RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 TMEM11P17152 192 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 HOXB4P17483 251 aaPredicted RBP2.26□□□□□ -2.05
LINC00393-201ENST00000443621 CDKN1AP38936 164 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 NPBWR1P48145 328 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 CDC34P49427 236 aaPredicted RBP2.26□□□□□ -2.05
LINC00393-201ENST00000443621 MEOX2P50222 304 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 ATP5J2P56134 94 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 YPEL3P61236 119 aaPredicted RBP2.26□□□□□ -2.05
LINC00393-201ENST00000443621 ARF6P62330 175 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 SUMO1P63165 101 aaKnown RBP2.26□□□□□ -2.05
LINC00393-201ENST00000443621 MEF2BQ02080 365 aaPredicted RBP2.26□□□□□ -2.05
LINC00393-201ENST00000443621 WT1-ASQ06250 92 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 ZNF616Q08AN1 781 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 SCGB2A2Q13296 93 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 PDE6HQ13956 83 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 GAMTQ14353 236 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 LTC4SQ16873 150 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 MRGPRG-AS1Q2M3A8 158 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 ARSJQ5FYB0 599 aaPredicted RBP2.26□□□□□ -2.05
LINC00393-201ENST00000443621 SOHLH1Q5JUK2 328 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 FAM74A1Q5RGS3 127 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 AVPI1Q5T686 147 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 OR8G2PQ6IF36 304 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 TMEM182Q6ZP80 229 aaPredicted RBP2.26□□□□□ -2.05
LINC00393-201ENST00000443621 MOB3BQ86TA1 216 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 TMEM86BQ8N661 226 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 LINC01356Q8N9X3 169 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 OR10G9Q8NGN4 311 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 OR10G7Q8NGN6 311 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 OR5R1Q8NH85 324 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 SGMS2Q8NHU3 365 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 UBALD1Q8TB05 177 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 FAM213BQ8TBF2 198 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 ABHD5Q8WTS1 349 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 SFT2D1Q8WV19 159 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 TMEM170AQ8WVE7 144 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 WFDC12Q8WWY7 111 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 SRSF12Q8WXF0 261 aaKnown RBP2.26□□□□□ -2.05
LINC00393-201ENST00000443621 RAB24Q969Q5 203 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 RCC1LQ96I51 464 aaKnown RBP2.26□□□□□ -2.05
LINC00393-201ENST00000443621 GPR82Q96P67 336 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 BBC3Q96PG8 261 aaPredicted RBP2.26□□□□□ -2.05
LINC00393-201ENST00000443621 TBX15Q96SF7 602 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 NIPSNAP3BQ9BS92 247 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 SLC25A33Q9BSK2 321 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 GGTLC1Q9BX51 225 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 SMIM3Q9BZL3 60 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 BPESC1Q9GZL8 116 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 MAP1LC3BQ9GZQ8 125 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 EIF5A2Q9GZV4 153 aaKnown RBP2.26□□□□□ -2.05
LINC00393-201ENST00000443621 DNAJC4Q9NNZ3 241 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 TECRQ9NZ01 308 aaKnown RBP2.26□□□□□ -2.05
LINC00393-201ENST00000443621 PLA2G2EQ9NZK7 142 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 TMEM14CQ9P0S9 112 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 ONECUT1Q9UBC0 465 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 METTL1Q9UBP6 276 aaKnown RBP2.26□□□□□ -2.05
LINC00393-201ENST00000443621 PXMP4Q9Y6I8 212 aa2.26□□□□□ -2.05
LINC00393-201ENST00000443621 TET2Q6N021 2002 aaPredicted RBP2.25□□□□□ -2.05
LINC00393-201ENST00000443621 USP24Q9UPU5 2620 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 DCHS2Q6V1P9 2916 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 ABCA4P78363 2273 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 SMG1Q96Q15 3661 aaKnown RBP2.25□□□□□ -2.05
LINC00393-201ENST00000443621 KMT2BQ9UMN6 2715 aaPredicted RBP2.25□□□□□ -2.05
LINC00393-201ENST00000443621 IGLV11-55A0A075B6I3 123 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 A0A096LNT2 108 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 TRBV7-1A0A0A6YYK4 115 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 TRBV9A0A0B4J1U6 114 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 TRAV3A0A0B4J244 114 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 IGHV1-69DA0A0B4J2H0 117 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 TRBV6-1A0A0K0K1D8 114 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 CENPVL3A0A0U1RRI6 287 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 UBE2L5PA0A1B0GUS4 154 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 LOC102723971A0A1B0GUV8 181 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 A0A1W2PPE3 182 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 CGB1A6NKQ9 187 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 FAM223BA6NKX1 122 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 LYNX1G3V0Z9 82 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 H3BP45 60 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 I3L2K1 104 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 J3QKU1 62 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 TSPAN4O14817 238 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 TIMM23O14925 209 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 PPP1R2P9O14990 202 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 NPFFO15130 113 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 SLC25A17O43808 307 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 ZNF253O75346 499 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 OR2C1O95371 312 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 FSHBP01225 129 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 IGKV1D-33P01593 117 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 IGKV1-33P01594 117 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 IGHV1-69P01742 117 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 IGHG2P01859 326 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 APOC3P02656 99 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 MT-ND4LP03901 98 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 SRP19P09132 144 aaKnown RBP2.25□□□□□ -2.05
LINC00393-201ENST00000443621 SFTA3P0C7M3 94 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 LINC00869P0C866 280 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 C8orf88P0DMB2 117 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 OR13C7P0DN81 318 aa2.25□□□□□ -2.05
LINC00393-201ENST00000443621 LYNX1P0DP58 116 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms