RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 TCTEX1D1Q8N7M0 179 aa12.71□□□□□ -0.37
LMNB1-203ENST00000460265 SLC25A10Q9UBX3 287 aaPredicted RBP12.71□□□□□ -0.37
LMNB1-203ENST00000460265 IL19Q9UHD0 177 aa12.71□□□□□ -0.37
LMNB1-203ENST00000460265 IGFL2Q6UWQ7 119 aa12.71□□□□□ -0.37
LMNB1-203ENST00000460265 SFXN3Q9BWM7 321 aa12.71□□□□□ -0.37
LMNB1-203ENST00000460265 C11orf1Q9H5F2 150 aa12.71□□□□□ -0.37
LMNB1-203ENST00000460265 RIPPLY3P57055 190 aa12.71□□□□□ -0.38
LMNB1-203ENST00000460265 ZNF90Q03938 601 aa12.71□□□□□ -0.38
LMNB1-203ENST00000460265 C5orf30Q96GV9 206 aa12.71□□□□□ -0.38
LMNB1-203ENST00000460265 FBXL7Q9UJT9 491 aa12.71□□□□□ -0.38
LMNB1-203ENST00000460265 hADV38S2A0JD32 116 aa12.7□□□□□ -0.38
LMNB1-203ENST00000460265 C1QTNF9BB2RNN3 333 aa12.7□□□□□ -0.38
LMNB1-203ENST00000460265 K7ERU9 68 aa12.7□□□□□ -0.38
LMNB1-203ENST00000460265 RRHO14718 337 aa12.7□□□□□ -0.38
LMNB1-203ENST00000460265 TOMM40O96008 361 aa12.7□□□□□ -0.38
LMNB1-203ENST00000460265 IGLV1-44P01699 117 aa12.7□□□□□ -0.38
LMNB1-203ENST00000460265 ST6GALNAC3Q8NDV1 305 aa12.7□□□□□ -0.38
LMNB1-203ENST00000460265 PRSS33Q8NF86 280 aa12.7□□□□□ -0.38
LMNB1-203ENST00000460265 NEIL1Q96FI4 390 aaPredicted RBP12.7□□□□□ -0.38
LMNB1-203ENST00000460265 COMMD5Q9GZQ3 224 aa12.7□□□□□ -0.38
LMNB1-203ENST00000460265 JPT1Q9UK76 154 aa12.7□□□□□ -0.38
LMNB1-203ENST00000460265 A0A0G2JNJ9 132 aa12.7□□□□□ -0.38
LMNB1-203ENST00000460265 MDFIC2A0A1B0GVS7 189 aa12.7□□□□□ -0.38
LMNB1-203ENST00000460265 FAM90A26D6RGX4 464 aa12.7□□□□□ -0.38
LMNB1-203ENST00000460265 NPIPB11E5RHQ5 1161 aa12.7□□□□□ -0.38
LMNB1-203ENST00000460265 CGAP01215 116 aa12.7□□□□□ -0.38
LMNB1-203ENST00000460265 ZNF430Q9H8G1 570 aaPredicted RBP12.7□□□□□ -0.38
LMNB1-203ENST00000460265 PLEKHA3Q9HB20 300 aa12.7□□□□□ -0.38
LMNB1-203ENST00000460265 Q9UFV3 132 aa12.7□□□□□ -0.38
LMNB1-203ENST00000460265 RTL8BQ17RB0 113 aa12.7□□□□□ -0.38
LMNB1-203ENST00000460265 STUMQ69YW2 141 aa12.7□□□□□ -0.38
LMNB1-203ENST00000460265 OR4A47Q6IF82 309 aa12.7□□□□□ -0.38
LMNB1-203ENST00000460265 CENPVQ7Z7K6 275 aaPredicted RBP12.7□□□□□ -0.38
LMNB1-203ENST00000460265 NPCDR1Q9BY65 106 aa12.7□□□□□ -0.38
LMNB1-203ENST00000460265 NGBQ9NPG2 151 aa12.7□□□□□ -0.38
LMNB1-203ENST00000460265 TCF19Q9Y242 345 aa12.7□□□□□ -0.38
LMNB1-203ENST00000460265 SAA2-SAA4A0A096LPE2 208 aa12.69□□□□□ -0.38
LMNB1-203ENST00000460265 LYNX1G3V0Z9 82 aa12.69□□□□□ -0.38
LMNB1-203ENST00000460265 FCN1O00602 326 aa12.69□□□□□ -0.38
LMNB1-203ENST00000460265 NDUFB3O43676 98 aa12.69□□□□□ -0.38
LMNB1-203ENST00000460265 SAA2P0DJI9 122 aaPredicted RBP12.69□□□□□ -0.38
LMNB1-203ENST00000460265 LYNX1P0DP58 116 aa12.69□□□□□ -0.38
LMNB1-203ENST00000460265 PSG1P11464 419 aa12.69□□□□□ -0.38
LMNB1-203ENST00000460265 LINC01560Q8TB33 94 aa12.69□□□□□ -0.38
LMNB1-203ENST00000460265 HES4Q9HCC6 221 aa12.69□□□□□ -0.38
LMNB1-203ENST00000460265 TRAV30A0A087WSZ9 112 aa12.69□□□□□ -0.38
LMNB1-203ENST00000460265 CTXND1A0A1B0GTU2 59 aa12.69□□□□□ -0.38
LMNB1-203ENST00000460265 C11orf94C9JXX5 98 aa12.69□□□□□ -0.38
LMNB1-203ENST00000460265 CT45A1Q5HYN5 189 aa12.69□□□□□ -0.38
LMNB1-203ENST00000460265 Q5PR19 223 aa12.69□□□□□ -0.38
LMNB1-203ENST00000460265 CT45A3Q8NHU0 189 aa12.69□□□□□ -0.38
LMNB1-203ENST00000460265 MRPL18Q9H0U6 180 aaKnown RBP12.69□□□□□ -0.38
LMNB1-203ENST00000460265 TBL2Q9Y4P3 447 aaKnown RBP12.69□□□□□ -0.38
LMNB1-203ENST00000460265 DSCAMO60469 2012 aa12.69□□□□□ -0.38
LMNB1-203ENST00000460265 J3QR06 171 aa12.68□□□□□ -0.38
LMNB1-203ENST00000460265 C16orf54Q6UWD8 224 aa12.68□□□□□ -0.38
LMNB1-203ENST00000460265 S100A7AQ86SG5 101 aa12.68□□□□□ -0.38
LMNB1-203ENST00000460265 NEUROG1Q92886 237 aa12.68□□□□□ -0.38
LMNB1-203ENST00000460265 FAM208BQ5VWN6 2430 aa12.68□□□□□ -0.38
LMNB1-203ENST00000460265 PGPEP1LA6NFU8 196 aa12.68□□□□□ -0.38
LMNB1-203ENST00000460265 F2Z2F3 143 aa12.68□□□□□ -0.38
LMNB1-203ENST00000460265 MMP23AO75900 390 aa12.68□□□□□ -0.38
LMNB1-203ENST00000460265 IGKV1D-33P01593 117 aa12.68□□□□□ -0.38
LMNB1-203ENST00000460265 IGKV1-33P01594 117 aa12.68□□□□□ -0.38
LMNB1-203ENST00000460265 APOA2P02652 100 aa12.68□□□□□ -0.38
LMNB1-203ENST00000460265 C1QTNF9P0C862 333 aa12.68□□□□□ -0.38
LMNB1-203ENST00000460265 NTF3P20783 257 aa12.68□□□□□ -0.38
LMNB1-203ENST00000460265 NPY1RP25929 384 aa12.68□□□□□ -0.38
LMNB1-203ENST00000460265 PPIAL4EA0A075B759 164 aa12.68□□□□□ -0.38
LMNB1-203ENST00000460265 KBTBD11-OT1A0A1B0GTJ5 212 aa12.68□□□□□ -0.38
LMNB1-203ENST00000460265 PPIAL4DF5H284 164 aa12.68□□□□□ -0.38
LMNB1-203ENST00000460265 OR7C2O60412 319 aa12.68□□□□□ -0.38
LMNB1-203ENST00000460265 PPIAL4FP0DN26 164 aa12.68□□□□□ -0.38
LMNB1-203ENST00000460265 TSPOP30536 169 aa12.68□□□□□ -0.38
LMNB1-203ENST00000460265 ZNF295-AS1Q8N0V1 137 aa12.68□□□□□ -0.38
LMNB1-203ENST00000460265 PRR7Q8TB68 274 aa12.68□□□□□ -0.38
LMNB1-203ENST00000460265 MAP1AP78559 2803 aaPredicted RBP12.68□□□□□ -0.38
LMNB1-203ENST00000460265 DLX1P56177 255 aa12.67□□□□□ -0.38
LMNB1-203ENST00000460265 GNB1P62873 340 aa12.67□□□□□ -0.38
LMNB1-203ENST00000460265 TMEM14EPQ6UXP3 125 aa12.67□□□□□ -0.38
LMNB1-203ENST00000460265 ASCL5Q7RTU5 278 aa12.67□□□□□ -0.38
LMNB1-203ENST00000460265 NRN1Q9NPD7 142 aa12.67□□□□□ -0.38
LMNB1-203ENST00000460265 A0A1W2PRD5 423 aa12.67□□□□□ -0.38
LMNB1-203ENST00000460265 A0A1W2PRF3 423 aa12.67□□□□□ -0.38
LMNB1-203ENST00000460265 A0A1W2PRM7 423 aa12.67□□□□□ -0.38
LMNB1-203ENST00000460265 GATA2P23769 480 aaPredicted RBP12.67□□□□□ -0.38
LMNB1-203ENST00000460265 TIMP3P35625 211 aa12.67□□□□□ -0.38
LMNB1-203ENST00000460265 HTD2P86397 168 aa12.67□□□□□ -0.38
LMNB1-203ENST00000460265 LRRC10Q5BKY1 277 aa12.67□□□□□ -0.38
LMNB1-203ENST00000460265 SPACA3Q8IXA5 215 aa12.67□□□□□ -0.38
LMNB1-203ENST00000460265 HARBI1Q96MB7 349 aa12.67□□□□□ -0.38
LMNB1-203ENST00000460265 PSMG3Q9BT73 122 aaPredicted RBP12.67□□□□□ -0.38
LMNB1-203ENST00000460265 ELOVL5Q9NYP7 299 aa12.67□□□□□ -0.38
LMNB1-203ENST00000460265 DPRXA6NFQ7 191 aa12.67□□□□□ -0.38
LMNB1-203ENST00000460265 ZNF253O75346 499 aa12.67□□□□□ -0.38
LMNB1-203ENST00000460265 VENTXO95231 258 aa12.67□□□□□ -0.38
LMNB1-203ENST00000460265 CD99P14209 185 aa12.67□□□□□ -0.38
LMNB1-203ENST00000460265 PLGLAQ15195 96 aa12.67□□□□□ -0.38
LMNB1-203ENST00000460265 TP53TG3Q9ULZ0 132 aa12.67□□□□□ -0.38
LMNB1-203ENST00000460265 OR51B2Q9Y5P1 312 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms