RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 ZNF600Q6ZNG1 722 aa6.75□□□□□ -1.33
HDAC8-215ENST00000444609 DHFR2Q86XF0 187 aa6.75□□□□□ -1.33
HDAC8-215ENST00000444609 TMEM208Q9BTX3 173 aa6.75□□□□□ -1.33
HDAC8-215ENST00000444609 SAV1Q9H4B6 383 aaPredicted RBP6.75□□□□□ -1.33
HDAC8-215ENST00000444609 DNAJC4Q9NNZ3 241 aa6.75□□□□□ -1.33
HDAC8-215ENST00000444609 ERVK13-1Q9NX77 482 aa6.75□□□□□ -1.33
HDAC8-215ENST00000444609 A0A0A6YYD4 124 aa6.74□□□□□ -1.33
HDAC8-215ENST00000444609 SAC3D1A6NKF1 404 aa6.74□□□□□ -1.33
HDAC8-215ENST00000444609 K7EP13 123 aa6.74□□□□□ -1.33
HDAC8-215ENST00000444609 SOCS1O15524 211 aa6.74□□□□□ -1.33
HDAC8-215ENST00000444609 DENRO43583 198 aaKnown RBP6.74□□□□□ -1.33
HDAC8-215ENST00000444609 CIB2O75838 187 aa6.74□□□□□ -1.33
HDAC8-215ENST00000444609 IGLV2-14P01704 120 aa6.74□□□□□ -1.33
HDAC8-215ENST00000444609 IGHV3-48P01763 117 aa6.74□□□□□ -1.33
HDAC8-215ENST00000444609 FGF2P09038 288 aa6.74□□□□□ -1.33
HDAC8-215ENST00000444609 CD37P11049 281 aa6.74□□□□□ -1.33
HDAC8-215ENST00000444609 AZU1P20160 251 aa6.74□□□□□ -1.33
HDAC8-215ENST00000444609 DCKP27707 260 aa6.74□□□□□ -1.33
HDAC8-215ENST00000444609 MS4A2Q01362 244 aa6.74□□□□□ -1.33
HDAC8-215ENST00000444609 TTC23Q5W5X9 447 aa6.74□□□□□ -1.33
HDAC8-215ENST00000444609 ADGRG5Q8IZF4 528 aa6.74□□□□□ -1.33
HDAC8-215ENST00000444609 OR4B1Q8NGF8 309 aa6.74□□□□□ -1.33
HDAC8-215ENST00000444609 MOB3AQ96BX8 217 aa6.74□□□□□ -1.33
HDAC8-215ENST00000444609 NRBF2Q96F24 287 aa6.74□□□□□ -1.33
HDAC8-215ENST00000444609 METTL26Q96S19 204 aa6.74□□□□□ -1.33
HDAC8-215ENST00000444609 TMEM59Q9BXS4 323 aa6.74□□□□□ -1.33
HDAC8-215ENST00000444609 BATF3Q9NR55 127 aa6.74□□□□□ -1.33
HDAC8-215ENST00000444609 RBMX2Q9Y388 322 aaKnown RBP6.74□□□□□ -1.33
HDAC8-215ENST00000444609 TRBV5-5A0A0J9YX44 114 aa6.73□□□□□ -1.33
HDAC8-215ENST00000444609 TEX50A0A1B0GTY4 177 aa6.73□□□□□ -1.33
HDAC8-215ENST00000444609 PSCAO43653 123 aa6.73□□□□□ -1.33
HDAC8-215ENST00000444609 UBBP0CG47 229 aa6.73□□□□□ -1.33
HDAC8-215ENST00000444609 CD36P16671 472 aa6.73□□□□□ -1.33
HDAC8-215ENST00000444609 ASAH1Q13510 395 aa6.73□□□□□ -1.33
HDAC8-215ENST00000444609 ZNF79Q15937 498 aa6.73□□□□□ -1.33
HDAC8-215ENST00000444609 ACSM3Q53FZ2 586 aa6.73□□□□□ -1.33
HDAC8-215ENST00000444609 XAF1Q6GPH4 301 aa6.73□□□□□ -1.33
HDAC8-215ENST00000444609 RPL22L1Q6P5R6 122 aaKnown RBP6.73□□□□□ -1.33
HDAC8-215ENST00000444609 FOXI2Q6ZQN5 318 aa6.73□□□□□ -1.33
HDAC8-215ENST00000444609 H1FOOQ8IZA3 346 aaPredicted RBP6.73□□□□□ -1.33
HDAC8-215ENST00000444609 OR13F1Q8NGS4 319 aa6.73□□□□□ -1.33
HDAC8-215ENST00000444609 TCTEX1D2Q8WW35 142 aa6.73□□□□□ -1.33
HDAC8-215ENST00000444609 IGF2BP2-AS1Q96M15 143 aa6.73□□□□□ -1.33
HDAC8-215ENST00000444609 CMSS1Q9BQ75 279 aaKnown RBP6.73□□□□□ -1.33
HDAC8-215ENST00000444609 AIFM2Q9BRQ8 373 aa6.73□□□□□ -1.33
HDAC8-215ENST00000444609 NDUFA4L2Q9NRX3 87 aa6.73□□□□□ -1.33
HDAC8-215ENST00000444609 LY96Q9Y6Y9 160 aa6.73□□□□□ -1.33
HDAC8-215ENST00000444609 A0A1W2PPK0 400 aa6.72□□□□□ -1.33
HDAC8-215ENST00000444609 J3QRK9 145 aa6.72□□□□□ -1.33
HDAC8-215ENST00000444609 FKBP6O75344 327 aa6.72□□□□□ -1.33
HDAC8-215ENST00000444609 MT-CO2P00403 227 aa6.72□□□□□ -1.33
HDAC8-215ENST00000444609 IGLV2-11P01706 119 aa6.72□□□□□ -1.33
HDAC8-215ENST00000444609 UNC119Q13432 240 aa6.72□□□□□ -1.33
HDAC8-215ENST00000444609 EIF4EBP1Q13541 118 aaPredicted RBP6.72□□□□□ -1.33
HDAC8-215ENST00000444609 CCDC58Q4VC31 144 aa6.72□□□□□ -1.33
HDAC8-215ENST00000444609 TMED4Q7Z7H5 227 aa6.72□□□□□ -1.33
HDAC8-215ENST00000444609 CMTM1Q8IZ96 169 aa6.72□□□□□ -1.33
HDAC8-215ENST00000444609 PQLC1Q8N2U9 271 aa6.72□□□□□ -1.33
HDAC8-215ENST00000444609 OR10J6PQ8NGY7 276 aa6.72□□□□□ -1.33
HDAC8-215ENST00000444609 OR1P1Q8NH06 330 aa6.72□□□□□ -1.33
HDAC8-215ENST00000444609 LSM10Q969L4 123 aaKnown RBP6.72□□□□□ -1.33
HDAC8-215ENST00000444609 LGALS12Q96DT0 336 aa6.72□□□□□ -1.33
HDAC8-215ENST00000444609 NARS2Q96I59 477 aaKnown RBP6.72□□□□□ -1.33
HDAC8-215ENST00000444609 ABHD1Q96SE0 405 aa6.72□□□□□ -1.33
HDAC8-215ENST00000444609 HSD17B10Q99714 261 aaKnown RBP6.72□□□□□ -1.33
HDAC8-215ENST00000444609 GINS4Q9BRT9 223 aa6.72□□□□□ -1.33
HDAC8-215ENST00000444609 DCSTAMPQ9H295 470 aa6.72□□□□□ -1.33
HDAC8-215ENST00000444609 U3KQE9 123 aa6.72□□□□□ -1.33
HDAC8-215ENST00000444609 FOXI3A8MTJ6 420 aaPredicted RBP6.71□□□□□ -1.34
HDAC8-215ENST00000444609 POLR2IP36954 125 aaKnown RBP6.71□□□□□ -1.34
HDAC8-215ENST00000444609 PPP5CP53041 499 aa6.71□□□□□ -1.34
HDAC8-215ENST00000444609 TMEM50BP56557 158 aa6.71□□□□□ -1.34
HDAC8-215ENST00000444609 MRPS15P82914 257 aaKnown RBP6.71□□□□□ -1.34
HDAC8-215ENST00000444609 Q499Y3 187 aa6.71□□□□□ -1.34
HDAC8-215ENST00000444609 C16orf54Q6UWD8 224 aa6.71□□□□□ -1.34
HDAC8-215ENST00000444609 DEFB107AQ8IZN7 70 aa6.71□□□□□ -1.34
HDAC8-215ENST00000444609 FAM89BQ8N5H3 189 aa6.71□□□□□ -1.34
HDAC8-215ENST00000444609 OR1L8Q8NGR8 309 aa6.71□□□□□ -1.34
HDAC8-215ENST00000444609 CANT1Q8WVQ1 401 aa6.71□□□□□ -1.34
HDAC8-215ENST00000444609 MISP3Q96FF7 219 aa6.71□□□□□ -1.34
HDAC8-215ENST00000444609 VSIG2Q96IQ7 327 aa6.71□□□□□ -1.34
HDAC8-215ENST00000444609 SCPEP1Q9HB40 452 aa6.71□□□□□ -1.34
HDAC8-215ENST00000444609 NRN1Q9NPD7 142 aa6.71□□□□□ -1.34
HDAC8-215ENST00000444609 SPATA2Q9UM82 520 aa6.71□□□□□ -1.34
HDAC8-215ENST00000444609 CDK1P06493 297 aa6.7□□□□□ -1.34
HDAC8-215ENST00000444609 RORCP51449 518 aa6.7□□□□□ -1.34
HDAC8-215ENST00000444609 B2MP61769 119 aa6.7□□□□□ -1.34
HDAC8-215ENST00000444609 RPS11P62280 158 aaKnown RBP eCLIP6.7□□□□□ -1.34
HDAC8-215ENST00000444609 QRFPP83859 136 aa6.7□□□□□ -1.34
HDAC8-215ENST00000444609 POU2AF1Q16633 256 aa6.7□□□□□ -1.34
HDAC8-215ENST00000444609 LINC01620Q4KN68 170 aa6.7□□□□□ -1.34
HDAC8-215ENST00000444609 SPATA31B1PQ5VZV4 182 aa6.7□□□□□ -1.34
HDAC8-215ENST00000444609 NKAIN3Q8N8D7 197 aa6.7□□□□□ -1.34
HDAC8-215ENST00000444609 SLC29A1Q99808 456 aa6.7□□□□□ -1.34
HDAC8-215ENST00000444609 LINC00467Q9BRT7 94 aa6.7□□□□□ -1.34
HDAC8-215ENST00000444609 LPAR5Q9H1C0 372 aa6.7□□□□□ -1.34
HDAC8-215ENST00000444609 TIMM8BQ9Y5J9 83 aaPredicted RBP6.7□□□□□ -1.34
HDAC8-215ENST00000444609 TMEM14DPA8MWL7 114 aa6.69□□□□□ -1.34
HDAC8-215ENST00000444609 OGG1O15527 345 aa6.69□□□□□ -1.34
HDAC8-215ENST00000444609 SLC22A5O76082 557 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms