RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 TMEM213A2RRL7 107 aa14.09□□□□□ -0.15
CCDC188-202ENST00000444532 I3L2K1 104 aa14.09□□□□□ -0.15
CCDC188-202ENST00000444532 AKR1C4P17516 323 aa14.09□□□□□ -0.15
CCDC188-202ENST00000444532 FCGR2BP31994 310 aaPredicted RBP14.09□□□□□ -0.15
CCDC188-202ENST00000444532 SUB1P53999 127 aaKnown RBP eCLIP14.09□□□□□ -0.15
CCDC188-202ENST00000444532 SPCS3P61009 180 aa14.09□□□□□ -0.15
CCDC188-202ENST00000444532 TMEM187Q14656 261 aa14.09□□□□□ -0.15
CCDC188-202ENST00000444532 Q56UQ5 140 aa14.09□□□□□ -0.15
CCDC188-202ENST00000444532 SPINK9Q5DT21 86 aa14.09□□□□□ -0.15
CCDC188-202ENST00000444532 C11orf87Q6NUJ2 197 aa14.09□□□□□ -0.15
CCDC188-202ENST00000444532 GTSCR1Q86UQ5 136 aa14.09□□□□□ -0.15
CCDC188-202ENST00000444532 OR52E5Q8NH55 327 aa14.09□□□□□ -0.15
CCDC188-202ENST00000444532 ENY2Q9NPA8 101 aa14.09□□□□□ -0.15
CCDC188-202ENST00000444532 IGHV3-35A0A0C4DH35 117 aa14.08□□□□□ -0.16
CCDC188-202ENST00000444532 A8MZ25 164 aa14.08□□□□□ -0.16
CCDC188-202ENST00000444532 F8W735 103 aaPredicted RBP14.08□□□□□ -0.16
CCDC188-202ENST00000444532 FRMD6-AS1P0C7T7 363 aa14.08□□□□□ -0.16
CCDC188-202ENST00000444532 ANXA3P12429 323 aa14.08□□□□□ -0.16
CCDC188-202ENST00000444532 EDN2P20800 178 aa14.08□□□□□ -0.16
CCDC188-202ENST00000444532 MFAP4P55083 255 aa14.08□□□□□ -0.16
CCDC188-202ENST00000444532 TM4SF20Q53R12 229 aa14.08□□□□□ -0.16
CCDC188-202ENST00000444532 UNQ9165/PRO28630Q6UXU0 137 aa14.08□□□□□ -0.16
CCDC188-202ENST00000444532 UBAC2Q8NBM4 344 aa14.08□□□□□ -0.16
CCDC188-202ENST00000444532 GPR146Q96CH1 333 aa14.08□□□□□ -0.16
CCDC188-202ENST00000444532 SLC25A21Q9BQT8 299 aaPredicted RBP14.08□□□□□ -0.16
CCDC188-202ENST00000444532 CHRDL1Q9BU40 450 aa14.08□□□□□ -0.16
CCDC188-202ENST00000444532 SRRQ9GZT4 340 aa14.08□□□□□ -0.16
CCDC188-202ENST00000444532 MRPL27Q9P0M9 148 aaKnown RBP14.08□□□□□ -0.16
CCDC188-202ENST00000444532 CACFD1Q9UGQ2 172 aa14.08□□□□□ -0.16
CCDC188-202ENST00000444532 PIGBOS1A0A0B4J2F0 54 aa14.07□□□□□ -0.16
CCDC188-202ENST00000444532 ZNF785A8K8V0 405 aa14.07□□□□□ -0.16
CCDC188-202ENST00000444532 NDUFA4O00483 81 aa14.07□□□□□ -0.16
CCDC188-202ENST00000444532 MT-CO2P00403 227 aa14.07□□□□□ -0.16
CCDC188-202ENST00000444532 CTSGP08311 255 aa14.07□□□□□ -0.16
CCDC188-202ENST00000444532 C8orf88P0DMB2 117 aa14.07□□□□□ -0.16
CCDC188-202ENST00000444532 IGHV4-30-4P0DP06 118 aa14.07□□□□□ -0.16
CCDC188-202ENST00000444532 HOXA1P49639 335 aaPredicted RBP14.07□□□□□ -0.16
CCDC188-202ENST00000444532 SUPT4H1P63272 117 aaKnown RBP14.07□□□□□ -0.16
CCDC188-202ENST00000444532 PVRIGQ6DKI7 326 aa14.07□□□□□ -0.16
CCDC188-202ENST00000444532 UXS1Q8NBZ7 420 aa14.07□□□□□ -0.16
CCDC188-202ENST00000444532 CACNG8Q8WXS5 425 aa14.07□□□□□ -0.16
CCDC188-202ENST00000444532 TMEM190Q8WZ59 177 aa14.07□□□□□ -0.16
CCDC188-202ENST00000444532 ASCL2Q99929 193 aa14.07□□□□□ -0.16
CCDC188-202ENST00000444532 CACNG5Q9UF02 275 aa14.07□□□□□ -0.16
CCDC188-202ENST00000444532 CORTO00230 105 aa14.06□□□□□ -0.16
CCDC188-202ENST00000444532 NUPL2O15504 423 aaKnown RBP14.06□□□□□ -0.16
CCDC188-202ENST00000444532 ADMP35318 185 aa14.06□□□□□ -0.16
CCDC188-202ENST00000444532 SRPXP78539 464 aa14.06□□□□□ -0.16
CCDC188-202ENST00000444532 TMEM128Q5BJH2 165 aa14.06□□□□□ -0.16
CCDC188-202ENST00000444532 ZNF57Q68EA5 555 aaPredicted RBP14.06□□□□□ -0.16
CCDC188-202ENST00000444532 PINX1Q96BK5 328 aaKnown RBP14.06□□□□□ -0.16
CCDC188-202ENST00000444532 C19orf73Q9NVV2 129 aa14.06□□□□□ -0.16
CCDC188-202ENST00000444532 A0A0B4J2A0 478 aa14.05□□□□□ -0.16
CCDC188-202ENST00000444532 SULT1A3P0DMM9 295 aa14.05□□□□□ -0.16
CCDC188-202ENST00000444532 SULT1A4P0DMN0 295 aa14.05□□□□□ -0.16
CCDC188-202ENST00000444532 RNASE2P10153 161 aaKnown RBP14.05□□□□□ -0.16
CCDC188-202ENST00000444532 RELQ04864 619 aaPredicted RBP14.05□□□□□ -0.16
CCDC188-202ENST00000444532 SBSPONQ8IVN8 264 aa14.05□□□□□ -0.16
CCDC188-202ENST00000444532 LGI3Q8N145 548 aa14.05□□□□□ -0.16
CCDC188-202ENST00000444532 SDHCQ99643 169 aaPredicted RBP14.05□□□□□ -0.16
CCDC188-202ENST00000444532 DAZ1Q9NQZ3 744 aaKnown RBP14.05□□□□□ -0.16
CCDC188-202ENST00000444532 MLXQ9UH92 298 aa14.05□□□□□ -0.16
CCDC188-202ENST00000444532 SHPKQ9UHJ6 478 aa14.05□□□□□ -0.16
CCDC188-202ENST00000444532 U3KQK5 164 aa14.05□□□□□ -0.16
CCDC188-202ENST00000444532 DNAH9Q9NYC9 4486 aa14.05□□□□□ -0.16
CCDC188-202ENST00000444532 K7EMT4 169 aa14.04□□□□□ -0.16
CCDC188-202ENST00000444532 INPP1P49441 399 aa14.04□□□□□ -0.16
CCDC188-202ENST00000444532 BAK1Q16611 211 aa14.04□□□□□ -0.16
CCDC188-202ENST00000444532 GUCA2BQ16661 112 aa14.04□□□□□ -0.16
CCDC188-202ENST00000444532 BSXQ3C1V8 233 aa14.04□□□□□ -0.16
CCDC188-202ENST00000444532 TRIQKQ629K1 86 aa14.04□□□□□ -0.16
CCDC188-202ENST00000444532 TMED4Q7Z7H5 227 aa14.04□□□□□ -0.16
CCDC188-202ENST00000444532 DUSP18Q8NEJ0 188 aa14.04□□□□□ -0.16
CCDC188-202ENST00000444532 TRAV25A0A0B4J276 109 aa14.03□□□□□ -0.16
CCDC188-202ENST00000444532 NAP1L6A6NFF2 107 aa14.03□□□□□ -0.16
CCDC188-202ENST00000444532 C15orf62A8K5M9 175 aa14.03□□□□□ -0.16
CCDC188-202ENST00000444532 GNG7O60262 68 aa14.03□□□□□ -0.16
CCDC188-202ENST00000444532 IGHV3-48P01763 117 aa14.03□□□□□ -0.16
CCDC188-202ENST00000444532 HTR2BP41595 481 aa14.03□□□□□ -0.16
CCDC188-202ENST00000444532 NPBWR1P48145 328 aa14.03□□□□□ -0.16
CCDC188-202ENST00000444532 CCR6P51684 374 aa14.03□□□□□ -0.16
CCDC188-202ENST00000444532 CD81P60033 236 aa14.03□□□□□ -0.16
CCDC188-202ENST00000444532 BTNL8Q6UX41 500 aa14.03□□□□□ -0.16
CCDC188-202ENST00000444532 LYZL2Q7Z4W2 148 aa14.03□□□□□ -0.16
CCDC188-202ENST00000444532 WDR89Q96FK6 387 aaPredicted RBP14.03□□□□□ -0.16
CCDC188-202ENST00000444532 NEURL2Q9BR09 285 aa14.03□□□□□ -0.16
CCDC188-202ENST00000444532 HEYLQ9NQ87 328 aaPredicted RBP14.03□□□□□ -0.16
CCDC188-202ENST00000444532 PRR13Q9NZ81 148 aa14.03□□□□□ -0.16
CCDC188-202ENST00000444532 PTTG2Q9NZH5 202 aa14.03□□□□□ -0.16
CCDC188-202ENST00000444532 DUXBA0A1W2PPF3 345 aa14.02□□□□□ -0.17
CCDC188-202ENST00000444532 RBMS2Q15434 407 aaKnown RBP14.02□□□□□ -0.17
CCDC188-202ENST00000444532 NMSQ5H8A3 153 aa14.02□□□□□ -0.17
CCDC188-202ENST00000444532 LINC00299Q6ZSB3 139 aa14.02□□□□□ -0.17
CCDC188-202ENST00000444532 TMEM61Q8N0U2 210 aa14.02□□□□□ -0.17
CCDC188-202ENST00000444532 C20orf24Q9BUV8 137 aa14.02□□□□□ -0.17
CCDC188-202ENST00000444532 TUBA4BQ9H853 241 aa14.02□□□□□ -0.17
CCDC188-202ENST00000444532 CEBPZOSA8MTT3 80 aa14.01□□□□□ -0.17
CCDC188-202ENST00000444532 SMCO1Q147U7 214 aa14.01□□□□□ -0.17
CCDC188-202ENST00000444532 ANKRD55Q3KP44 614 aa14.01□□□□□ -0.17
CCDC188-202ENST00000444532 C2orf83Q53S99 150 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms