIP3-207ENST00000461009 K7EIM0 57 aa10.11□□□□□ -0.79
RAB11FIP3-207ENST00000461009 MED6O75586 246 aa10.11□□□□□ -0.79
RAB11FIP3-207ENST00000461009 OR2C1O95371 312 aa10.11□□□□□ -0.79
RAB11FIP3-207ENST00000461009 MT-CO2P00403 227 aa10.11□□□□□ -0.79
RAB11FIP3-207ENST00000461009 RNASE2P10153 161 aaKnown RBP10.11□□□□□ -0.79
RAB11FIP3-207ENST00000461009 GP9P14770 177 aa10.11□□□□□ -0.79
RAB11FIP3-207ENST00000461009 GPR183P32249 361 aa10.11□□□□□ -0.79
RAB11FIP3-207ENST00000461009 Q56UQ5 140 aa10.11□□□□□ -0.79
RAB11FIP3-207ENST00000461009 GGNBP1Q5YKI7 109 aa10.11□□□□□ -0.79
RAB11FIP3-207ENST00000461009 OR9G4Q8NGQ1 327 aa10.11□□□□□ -0.79
RAB11FIP3-207ENST00000461009 ENKURQ8TC29 256 aa10.11□□□□□ -0.79
RAB11FIP3-207ENST00000461009 BSCL2Q96G97 398 aaPredicted RBP10.11□□□□□ -0.79
RAB11FIP3-207ENST00000461009 NUDT15Q9NV35 164 aa10.11□□□□□ -0.79
RAB11FIP3-207ENST00000461009 TBC1D24Q9ULP9 559 aa10.11□□□□□ -0.79
RAB11FIP3-207ENST00000461009 U3KQ87 197 aa10.11□□□□□ -0.79
RAB11FIP3-207ENST00000461009 SORL1Q92673 2214 aa10.11□□□□□ -0.79
RAB11FIP3-207ENST00000461009 IGHV3-21A0A0B4J1V1 117 aa10.1□□□□□ -0.79
RAB11FIP3-207ENST00000461009 I3L2K1 104 aa10.1□□□□□ -0.79
RAB11FIP3-207ENST00000461009 LGALS9O00182 355 aa10.1□□□□□ -0.79
RAB11FIP3-207ENST00000461009 PITX3O75364 302 aa10.1□□□□□ -0.79
RAB11FIP3-207ENST00000461009 SPNP16150 400 aa10.1□□□□□ -0.79
RAB11FIP3-207ENST00000461009 NPBWR1P48145 328 aa10.1□□□□□ -0.79
RAB11FIP3-207ENST00000461009 ATP5IP56385 69 aaPredicted RBP10.1□□□□□ -0.79
RAB11FIP3-207ENST00000461009 UBAC2Q8NBM4 344 aa10.1□□□□□ -0.79
RAB11FIP3-207ENST00000461009 DUSP18Q8NEJ0 188 aa10.1□□□□□ -0.79
RAB11FIP3-207ENST00000461009 MITD1Q8WV92 249 aa10.1□□□□□ -0.79
RAB11FIP3-207ENST00000461009 PINX1Q96BK5 328 aaKnown RBP10.1□□□□□ -0.79
RAB11FIP3-207ENST00000461009 ASCL2Q99929 193 aa10.1□□□□□ -0.79
RAB11FIP3-207ENST00000461009 RBKSQ9H477 322 aa10.1□□□□□ -0.79
RAB11FIP3-207ENST00000461009 PALMDQ9NP74 551 aa10.1□□□□□ -0.79
RAB11FIP3-207ENST00000461009 RPS10-NUDT3A0A1W2PQS6 291 aa10.09□□□□□ -0.79
RAB11FIP3-207ENST00000461009 ZNF320A2RRD8 509 aa10.09□□□□□ -0.79
RAB11FIP3-207ENST00000461009 OR2T8A6NH00 312 aa10.09□□□□□ -0.79
RAB11FIP3-207ENST00000461009 NUPL2O15504 423 aaKnown RBP10.09□□□□□ -0.79
RAB11FIP3-207ENST00000461009 TGOLN2O43493 480 aa10.09□□□□□ -0.79
RAB11FIP3-207ENST00000461009 SCGB2A1O75556 95 aa10.09□□□□□ -0.79
RAB11FIP3-207ENST00000461009 NXPH3O95157 252 aa10.09□□□□□ -0.79
RAB11FIP3-207ENST00000461009 IFNA10P01566 189 aa10.09□□□□□ -0.79
RAB11FIP3-207ENST00000461009 FCGR2BP31994 310 aaPredicted RBP10.09□□□□□ -0.79
RAB11FIP3-207ENST00000461009 RPP30P78346 268 aaKnown RBP10.09□□□□□ -0.79
RAB11FIP3-207ENST00000461009 BSXQ3C1V8 233 aa10.09□□□□□ -0.79
RAB11FIP3-207ENST00000461009 C2orf83Q53S99 150 aa10.09□□□□□ -0.79
RAB11FIP3-207ENST00000461009 PVRIGQ6DKI7 326 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms