RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 SFXN3Q9BWM7 321 aa7.65□□□□□ -1.18
KLHL3-202ENST00000447439 MRPL18Q9H0U6 180 aaKnown RBP7.65□□□□□ -1.18
KLHL3-202ENST00000447439 DSCAML1Q8TD84 2053 aa7.65□□□□□ -1.18
KLHL3-202ENST00000447439 ZZEF1O43149 2961 aa7.65□□□□□ -1.19
KLHL3-202ENST00000447439 TRAV34A0A0B4J273 112 aa7.65□□□□□ -1.19
KLHL3-202ENST00000447439 HELTA6NFD8 242 aa7.65□□□□□ -1.19
KLHL3-202ENST00000447439 LYNX1G3V0Z9 82 aa7.65□□□□□ -1.19
KLHL3-202ENST00000447439 H0YJW9 148 aa7.65□□□□□ -1.19
KLHL3-202ENST00000447439 LYNX1P0DP58 116 aa7.65□□□□□ -1.19
KLHL3-202ENST00000447439 CEACAM8P31997 349 aaPredicted RBP7.65□□□□□ -1.19
KLHL3-202ENST00000447439 GNG4P50150 75 aa7.65□□□□□ -1.19
KLHL3-202ENST00000447439 WT1-ASQ06250 92 aa7.65□□□□□ -1.19
KLHL3-202ENST00000447439 TDRG1Q3Y452 100 aa7.65□□□□□ -1.19
KLHL3-202ENST00000447439 IGFL3Q6UXB1 125 aa7.65□□□□□ -1.19
KLHL3-202ENST00000447439 REC114Q7Z4M0 266 aa7.65□□□□□ -1.19
KLHL3-202ENST00000447439 MMD2Q8IY49 270 aa7.65□□□□□ -1.19
KLHL3-202ENST00000447439 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.65□□□□□ -1.19
KLHL3-202ENST00000447439 ST6GALNAC3Q8NDV1 305 aa7.65□□□□□ -1.19
KLHL3-202ENST00000447439 OR10X1Q8NGY0 326 aa7.65□□□□□ -1.19
KLHL3-202ENST00000447439 ABHD17AQ96GS6 310 aa7.65□□□□□ -1.19
KLHL3-202ENST00000447439 BTF3L4Q96K17 158 aa7.65□□□□□ -1.19
KLHL3-202ENST00000447439 COMMD5Q9GZQ3 224 aa7.65□□□□□ -1.19
KLHL3-202ENST00000447439 SAP30LQ9HAJ7 183 aa7.65□□□□□ -1.19
KLHL3-202ENST00000447439 SERTAD4Q9NUC0 356 aa7.65□□□□□ -1.19
KLHL3-202ENST00000447439 IL36BQ9NZH7 164 aa7.65□□□□□ -1.19
KLHL3-202ENST00000447439 CTSZQ9UBR2 303 aa7.65□□□□□ -1.19
KLHL3-202ENST00000447439 PLXNB1O43157 2135 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 CGB1A6NKQ9 187 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 C17orf100A8MU93 164 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 A8MWP6 167 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 SNURFLB1AK76 121 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 H3BTX0 84 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 FCN1O00602 326 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 ITGB1BP1O14713 200 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 ENSAO43768 121 aaKnown RBP7.64□□□□□ -1.19
KLHL3-202ENST00000447439 SERF1AO75920 110 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 USF2Q15853 346 aaPredicted RBP7.64□□□□□ -1.19
KLHL3-202ENST00000447439 TMEM108Q6UXF1 575 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 ADTRPQ96IZ2 230 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 ZNF714Q96N38 554 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 SSBP3Q9BWW4 388 aaPredicted RBP7.64□□□□□ -1.19
KLHL3-202ENST00000447439 COL25A1Q9BXS0 654 aaPredicted RBP7.64□□□□□ -1.19
KLHL3-202ENST00000447439 FNDC4Q9H6D8 234 aaPredicted RBP7.64□□□□□ -1.19
KLHL3-202ENST00000447439 FKBP11Q9NYL4 201 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 V9GYV3 84 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 ACACAQ13085 2346 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 NKX6-3A6NJ46 265 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 ZNF705FA8MVS1 300 aaPredicted RBP7.64□□□□□ -1.19
KLHL3-202ENST00000447439 C16orf97H3BN30 126 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 ZNF705DP0CH99 300 aaPredicted RBP7.64□□□□□ -1.19
KLHL3-202ENST00000447439 ZNF705BP0CI00 300 aaPredicted RBP7.64□□□□□ -1.19
KLHL3-202ENST00000447439 RAB4BP61018 213 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 HCP5Q6MZN7 132 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 MRPL54Q6P161 138 aaKnown RBP7.64□□□□□ -1.19
KLHL3-202ENST00000447439 FAM168AQ92567 244 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 NPIPB3Q92617 1050 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 FAM103A1Q9BTL3 118 aaKnown RBP7.64□□□□□ -1.19
KLHL3-202ENST00000447439 NCOR1P1Q9H4R4 102 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 CHODLQ9H9P2 273 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 RAB9BQ9NP90 201 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 CBLN4Q9NTU7 201 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 NAV3Q8IVL0 2385 aa7.64□□□□□ -1.19
KLHL3-202ENST00000447439 LRBAP50851 2863 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 TANC2Q9HCD6 1990 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 ZGRF1Q86YA3 2104 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 EREGO14944 169 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 SLC25A17O43808 307 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 MT-CO2P00403 227 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 MOSP00540 346 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 CNTFRP26992 372 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 CDKN1AP38936 164 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 RPL8P62917 257 aaKnown RBP7.63□□□□□ -1.19
KLHL3-202ENST00000447439 TEX36Q5VZQ5 186 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 ZNF833PQ6ZTB9 187 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 CMTM2Q8TAZ6 248 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 FLYWCH2Q96CP2 140 aaKnown RBP7.63□□□□□ -1.19
KLHL3-202ENST00000447439 MS4A10Q96PG2 267 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 SLC25A2Q9BXI2 301 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 GSX1Q9H4S2 264 aaPredicted RBP7.63□□□□□ -1.19
KLHL3-202ENST00000447439 TECRQ9NZ01 308 aaKnown RBP7.63□□□□□ -1.19
KLHL3-202ENST00000447439 RNF114Q9Y508 228 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 LINC00312Q9Y6C7 94 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 CRYABP02511 175 aaKnown RBP7.63□□□□□ -1.19
KLHL3-202ENST00000447439 APOA2P02652 100 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 GNG5P63218 68 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 UBE2L3P68036 154 aaKnown RBP7.63□□□□□ -1.19
KLHL3-202ENST00000447439 CD69Q07108 199 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 TCF15Q12870 199 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 POU2AF1Q16633 256 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 RPEL1Q2QD12 228 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 Q6ZWC4 215 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 OR5AU1Q8NGC0 362 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 ATG101Q9BSB4 218 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 ZNF430Q9H8G1 570 aaPredicted RBP7.63□□□□□ -1.19
KLHL3-202ENST00000447439 NDUFA4L2Q9NRX3 87 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 RPH3ALQ9UNE2 315 aa7.63□□□□□ -1.19
KLHL3-202ENST00000447439 POLR3KQ9Y2Y1 108 aaPredicted RBP7.63□□□□□ -1.19
KLHL3-202ENST00000447439 DCHS2Q6V1P9 2916 aa7.62□□□□□ -1.19
KLHL3-202ENST00000447439 APC2O95996 2303 aa7.62□□□□□ -1.19
KLHL3-202ENST00000447439 PPIAL4EA0A075B759 164 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms