RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 IFT46Q9NQC8 304 aa8.99□□□□□ -0.97
GPNMB-204ENST00000459927 FAM212BQ9NTI7 297 aaPredicted RBP8.99□□□□□ -0.97
GPNMB-204ENST00000459927 ANAPC10Q9UM13 185 aa8.99□□□□□ -0.97
GPNMB-204ENST00000459927 KIAA1109Q2LD37 5005 aa8.98□□□□□ -0.97
GPNMB-204ENST00000459927 HECTD4Q9Y4D8 3996 aa8.98□□□□□ -0.97
GPNMB-204ENST00000459927 C15orf61A6NNL5 157 aa8.98□□□□□ -0.97
GPNMB-204ENST00000459927 IGLL5B9A064 214 aa8.98□□□□□ -0.97
GPNMB-204ENST00000459927 DNASE2O00115 360 aaPredicted RBP8.98□□□□□ -0.97
GPNMB-204ENST00000459927 GNG7O60262 68 aa8.98□□□□□ -0.97
GPNMB-204ENST00000459927 TMEM50AO95807 157 aa8.98□□□□□ -0.97
GPNMB-204ENST00000459927 CA1P00915 261 aaPredicted RBP8.98□□□□□ -0.97
GPNMB-204ENST00000459927 DEFB131AP59861 70 aa8.98□□□□□ -0.97
GPNMB-204ENST00000459927 ERHP84090 104 aaKnown RBP8.98□□□□□ -0.97
GPNMB-204ENST00000459927 LPCAT3Q6P1A2 487 aa8.98□□□□□ -0.97
GPNMB-204ENST00000459927 OR5H2Q8NGV7 314 aa8.98□□□□□ -0.97
GPNMB-204ENST00000459927 OR4A16Q8NH70 328 aa8.98□□□□□ -0.97
GPNMB-204ENST00000459927 ST8SIA2Q92186 375 aa8.98□□□□□ -0.97
GPNMB-204ENST00000459927 AGRNO00468 2067 aa8.98□□□□□ -0.97
GPNMB-204ENST00000459927 C11orf94C9JXX5 98 aa8.97□□□□□ -0.97
GPNMB-204ENST00000459927 ST8SIA3O43173 380 aa8.97□□□□□ -0.97
GPNMB-204ENST00000459927 IGKV1-39P01597 117 aa8.97□□□□□ -0.97
GPNMB-204ENST00000459927 IGKV1D-39P04432 117 aa8.97□□□□□ -0.97
GPNMB-204ENST00000459927 GIG44P09565 113 aaPredicted RBP8.97□□□□□ -0.97
GPNMB-204ENST00000459927 RBMY1A1P0DJD3 496 aaKnown RBP8.97□□□□□ -0.97
GPNMB-204ENST00000459927 RBMY1CP0DJD4 496 aa8.97□□□□□ -0.97
GPNMB-204ENST00000459927 PRSS3P35030 304 aa8.97□□□□□ -0.97
GPNMB-204ENST00000459927 PRCDQ00LT1 54 aa8.97□□□□□ -0.97
GPNMB-204ENST00000459927 RBMY1FQ15415 496 aaKnown RBP8.97□□□□□ -0.97
GPNMB-204ENST00000459927 LEMD1Q68G75 181 aa8.97□□□□□ -0.97
GPNMB-204ENST00000459927 H2BFWTQ7Z2G1 175 aa8.97□□□□□ -0.97
GPNMB-204ENST00000459927 ZNF114Q8NC26 417 aa8.97□□□□□ -0.97
GPNMB-204ENST00000459927 PINX1Q96BK5 328 aaKnown RBP8.97□□□□□ -0.97
GPNMB-204ENST00000459927 GINS3Q9BRX5 216 aa8.97□□□□□ -0.97
GPNMB-204ENST00000459927 HRH4Q9H3N8 390 aa8.97□□□□□ -0.97
GPNMB-204ENST00000459927 TRAV2A0A0B4J234 112 aa8.96□□□□□ -0.98
GPNMB-204ENST00000459927 IGHV3-66A0A0C4DH42 116 aa8.96□□□□□ -0.98
GPNMB-204ENST00000459927 HLA-DMAP28067 261 aa8.96□□□□□ -0.98
GPNMB-204ENST00000459927 RPS19P39019 145 aaKnown RBP8.96□□□□□ -0.98
GPNMB-204ENST00000459927 NPBWR1P48145 328 aa8.96□□□□□ -0.98
GPNMB-204ENST00000459927 TAS2R46P59540 309 aa8.96□□□□□ -0.98
GPNMB-204ENST00000459927 RPL11P62913 178 aaKnown RBP8.96□□□□□ -0.98
GPNMB-204ENST00000459927 PHLDA2Q53GA4 152 aa8.96□□□□□ -0.98
GPNMB-204ENST00000459927 TBC1D26Q86UD7 250 aa8.96□□□□□ -0.98
GPNMB-204ENST00000459927 CROCCP3Q8IVE0 287 aa8.96□□□□□ -0.98
GPNMB-204ENST00000459927 FAM24BQ8N5W8 94 aa8.96□□□□□ -0.98
GPNMB-204ENST00000459927 Q8NAQ8 132 aa8.96□□□□□ -0.98
GPNMB-204ENST00000459927 DNAH6Q9C0G6 4158 aa8.95□□□□□ -0.98
GPNMB-204ENST00000459927 A0A1B0GU03 582 aa8.95□□□□□ -0.98
GPNMB-204ENST00000459927 EIF4EP06730 217 aaKnown RBP8.95□□□□□ -0.98
GPNMB-204ENST00000459927 NPPCP23582 126 aa8.95□□□□□ -0.98
GPNMB-204ENST00000459927 HLA-DMBP28068 263 aa8.95□□□□□ -0.98
GPNMB-204ENST00000459927 HRH1P35367 487 aa8.95□□□□□ -0.98
GPNMB-204ENST00000459927 UCP3P55916 312 aa8.95□□□□□ -0.98
GPNMB-204ENST00000459927 TAS2R20P59543 309 aa8.95□□□□□ -0.98
GPNMB-204ENST00000459927 TSPAN5P62079 268 aa8.95□□□□□ -0.98
GPNMB-204ENST00000459927 MLANAQ16655 118 aa8.95□□□□□ -0.98
GPNMB-204ENST00000459927 TMEM69Q5SWH9 247 aa8.95□□□□□ -0.98
GPNMB-204ENST00000459927 PVRIGQ6DKI7 326 aa8.95□□□□□ -0.98
GPNMB-204ENST00000459927 ZNF600Q6ZNG1 722 aa8.95□□□□□ -0.98
GPNMB-204ENST00000459927 STHQ8IWL8 128 aa8.95□□□□□ -0.98
GPNMB-204ENST00000459927 FXYD6Q9H0Q3 95 aa8.95□□□□□ -0.98
GPNMB-204ENST00000459927 ZFAND3Q9H8U3 227 aa8.95□□□□□ -0.98
GPNMB-204ENST00000459927 PUS1Q9Y606 427 aaKnown RBP eCLIP8.95□□□□□ -0.98
GPNMB-204ENST00000459927 PCLOQ9Y6V0 5065 aa8.94□□□□□ -0.98
GPNMB-204ENST00000459927 DNAH17Q9UFH2 4485 aa8.94□□□□□ -0.98
GPNMB-204ENST00000459927 S100GP29377 79 aa8.94□□□□□ -0.98
GPNMB-204ENST00000459927 TGFBR1P36897 503 aa8.94□□□□□ -0.98
GPNMB-204ENST00000459927 SNCAP37840 140 aa8.94□□□□□ -0.98
GPNMB-204ENST00000459927 UBE2NLQ5JXB2 153 aa8.94□□□□□ -0.98
GPNMB-204ENST00000459927 SAMD12Q8N8I0 201 aa8.94□□□□□ -0.98
GPNMB-204ENST00000459927 GPX8Q8TED1 209 aa8.94□□□□□ -0.98
GPNMB-204ENST00000459927 ELOA3CA0A087WX78 387 aaPredicted RBP8.93□□□□□ -0.98
GPNMB-204ENST00000459927 A0A0B4J293 547 aa8.93□□□□□ -0.98
GPNMB-204ENST00000459927 IGHV4-28A0A0C4DH34 117 aa8.93□□□□□ -0.98
GPNMB-204ENST00000459927 A0A1W2PS18 150 aa8.93□□□□□ -0.98
GPNMB-204ENST00000459927 ZNF705EA8MWA4 302 aaPredicted RBP8.93□□□□□ -0.98
GPNMB-204ENST00000459927 INS-IGF2F8WCM5 200 aa8.93□□□□□ -0.98
GPNMB-204ENST00000459927 K7EQG2 157 aa8.93□□□□□ -0.98
GPNMB-204ENST00000459927 MIFP14174 115 aa8.93□□□□□ -0.98
GPNMB-204ENST00000459927 IZUMO4Q1ZYL8 232 aa8.93□□□□□ -0.98
GPNMB-204ENST00000459927 TMEM41BQ5BJD5 291 aa8.93□□□□□ -0.98
GPNMB-204ENST00000459927 MORN3Q6PF18 240 aaPredicted RBP8.93□□□□□ -0.98
GPNMB-204ENST00000459927 TRPT1Q86TN4 253 aaKnown RBP8.93□□□□□ -0.98
GPNMB-204ENST00000459927 CSNK1G2-AS1Q8NCQ2 148 aa8.93□□□□□ -0.98
GPNMB-204ENST00000459927 MRGPRFQ96AM1 343 aa8.93□□□□□ -0.98
GPNMB-204ENST00000459927 RABAC1Q9UI14 185 aa8.93□□□□□ -0.98
GPNMB-204ENST00000459927 TRAV10A0A0B4J240 114 aa8.92□□□□□ -0.98
GPNMB-204ENST00000459927 CRYBB3P26998 211 aa8.92□□□□□ -0.98
GPNMB-204ENST00000459927 ETV6P41212 452 aa8.92□□□□□ -0.98
GPNMB-204ENST00000459927 SUB1P53999 127 aaKnown RBP eCLIP8.92□□□□□ -0.98
GPNMB-204ENST00000459927 NEDD8Q15843 81 aa8.92□□□□□ -0.98
GPNMB-204ENST00000459927 SPINK9Q5DT21 86 aa8.92□□□□□ -0.98
GPNMB-204ENST00000459927 LINC00336Q6ZUF6 198 aa8.92□□□□□ -0.98
GPNMB-204ENST00000459927 GRAMD2BQ96HH9 432 aa8.92□□□□□ -0.98
GPNMB-204ENST00000459927 Q9H521 79 aa8.92□□□□□ -0.98
GPNMB-204ENST00000459927 TMEM231Q9H6L2 316 aa8.92□□□□□ -0.98
GPNMB-204ENST00000459927 X6R8D5 127 aa8.92□□□□□ -0.98
GPNMB-204ENST00000459927 IGHV4-4A0A075B6R2 117 aa8.91□□□□□ -0.98
GPNMB-204ENST00000459927 SMIM31A0A1B0GVY4 71 aa8.91□□□□□ -0.98
GPNMB-204ENST00000459927 KNCNA6PVL3 124 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms