RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 MMDQ15546 238 aa12.84□□□□□ -0.35
TRA2B-205ENST00000453386 WNT10AQ9GZT5 417 aa12.84□□□□□ -0.35
TRA2B-205ENST00000453386 ZNF331Q9NQX6 463 aaPredicted RBP12.84□□□□□ -0.35
TRA2B-205ENST00000453386 ITGB1BP1O14713 200 aa12.84□□□□□ -0.35
TRA2B-205ENST00000453386 MMP23AO75900 390 aa12.84□□□□□ -0.35
TRA2B-205ENST00000453386 HLA-DQA1P01909 254 aa12.84□□□□□ -0.35
TRA2B-205ENST00000453386 SRSF6Q13247 344 aaKnown RBP12.84□□□□□ -0.35
TRA2B-205ENST00000453386 RTL8BQ17RB0 113 aa12.84□□□□□ -0.35
TRA2B-205ENST00000453386 COX19Q49B96 90 aa12.84□□□□□ -0.35
TRA2B-205ENST00000453386 TXN2Q99757 166 aa12.84□□□□□ -0.35
TRA2B-205ENST00000453386 SLC25A33Q9BSK2 321 aa12.84□□□□□ -0.35
TRA2B-205ENST00000453386 RP1L1Q8IWN7 2480 aaPredicted RBP12.83□□□□□ -0.36
TRA2B-205ENST00000453386 USF1P22415 310 aaPredicted RBP12.83□□□□□ -0.36
TRA2B-205ENST00000453386 UBE2L3P68036 154 aaKnown RBP12.83□□□□□ -0.36
TRA2B-205ENST00000453386 COL5A1-AS1Q5SY13 56 aa12.83□□□□□ -0.36
TRA2B-205ENST00000453386 FAM168AQ92567 244 aa12.83□□□□□ -0.36
TRA2B-205ENST00000453386 SLC25A15Q9Y619 301 aa12.83□□□□□ -0.36
TRA2B-205ENST00000453386 A0A1W2PRE2 83 aa12.83□□□□□ -0.36
TRA2B-205ENST00000453386 CT45A6P0DMU7 189 aa12.83□□□□□ -0.36
TRA2B-205ENST00000453386 CT45A5P0DMU8 189 aa12.83□□□□□ -0.36
TRA2B-205ENST00000453386 CT45A7P0DMV0 189 aa12.83□□□□□ -0.36
TRA2B-205ENST00000453386 MORN5Q5VZ52 161 aa12.83□□□□□ -0.36
TRA2B-205ENST00000453386 CCL13Q99616 98 aa12.83□□□□□ -0.36
TRA2B-205ENST00000453386 ZNF257Q9Y2Q1 563 aa12.83□□□□□ -0.36
TRA2B-205ENST00000453386 PPIAL4AQ9Y536 164 aa12.83□□□□□ -0.36
TRA2B-205ENST00000453386 SMIM27A0A1W2PRY6 76 aa12.82□□□□□ -0.36
TRA2B-205ENST00000453386 LHBP01229 141 aa12.82□□□□□ -0.36
TRA2B-205ENST00000453386 C3orf79P0CE67 100 aa12.82□□□□□ -0.36
TRA2B-205ENST00000453386 ATOH7Q8N100 152 aa12.82□□□□□ -0.36
TRA2B-205ENST00000453386 OR2T6Q8NHC8 308 aa12.82□□□□□ -0.36
TRA2B-205ENST00000453386 BORCS7Q96B45 105 aa12.82□□□□□ -0.36
TRA2B-205ENST00000453386 DPRXA6NFQ7 191 aa12.82□□□□□ -0.36
TRA2B-205ENST00000453386 PCNX2A6NKB5 2137 aa12.82□□□□□ -0.36
TRA2B-205ENST00000453386 GAGE1Q13065 139 aa12.82□□□□□ -0.36
TRA2B-205ENST00000453386 POU2AF1Q16633 256 aa12.82□□□□□ -0.36
TRA2B-205ENST00000453386 IGF2BP2-AS1Q96M15 143 aa12.82□□□□□ -0.36
TRA2B-205ENST00000453386 C19orf24Q9BVV8 132 aa12.82□□□□□ -0.36
TRA2B-205ENST00000453386 YLPM1P49750 1951 aaKnown RBP12.82□□□□□ -0.36
TRA2B-205ENST00000453386 DSCAMO60469 2012 aa12.81□□□□□ -0.36
TRA2B-205ENST00000453386 C2orf83Q53S99 150 aa12.81□□□□□ -0.36
TRA2B-205ENST00000453386 Q6ZN92 141 aa12.81□□□□□ -0.36
TRA2B-205ENST00000453386 FAM216BQ8N7L0 139 aa12.81□□□□□ -0.36
TRA2B-205ENST00000453386 TSKUQ8WUA8 353 aa12.81□□□□□ -0.36
TRA2B-205ENST00000453386 ZNF355PQ9NSJ1 428 aa12.81□□□□□ -0.36
TRA2B-205ENST00000453386 TRAV34A0A0B4J273 112 aa12.81□□□□□ -0.36
TRA2B-205ENST00000453386 IZUMO1RA6ND01 250 aa12.81□□□□□ -0.36
TRA2B-205ENST00000453386 SAA1P0DJI8 122 aaPredicted RBP12.81□□□□□ -0.36
TRA2B-205ENST00000453386 SLAQ13239 276 aa12.81□□□□□ -0.36
TRA2B-205ENST00000453386 ZNF439Q8NDP4 499 aa12.81□□□□□ -0.36
TRA2B-205ENST00000453386 SNRNP40Q96DI7 357 aaKnown RBP12.81□□□□□ -0.36
TRA2B-205ENST00000453386 RNF7Q9UBF6 113 aa12.81□□□□□ -0.36
TRA2B-205ENST00000453386 CACNA1GO43497 2377 aa12.81□□□□□ -0.36
TRA2B-205ENST00000453386 RNASE2P10153 161 aaKnown RBP12.81□□□□□ -0.36
TRA2B-205ENST00000453386 PRRX1P54821 245 aa12.81□□□□□ -0.36
TRA2B-205ENST00000453386 MFAP2P55001 183 aa12.81□□□□□ -0.36
TRA2B-205ENST00000453386 CD69Q07108 199 aa12.81□□□□□ -0.36
TRA2B-205ENST00000453386 NIT1Q86X76 327 aa12.81□□□□□ -0.36
TRA2B-205ENST00000453386 UQCR10Q9UDW1 63 aa12.81□□□□□ -0.36
TRA2B-205ENST00000453386 SPENQ96T58 3664 aaKnown RBP12.81□□□□□ -0.36
TRA2B-205ENST00000453386 IGHV3-48P01763 117 aa12.8□□□□□ -0.36
TRA2B-205ENST00000453386 PYYP10082 97 aa12.8□□□□□ -0.36
TRA2B-205ENST00000453386 CTRLP40313 264 aa12.8□□□□□ -0.36
TRA2B-205ENST00000453386 PRR27Q6MZM9 219 aa12.8□□□□□ -0.36
TRA2B-205ENST00000453386 RBM14Q96PK6 669 aaKnown RBP12.8□□□□□ -0.36
TRA2B-205ENST00000453386 COMMD5Q9GZQ3 224 aa12.8□□□□□ -0.36
TRA2B-205ENST00000453386 DNAJC4Q9NNZ3 241 aa12.8□□□□□ -0.36
TRA2B-205ENST00000453386 AMMECR1Q9Y4X0 333 aaPredicted RBP12.8□□□□□ -0.36
TRA2B-205ENST00000453386 HYPMO75409 117 aa12.8□□□□□ -0.36
TRA2B-205ENST00000453386 DMRTA1Q5VZB9 504 aa12.8□□□□□ -0.36
TRA2B-205ENST00000453386 SLC25A2Q9BXI2 301 aa12.8□□□□□ -0.36
TRA2B-205ENST00000453386 DKK4Q9UBT3 224 aa12.8□□□□□ -0.36
TRA2B-205ENST00000453386 IGLC2P0DOY2 106 aa12.79□□□□□ -0.36
TRA2B-205ENST00000453386 IGLC3P0DOY3 106 aa12.79□□□□□ -0.36
TRA2B-205ENST00000453386 CHRNB4P30926 498 aa12.79□□□□□ -0.36
TRA2B-205ENST00000453386 HNRNPA3P51991 378 aaKnown RBP12.79□□□□□ -0.36
TRA2B-205ENST00000453386 C11orf42Q8N5U0 333 aa12.79□□□□□ -0.36
TRA2B-205ENST00000453386 OR5B3Q8NH48 314 aa12.79□□□□□ -0.36
TRA2B-205ENST00000453386 CFAP47Q6ZTR5 3102 aa12.79□□□□□ -0.36
TRA2B-205ENST00000453386 TRAV17A0A0B4J275 112 aa12.79□□□□□ -0.36
TRA2B-205ENST00000453386 COX7A2P2O60397 106 aa12.79□□□□□ -0.36
TRA2B-205ENST00000453386 LCN12Q6JVE5 192 aa12.79□□□□□ -0.36
TRA2B-205ENST00000453386 PNKDQ8N490 385 aa12.79□□□□□ -0.36
TRA2B-205ENST00000453386 PLCE1Q9P212 2302 aa12.79□□□□□ -0.36
TRA2B-205ENST00000453386 MAP1BP46821 2468 aaKnown RBP12.79□□□□□ -0.36
TRA2B-205ENST00000453386 ARFGEF3Q5TH69 2177 aa12.79□□□□□ -0.36
TRA2B-205ENST00000453386 GLRXP35754 106 aa12.78□□□□□ -0.36
TRA2B-205ENST00000453386 ERHP84090 104 aaKnown RBP12.78□□□□□ -0.36
TRA2B-205ENST00000453386 TNFAIP6P98066 277 aaPredicted RBP12.78□□□□□ -0.36
TRA2B-205ENST00000453386 OR1L8Q8NGR8 309 aa12.78□□□□□ -0.36
TRA2B-205ENST00000453386 C18orf32Q8TCD1 76 aa12.78□□□□□ -0.36
TRA2B-205ENST00000453386 FAM167A-AS1Q96KT0 104 aa12.78□□□□□ -0.36
TRA2B-205ENST00000453386 HARBI1Q96MB7 349 aa12.78□□□□□ -0.36
TRA2B-205ENST00000453386 GAFA1Q96PS6 74 aa12.78□□□□□ -0.36
TRA2B-205ENST00000453386 NCOR1P1Q9H4R4 102 aa12.78□□□□□ -0.36
TRA2B-205ENST00000453386 BOD1L1Q8NFC6 3051 aa12.78□□□□□ -0.36
TRA2B-205ENST00000453386 SP9P0CG40 484 aa12.78□□□□□ -0.36
TRA2B-205ENST00000453386 REG1BP48304 166 aa12.78□□□□□ -0.36
TRA2B-205ENST00000453386 SSBP2P81877 361 aaPredicted RBP12.78□□□□□ -0.36
TRA2B-205ENST00000453386 SLC25A48Q6ZT89 311 aaKnown RBP12.78□□□□□ -0.36
TRA2B-205ENST00000453386 GUCD1Q96NT3 240 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms