RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 RNASEH2CQ8TDP1 164 aaKnown RBP7.15□□□□□ -1.26
VPS50-207ENST00000458530 BSCL2Q96G97 398 aaPredicted RBP7.15□□□□□ -1.26
VPS50-207ENST00000458530 CDC42EP3Q9UKI2 254 aa7.15□□□□□ -1.26
VPS50-207ENST00000458530 FBXO7Q9Y3I1 522 aa7.15□□□□□ -1.26
VPS50-207ENST00000458530 TGP01266 2768 aa7.14□□□□□ -1.27
VPS50-207ENST00000458530 SMCO3A2RU48 225 aa7.14□□□□□ -1.27
VPS50-207ENST00000458530 PMS2P5A8MQ11 134 aa7.14□□□□□ -1.27
VPS50-207ENST00000458530 FGF16O43320 207 aa7.14□□□□□ -1.27
VPS50-207ENST00000458530 CA2P00918 260 aa7.14□□□□□ -1.27
VPS50-207ENST00000458530 MBP02144 154 aa7.14□□□□□ -1.27
VPS50-207ENST00000458530 FGF7P21781 194 aa7.14□□□□□ -1.27
VPS50-207ENST00000458530 CAMLGP49069 296 aa7.14□□□□□ -1.27
VPS50-207ENST00000458530 GNB1P62873 340 aa7.14□□□□□ -1.27
VPS50-207ENST00000458530 C5orf64Q2M2E5 130 aa7.14□□□□□ -1.27
VPS50-207ENST00000458530 BSXQ3C1V8 233 aa7.14□□□□□ -1.27
VPS50-207ENST00000458530 FAM74A1Q5RGS3 127 aa7.14□□□□□ -1.27
VPS50-207ENST00000458530 LDLRAD2Q5SZI1 272 aa7.14□□□□□ -1.27
VPS50-207ENST00000458530 ETFRF1Q6IPR1 90 aa7.14□□□□□ -1.27
VPS50-207ENST00000458530 HAPLN4Q86UW8 402 aa7.14□□□□□ -1.27
VPS50-207ENST00000458530 ZNF114Q8NC26 417 aa7.14□□□□□ -1.27
VPS50-207ENST00000458530 ABHD5Q8WTS1 349 aa7.14□□□□□ -1.27
VPS50-207ENST00000458530 C22orf15Q8WYQ4 148 aa7.14□□□□□ -1.27
VPS50-207ENST00000458530 TAF15Q92804 592 aaKnown RBP eCLIP7.14□□□□□ -1.27
VPS50-207ENST00000458530 SLC35E1Q96K37 410 aa7.14□□□□□ -1.27
VPS50-207ENST00000458530 WDR61Q9GZS3 305 aaKnown RBP7.14□□□□□ -1.27
VPS50-207ENST00000458530 FBXL15Q9H469 300 aa7.14□□□□□ -1.27
VPS50-207ENST00000458530 PARP11Q9NR21 331 aa7.14□□□□□ -1.27
VPS50-207ENST00000458530 YAE1D1Q9NRH1 226 aa7.14□□□□□ -1.27
VPS50-207ENST00000458530 PITPNC1Q9UKF7 332 aa7.14□□□□□ -1.27
VPS50-207ENST00000458530 BTBD17A6NE02 478 aa7.13□□□□□ -1.27
VPS50-207ENST00000458530 NCBP2LA6PVI3 153 aaKnown RBP7.13□□□□□ -1.27
VPS50-207ENST00000458530 TGFAP01135 160 aa7.13□□□□□ -1.27
VPS50-207ENST00000458530 OPN1MWP04001 364 aa7.13□□□□□ -1.27
VPS50-207ENST00000458530 OPN1MW2P0DN77 364 aa7.13□□□□□ -1.27
VPS50-207ENST00000458530 OPN1MW3P0DN78 364 aa7.13□□□□□ -1.27
VPS50-207ENST00000458530 OR13C7P0DN81 318 aa7.13□□□□□ -1.27
VPS50-207ENST00000458530 RNASE2P10153 161 aaKnown RBP7.13□□□□□ -1.27
VPS50-207ENST00000458530 CNTFRP26992 372 aa7.13□□□□□ -1.27
VPS50-207ENST00000458530 GPX4P36969 197 aaPredicted RBP7.13□□□□□ -1.27
VPS50-207ENST00000458530 AKR1C1Q04828 323 aa7.13□□□□□ -1.27
VPS50-207ENST00000458530 ARL16Q0P5N6 197 aa7.13□□□□□ -1.27
VPS50-207ENST00000458530 HNF4GQ14541 408 aa7.13□□□□□ -1.27
VPS50-207ENST00000458530 AANATQ16613 207 aa7.13□□□□□ -1.27
VPS50-207ENST00000458530 TMEM249Q2WGJ8 235 aa7.13□□□□□ -1.27
VPS50-207ENST00000458530 CYB5R2Q6BCY4 276 aa7.13□□□□□ -1.27
VPS50-207ENST00000458530 TMEM182Q6ZP80 229 aaPredicted RBP7.13□□□□□ -1.27
VPS50-207ENST00000458530 COMMD7Q86VX2 200 aa7.13□□□□□ -1.27
VPS50-207ENST00000458530 COMMD1Q8N668 190 aa7.13□□□□□ -1.27
VPS50-207ENST00000458530 Q8N6K4 173 aa7.13□□□□□ -1.27
VPS50-207ENST00000458530 LFNGQ8NES3 379 aa7.13□□□□□ -1.27
VPS50-207ENST00000458530 SRSF12Q8WXF0 261 aaKnown RBP7.13□□□□□ -1.27
VPS50-207ENST00000458530 CACNG8Q8WXS5 425 aa7.13□□□□□ -1.27
VPS50-207ENST00000458530 RASL11BQ9BPW5 248 aa7.13□□□□□ -1.27
VPS50-207ENST00000458530 MEGF9Q9H1U4 602 aa7.13□□□□□ -1.27
VPS50-207ENST00000458530 NPVFQ9HCQ7 196 aa7.13□□□□□ -1.27
VPS50-207ENST00000458530 M0QZK8 103 aa7.12□□□□□ -1.27
VPS50-207ENST00000458530 HBE1P02100 147 aa7.12□□□□□ -1.27
VPS50-207ENST00000458530 IGHV4-31P0DP07 118 aa7.12□□□□□ -1.27
VPS50-207ENST00000458530 ZNF616Q08AN1 781 aa7.12□□□□□ -1.27
VPS50-207ENST00000458530 TEPPQ6URK8 271 aa7.12□□□□□ -1.27
VPS50-207ENST00000458530 BTNL8Q6UX41 500 aa7.12□□□□□ -1.27
VPS50-207ENST00000458530 ZNF562Q6V9R5 426 aa7.12□□□□□ -1.27
VPS50-207ENST00000458530 IL34Q6ZMJ4 242 aa7.12□□□□□ -1.27
VPS50-207ENST00000458530 Q6ZRG5 221 aa7.12□□□□□ -1.27
VPS50-207ENST00000458530 C16orf82Q7Z2V1 217 aa7.12□□□□□ -1.27
VPS50-207ENST00000458530 DYNAPQ8N1N2 210 aa7.12□□□□□ -1.27
VPS50-207ENST00000458530 OR1P1Q8NH06 330 aa7.12□□□□□ -1.27
VPS50-207ENST00000458530 ARPC1AQ92747 370 aa7.12□□□□□ -1.27
VPS50-207ENST00000458530 RITA1Q96K30 269 aa7.12□□□□□ -1.27
VPS50-207ENST00000458530 SH3BGRL3Q9H299 93 aa7.12□□□□□ -1.27
VPS50-207ENST00000458530 WDR83OSQ9Y284 106 aa7.12□□□□□ -1.27
VPS50-207ENST00000458530 MOB4Q9Y3A3 225 aa7.12□□□□□ -1.27
VPS50-207ENST00000458530 PLXNB1O43157 2135 aa7.12□□□□□ -1.27
VPS50-207ENST00000458530 IGLC7A0M8Q6 106 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 RAB19A4D1S5 217 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 PRSS46E5RG02 174 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 SCGB2A1O75556 95 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 GHRHP01286 108 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 HLA-DRB1P01911 266 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 MYOD1P15172 320 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 OPRK1P41145 380 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 RUNX1Q01196 453 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 CD69Q07108 199 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 PJVKQ0ZLH3 352 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 FXYD3Q14802 87 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 ACOT6Q3I5F7 207 aaPredicted RBP7.11□□□□□ -1.27
VPS50-207ENST00000458530 TMEM41BQ5BJD5 291 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 C10orf55Q5SWW7 151 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 PXDC1Q5TGL8 231 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 RUSC1-AS1Q66K80 236 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 UQCC3Q6UW78 93 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 BRD3OSQ6XYD6 125 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 SLC16A13Q7RTY0 426 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 TMEM144Q7Z5S9 345 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 CENPVQ7Z7K6 275 aaPredicted RBP7.11□□□□□ -1.27
VPS50-207ENST00000458530 SLC7A5P1Q8MH63 180 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 OR10W1Q8NGF6 305 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 NANPQ8TBE9 248 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 FAM213BQ8TBF2 198 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 SSMEM1Q8WWF3 244 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms