RNA–Protein interactions for RNA: ENST00000455313.6

PDXDC1-204, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-204ENST00000455313 IGHV4-59P01825 116 aa13.23□□□□□ -0.29
PDXDC1-204ENST00000455313 AMY1AP04745 511 aa13.23□□□□□ -0.29
PDXDC1-204ENST00000455313 HRH4Q9H3N8 390 aa13.23□□□□□ -0.29
PDXDC1-204ENST00000455313 SH2D7A6NKC9 451 aaPredicted RBP13.22□□□□□ -0.29
PDXDC1-204ENST00000455313 ATP6V0CP27449 155 aa13.22□□□□□ -0.29
PDXDC1-204ENST00000455313 SUB1P53999 127 aaKnown RBP eCLIP13.22□□□□□ -0.29
PDXDC1-204ENST00000455313 DLK1P80370 383 aa13.22□□□□□ -0.29
PDXDC1-204ENST00000455313 Q6ZRG5 221 aa13.22□□□□□ -0.29
PDXDC1-204ENST00000455313 ZNF48Q96MX3 618 aaPredicted RBP13.22□□□□□ -0.29
PDXDC1-204ENST00000455313 GGACTQ9BVM4 153 aa13.22□□□□□ -0.29
PDXDC1-204ENST00000455313 ANK3Q12955 4377 aaKnown RBP13.22□□□□□ -0.29
PDXDC1-204ENST00000455313 RAB19A4D1S5 217 aa13.22□□□□□ -0.29
PDXDC1-204ENST00000455313 KRBOX1C9JBD0 128 aa13.22□□□□□ -0.29
PDXDC1-204ENST00000455313 IER3P46695 156 aa13.22□□□□□ -0.29
PDXDC1-204ENST00000455313 ARSJQ5FYB0 599 aaPredicted RBP13.22□□□□□ -0.29
PDXDC1-204ENST00000455313 SPNS3Q6ZMD2 512 aa13.22□□□□□ -0.29
PDXDC1-204ENST00000455313 TEX29Q8N6K0 151 aa13.22□□□□□ -0.29
PDXDC1-204ENST00000455313 WDR61Q9GZS3 305 aaKnown RBP13.22□□□□□ -0.29
PDXDC1-204ENST00000455313 PARP11Q9NR21 331 aa13.22□□□□□ -0.29
PDXDC1-204ENST00000455313 SETXQ7Z333 2677 aaKnown RBP13.22□□□□□ -0.29
PDXDC1-204ENST00000455313 FHITP49789 147 aa13.21□□□□□ -0.29
PDXDC1-204ENST00000455313 MFAP2P55001 183 aa13.21□□□□□ -0.29
PDXDC1-204ENST00000455313 BLOC1S1P78537 153 aa13.21□□□□□ -0.29
PDXDC1-204ENST00000455313 ASPHD1Q5U4P2 390 aa13.21□□□□□ -0.29
PDXDC1-204ENST00000455313 BTNL8Q6UX41 500 aa13.21□□□□□ -0.29
PDXDC1-204ENST00000455313 PARD6GQ9BYG4 376 aaPredicted RBP13.21□□□□□ -0.29
PDXDC1-204ENST00000455313 F11RQ9Y624 299 aaKnown RBP13.21□□□□□ -0.29
PDXDC1-204ENST00000455313 SMCO3A2RU48 225 aa13.21□□□□□ -0.3
PDXDC1-204ENST00000455313 EGR2P11161 476 aaPredicted RBP13.21□□□□□ -0.3
PDXDC1-204ENST00000455313 CTRB1P17538 263 aa13.21□□□□□ -0.3
PDXDC1-204ENST00000455313 CTRB2Q6GPI1 263 aa13.21□□□□□ -0.3
PDXDC1-204ENST00000455313 BPIFCQ8NFQ6 507 aa13.21□□□□□ -0.3
PDXDC1-204ENST00000455313 OR1P1Q8NH06 330 aa13.21□□□□□ -0.3
PDXDC1-204ENST00000455313 SCGB1C1Q8TD33 95 aa13.21□□□□□ -0.3
PDXDC1-204ENST00000455313 TAF15Q92804 592 aaKnown RBP eCLIP13.21□□□□□ -0.3
PDXDC1-204ENST00000455313 RSG1Q9BU20 258 aa13.21□□□□□ -0.3
PDXDC1-204ENST00000455313 YAE1D1Q9NRH1 226 aa13.21□□□□□ -0.3
PDXDC1-204ENST00000455313 SRSF3P84103 164 aaKnown RBP13.2□□□□□ -0.3
PDXDC1-204ENST00000455313 PVRIGQ6DKI7 326 aa13.2□□□□□ -0.3
PDXDC1-204ENST00000455313 TMEM182Q6ZP80 229 aaPredicted RBP13.2□□□□□ -0.3
PDXDC1-204ENST00000455313 RNASEH2CQ8TDP1 164 aaKnown RBP13.2□□□□□ -0.3
PDXDC1-204ENST00000455313 GNPNAT1Q96EK6 184 aaPredicted RBP13.2□□□□□ -0.3
PDXDC1-204ENST00000455313 DMRT1Q9Y5R6 373 aa13.2□□□□□ -0.3
PDXDC1-204ENST00000455313 ATP6V0E1O15342 81 aa13.2□□□□□ -0.3
PDXDC1-204ENST00000455313 SCO1O75880 301 aa13.2□□□□□ -0.3
PDXDC1-204ENST00000455313 MDKP21741 143 aaPredicted RBP13.2□□□□□ -0.3
PDXDC1-204ENST00000455313 AKR1C1Q04828 323 aa13.2□□□□□ -0.3
PDXDC1-204ENST00000455313 CD69Q07108 199 aa13.2□□□□□ -0.3
PDXDC1-204ENST00000455313 UQCC3Q6UW78 93 aa13.2□□□□□ -0.3
PDXDC1-204ENST00000455313 TREML4Q6UXN2 200 aa13.2□□□□□ -0.3
PDXDC1-204ENST00000455313 Q6YL49 198 aa13.2□□□□□ -0.3
PDXDC1-204ENST00000455313 IL34Q6ZMJ4 242 aa13.2□□□□□ -0.3
PDXDC1-204ENST00000455313 C16orf82Q7Z2V1 217 aa13.2□□□□□ -0.3
PDXDC1-204ENST00000455313 LFNGQ8NES3 379 aa13.2□□□□□ -0.3
PDXDC1-204ENST00000455313 LYPD6BQ8NI32 183 aa13.2□□□□□ -0.3
PDXDC1-204ENST00000455313 NUDT19A8MXV4 375 aa13.19□□□□□ -0.3
PDXDC1-204ENST00000455313 M0QZK8 103 aa13.19□□□□□ -0.3
PDXDC1-204ENST00000455313 FGF7P21781 194 aa13.19□□□□□ -0.3
PDXDC1-204ENST00000455313 OPRK1P41145 380 aa13.19□□□□□ -0.3
PDXDC1-204ENST00000455313 OR2G3Q8NGZ4 309 aa13.19□□□□□ -0.3
PDXDC1-204ENST00000455313 OR5R1Q8NH85 324 aa13.19□□□□□ -0.3
PDXDC1-204ENST00000455313 SGMS2Q8NHU3 365 aa13.19□□□□□ -0.3
PDXDC1-204ENST00000455313 PRDM13Q9H4Q3 707 aa13.19□□□□□ -0.3
PDXDC1-204ENST00000455313 FNDC4Q9H6D8 234 aaPredicted RBP13.19□□□□□ -0.3
PDXDC1-204ENST00000455313 WDR83OSQ9Y284 106 aa13.19□□□□□ -0.3
PDXDC1-204ENST00000455313 HIVEP2P31629 2446 aa13.19□□□□□ -0.3
PDXDC1-204ENST00000455313 HIVEP1P15822 2718 aa13.18□□□□□ -0.3
PDXDC1-204ENST00000455313 LINC01548A6NM66 108 aa13.18□□□□□ -0.3
PDXDC1-204ENST00000455313 MLANAQ16655 118 aa13.18□□□□□ -0.3
PDXDC1-204ENST00000455313 MISP3Q96FF7 219 aa13.18□□□□□ -0.3
PDXDC1-204ENST00000455313 WNT10AQ9GZT5 417 aa13.18□□□□□ -0.3
PDXDC1-204ENST00000455313 NPIPB5A8MRT5 1133 aa13.18□□□□□ -0.3
PDXDC1-204ENST00000455313 FNDC10F2Z333 226 aa13.18□□□□□ -0.3
PDXDC1-204ENST00000455313 CRYGCP07315 174 aa13.18□□□□□ -0.3
PDXDC1-204ENST00000455313 SRP14P37108 136 aaKnown RBP13.18□□□□□ -0.3
PDXDC1-204ENST00000455313 CAMLGP49069 296 aa13.18□□□□□ -0.3
PDXDC1-204ENST00000455313 RAB5CP51148 216 aa13.18□□□□□ -0.3
PDXDC1-204ENST00000455313 SLC16A13Q7RTY0 426 aa13.18□□□□□ -0.3
PDXDC1-204ENST00000455313 SMR3AQ99954 134 aa13.18□□□□□ -0.3
PDXDC1-204ENST00000455313 NPCDR1Q9BY65 106 aa13.18□□□□□ -0.3
PDXDC1-204ENST00000455313 TNFRSF19Q9NS68 423 aa13.18□□□□□ -0.3
PDXDC1-204ENST00000455313 VPREB3Q9UKI3 123 aa13.18□□□□□ -0.3
PDXDC1-204ENST00000455313 BTBD17A6NE02 478 aa13.17□□□□□ -0.3
PDXDC1-204ENST00000455313 PRH1P02810 166 aa13.17□□□□□ -0.3
PDXDC1-204ENST00000455313 DEFA4P12838 97 aa13.17□□□□□ -0.3
PDXDC1-204ENST00000455313 ZNF616Q08AN1 781 aa13.17□□□□□ -0.3
PDXDC1-204ENST00000455313 GAMTQ14353 236 aa13.17□□□□□ -0.3
PDXDC1-204ENST00000455313 CACNG8Q8WXS5 425 aa13.17□□□□□ -0.3
PDXDC1-204ENST00000455313 NARS2Q96I59 477 aaKnown RBP13.17□□□□□ -0.3
PDXDC1-204ENST00000455313 NPVFQ9HCQ7 196 aa13.17□□□□□ -0.3
PDXDC1-204ENST00000455313 LSM4Q9Y4Z0 139 aaKnown RBP13.17□□□□□ -0.3
PDXDC1-204ENST00000455313 CORTO00230 105 aa13.17□□□□□ -0.3
PDXDC1-204ENST00000455313 AGPAT2O15120 278 aa13.17□□□□□ -0.3
PDXDC1-204ENST00000455313 HOXA3O43365 443 aaPredicted RBP13.17□□□□□ -0.3
PDXDC1-204ENST00000455313 GPX4P36969 197 aaPredicted RBP13.17□□□□□ -0.3
PDXDC1-204ENST00000455313 ECSCRQ19T08 205 aa13.17□□□□□ -0.3
PDXDC1-204ENST00000455313 TTC9CQ8N5M4 171 aa13.17□□□□□ -0.3
PDXDC1-204ENST00000455313 PSMG3Q9BT73 122 aaPredicted RBP13.17□□□□□ -0.3
PDXDC1-204ENST00000455313 TMEM231Q9H6L2 316 aa13.17□□□□□ -0.3
PDXDC1-204ENST00000455313 TRIM77I1YAP6 450 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms