RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 PLA2G10O15496 165 aa16.64■□□□□ 0.25
SSNA1-202ENST00000459860 CLEC3BP05452 202 aa16.64■□□□□ 0.25
SSNA1-202ENST00000459860 KRTAP10-11P60412 298 aa16.64■□□□□ 0.25
SSNA1-202ENST00000459860 ANKRD55Q3KP44 614 aa16.64■□□□□ 0.25
SSNA1-202ENST00000459860 ATP6V0BQ99437 205 aa16.64■□□□□ 0.25
SSNA1-202ENST00000459860 GAR1Q9NY12 217 aaKnown RBP16.64■□□□□ 0.25
SSNA1-202ENST00000459860 FLVCR2Q9UPI3 526 aa16.64■□□□□ 0.25
SSNA1-202ENST00000459860 IGHV3-21A0A0B4J1V1 117 aa16.63■□□□□ 0.25
SSNA1-202ENST00000459860 FAM106AQ4KMX7 169 aa16.63■□□□□ 0.25
SSNA1-202ENST00000459860 C4orf46Q504U0 113 aa16.63■□□□□ 0.25
SSNA1-202ENST00000459860 MZT2BQ6NZ67 158 aa16.63■□□□□ 0.25
SSNA1-202ENST00000459860 PLET1Q6UQ28 207 aa16.63■□□□□ 0.25
SSNA1-202ENST00000459860 UBAC2Q8NBM4 344 aa16.63■□□□□ 0.25
SSNA1-202ENST00000459860 OR1S1Q8NH92 325 aa16.63■□□□□ 0.25
SSNA1-202ENST00000459860 COQ8AQ8NI60 647 aa16.63■□□□□ 0.25
SSNA1-202ENST00000459860 MRAPQ8TCY5 172 aa16.63■□□□□ 0.25
SSNA1-202ENST00000459860 SCARB1Q8WTV0 552 aa16.63■□□□□ 0.25
SSNA1-202ENST00000459860 PINX1Q96BK5 328 aaKnown RBP16.63■□□□□ 0.25
SSNA1-202ENST00000459860 C20orf85Q9H1P6 137 aa16.63■□□□□ 0.25
SSNA1-202ENST00000459860 HEYLQ9NQ87 328 aaPredicted RBP16.63■□□□□ 0.25
SSNA1-202ENST00000459860 TMED3Q9Y3Q3 217 aa16.63■□□□□ 0.25
SSNA1-202ENST00000459860 A0A1B0GU03 582 aa16.62■□□□□ 0.25
SSNA1-202ENST00000459860 C9orf170A2RU37 121 aa16.62■□□□□ 0.25
SSNA1-202ENST00000459860 K7EIM0 57 aa16.62■□□□□ 0.25
SSNA1-202ENST00000459860 NXPH3O95157 252 aa16.62■□□□□ 0.25
SSNA1-202ENST00000459860 OR2C1O95371 312 aa16.62■□□□□ 0.25
SSNA1-202ENST00000459860 OR4E1P0C645 316 aa16.62■□□□□ 0.25
SSNA1-202ENST00000459860 Q56UQ5 140 aa16.62■□□□□ 0.25
SSNA1-202ENST00000459860 BSCL2Q96G97 398 aaPredicted RBP16.62■□□□□ 0.25
SSNA1-202ENST00000459860 HIPK2Q9H2X6 1198 aa16.62■□□□□ 0.25
SSNA1-202ENST00000459860 TGOLN2O43493 480 aa16.61■□□□□ 0.25
SSNA1-202ENST00000459860 LY86O95711 162 aa16.61■□□□□ 0.25
SSNA1-202ENST00000459860 MT-CO2P00403 227 aa16.61■□□□□ 0.25
SSNA1-202ENST00000459860 HTR2BP41595 481 aa16.61■□□□□ 0.25
SSNA1-202ENST00000459860 SPSB3Q6PJ21 355 aa16.61■□□□□ 0.25
SSNA1-202ENST00000459860 LYG2Q86SG7 212 aa16.61■□□□□ 0.25
SSNA1-202ENST00000459860 GPHB5Q86YW7 130 aa16.61■□□□□ 0.25
SSNA1-202ENST00000459860 ZC4H2Q9NQZ6 224 aa16.61■□□□□ 0.25
SSNA1-202ENST00000459860 OR2T8A6NH00 312 aa16.6■□□□□ 0.25
SSNA1-202ENST00000459860 RNASE2P10153 161 aaKnown RBP16.6■□□□□ 0.25
SSNA1-202ENST00000459860 ANXA7P20073 488 aaKnown RBP16.6■□□□□ 0.25
SSNA1-202ENST00000459860 MFAP4P55083 255 aa16.6■□□□□ 0.25
SSNA1-202ENST00000459860 TNFRSF9Q07011 255 aa16.6■□□□□ 0.25
SSNA1-202ENST00000459860 DHRS2Q13268 280 aa16.6■□□□□ 0.25
SSNA1-202ENST00000459860 ZNF256Q9Y2P7 627 aaPredicted RBP16.6■□□□□ 0.25
SSNA1-202ENST00000459860 FAM240BA0A1B0GVZ2 78 aa16.59■□□□□ 0.25
SSNA1-202ENST00000459860 ZNF320A2RRD8 509 aa16.59■□□□□ 0.25
SSNA1-202ENST00000459860 I3L2K1 104 aa16.59■□□□□ 0.25
SSNA1-202ENST00000459860 LGALS9O00182 355 aa16.59■□□□□ 0.25
SSNA1-202ENST00000459860 UPK1BO75841 260 aa16.59■□□□□ 0.25
SSNA1-202ENST00000459860 TCRBP04435 133 aa16.59■□□□□ 0.25
SSNA1-202ENST00000459860 HOXB5P09067 269 aa16.59■□□□□ 0.25
SSNA1-202ENST00000459860 SLC25A6P12236 298 aa16.59■□□□□ 0.25
SSNA1-202ENST00000459860 TXN2Q99757 166 aa16.59■□□□□ 0.25
SSNA1-202ENST00000459860 HSPB7Q9UBY9 170 aa16.59■□□□□ 0.25
SSNA1-202ENST00000459860 ASAH1Q13510 395 aa16.58■□□□□ 0.24
SSNA1-202ENST00000459860 DCTN2Q13561 401 aaKnown RBP16.58■□□□□ 0.24
SSNA1-202ENST00000459860 NOXA1Q86UR1 476 aa16.58■□□□□ 0.24
SSNA1-202ENST00000459860 SLC24A4Q8NFF2 622 aa16.58■□□□□ 0.24
SSNA1-202ENST00000459860 DTD1Q8TEA8 209 aa16.58■□□□□ 0.24
SSNA1-202ENST00000459860 PALMDQ9NP74 551 aa16.58■□□□□ 0.24
SSNA1-202ENST00000459860 NUDT15Q9NV35 164 aa16.58■□□□□ 0.24
SSNA1-202ENST00000459860 SIGLEC8Q9NYZ4 499 aa16.58■□□□□ 0.24
SSNA1-202ENST00000459860 TRAV6A0A075B6T7 132 aa16.57■□□□□ 0.24
SSNA1-202ENST00000459860 WI2-2373I1.2A0A1W2PRP0 233 aa16.57■□□□□ 0.24
SSNA1-202ENST00000459860 NUPL2O15504 423 aaKnown RBP16.57■□□□□ 0.24
SSNA1-202ENST00000459860 GNG7O60262 68 aa16.57■□□□□ 0.24
SSNA1-202ENST00000459860 IFNA21P01568 189 aa16.57■□□□□ 0.24
SSNA1-202ENST00000459860 CSN3P07498 182 aa16.57■□□□□ 0.24
SSNA1-202ENST00000459860 OPRK1P41145 380 aa16.57■□□□□ 0.24
SSNA1-202ENST00000459860 NPBWR1P48145 328 aa16.57■□□□□ 0.24
SSNA1-202ENST00000459860 BSXQ3C1V8 233 aa16.57■□□□□ 0.24
SSNA1-202ENST00000459860 DUSP18Q8NEJ0 188 aa16.57■□□□□ 0.24
SSNA1-202ENST00000459860 DYNLRB2Q8TF09 96 aa16.57■□□□□ 0.24
SSNA1-202ENST00000459860 TBC1D24Q9ULP9 559 aa16.57■□□□□ 0.24
SSNA1-202ENST00000459860 RPS10-NUDT3A0A1W2PQS6 291 aa16.56■□□□□ 0.24
SSNA1-202ENST00000459860 FAM90A26D6RGX4 464 aa16.56■□□□□ 0.24
SSNA1-202ENST00000459860 SCGB2A1O75556 95 aa16.56■□□□□ 0.24
SSNA1-202ENST00000459860 MED6O75586 246 aa16.56■□□□□ 0.24
SSNA1-202ENST00000459860 IGLV1-51P01701 117 aa16.56■□□□□ 0.24
SSNA1-202ENST00000459860 NPY1RP25929 384 aa16.56■□□□□ 0.24
SSNA1-202ENST00000459860 FCGR2BP31994 310 aaPredicted RBP16.56■□□□□ 0.24
SSNA1-202ENST00000459860 GGNBP1Q5YKI7 109 aa16.56■□□□□ 0.24
SSNA1-202ENST00000459860 IL34Q6ZMJ4 242 aa16.56■□□□□ 0.24
SSNA1-202ENST00000459860 HAPLN4Q86UW8 402 aa16.56■□□□□ 0.24
SSNA1-202ENST00000459860 ENKURQ8TC29 256 aa16.56■□□□□ 0.24
SSNA1-202ENST00000459860 PRR25Q96S07 402 aa16.56■□□□□ 0.24
SSNA1-202ENST00000459860 RBKSQ9H477 322 aa16.56■□□□□ 0.24
SSNA1-202ENST00000459860 UFC1Q9Y3C8 167 aa16.56■□□□□ 0.24
SSNA1-202ENST00000459860 IGHV3-35A0A0C4DH35 117 aa16.55■□□□□ 0.24
SSNA1-202ENST00000459860 A8MWP6 167 aa16.55■□□□□ 0.24
SSNA1-202ENST00000459860 K7EIL1 84 aa16.55■□□□□ 0.24
SSNA1-202ENST00000459860 IFNA10P01566 189 aa16.55■□□□□ 0.24
SSNA1-202ENST00000459860 RELQ04864 619 aaPredicted RBP16.55■□□□□ 0.24
SSNA1-202ENST00000459860 C2orf83Q53S99 150 aa16.55■□□□□ 0.24
SSNA1-202ENST00000459860 PVRIGQ6DKI7 326 aa16.55■□□□□ 0.24
SSNA1-202ENST00000459860 C2orf70A6NJV1 201 aa16.54■□□□□ 0.24
SSNA1-202ENST00000459860 PITX3O75364 302 aa16.54■□□□□ 0.24
SSNA1-202ENST00000459860 IGHV3-48P01763 117 aa16.54■□□□□ 0.24
SSNA1-202ENST00000459860 H2AFB2P0C5Z0 115 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 366 ms