RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 SPATA12Q7Z6I5 190 aa9.92□□□□□ -0.82
LINC00642-202ENST00000442515 TMEM203Q969S6 136 aa9.92□□□□□ -0.82
LINC00642-202ENST00000442515 AGRNO00468 2067 aa9.92□□□□□ -0.82
LINC00642-202ENST00000442515 RBFOX2O43251 390 aaKnown RBP eCLIP9.91□□□□□ -0.82
LINC00642-202ENST00000442515 INAFM2P0DMQ5 153 aa9.91□□□□□ -0.82
LINC00642-202ENST00000442515 NQO2P16083 231 aa9.91□□□□□ -0.82
LINC00642-202ENST00000442515 ACTL10Q5JWF8 245 aa9.91□□□□□ -0.82
LINC00642-202ENST00000442515 HES5Q5TA89 166 aa9.91□□□□□ -0.82
LINC00642-202ENST00000442515 C6orf223Q8N319 242 aa9.91□□□□□ -0.82
LINC00642-202ENST00000442515 DUSP18Q8NEJ0 188 aa9.91□□□□□ -0.82
LINC00642-202ENST00000442515 LSM10Q969L4 123 aaKnown RBP9.91□□□□□ -0.82
LINC00642-202ENST00000442515 GINS3Q9BRX5 216 aa9.91□□□□□ -0.82
LINC00642-202ENST00000442515 NXF2Q9GZY0 626 aaKnown RBP9.91□□□□□ -0.82
LINC00642-202ENST00000442515 RNF167Q9H6Y7 350 aa9.91□□□□□ -0.82
LINC00642-202ENST00000442515 NDUFA4L2Q9NRX3 87 aa9.91□□□□□ -0.82
LINC00642-202ENST00000442515 NDUFB11Q9NX14 153 aa9.91□□□□□ -0.82
LINC00642-202ENST00000442515 TEX50A0A1B0GTY4 177 aa9.9□□□□□ -0.82
LINC00642-202ENST00000442515 SULT1C2O00338 296 aa9.9□□□□□ -0.82
LINC00642-202ENST00000442515 ZNF688P0C7X2 276 aa9.9□□□□□ -0.82
LINC00642-202ENST00000442515 HSMCR30P0CW71 290 aa9.9□□□□□ -0.82
LINC00642-202ENST00000442515 CTF1Q16619 201 aa9.9□□□□□ -0.82
LINC00642-202ENST00000442515 TMEM91Q6ZNR0 172 aa9.9□□□□□ -0.82
LINC00642-202ENST00000442515 DMBX1Q8NFW5 382 aa9.9□□□□□ -0.82
LINC00642-202ENST00000442515 OR1L8Q8NGR8 309 aa9.9□□□□□ -0.82
LINC00642-202ENST00000442515 HINT2Q9BX68 163 aa9.9□□□□□ -0.82
LINC00642-202ENST00000442515 DCSTAMPQ9H295 470 aa9.9□□□□□ -0.82
LINC00642-202ENST00000442515 K7EQG2 157 aa9.89□□□□□ -0.83
LINC00642-202ENST00000442515 HPRT1P00492 218 aa9.89□□□□□ -0.83
LINC00642-202ENST00000442515 SPART-AS1P0CW21 52 aa9.89□□□□□ -0.83
LINC00642-202ENST00000442515 EMP1P54849 157 aa9.89□□□□□ -0.83
LINC00642-202ENST00000442515 CNIH2Q6PI25 160 aa9.89□□□□□ -0.83
LINC00642-202ENST00000442515 TOMM20LQ6UXN7 152 aa9.89□□□□□ -0.83
LINC00642-202ENST00000442515 STXBP6Q8NFX7 210 aa9.89□□□□□ -0.83
LINC00642-202ENST00000442515 UFD1Q92890 307 aa9.89□□□□□ -0.83
LINC00642-202ENST00000442515 SLC25A46Q96AG3 418 aa9.89□□□□□ -0.83
LINC00642-202ENST00000442515 GRAMD2BQ96HH9 432 aa9.89□□□□□ -0.83
LINC00642-202ENST00000442515 NAA50Q9GZZ1 169 aaKnown RBP9.89□□□□□ -0.83
LINC00642-202ENST00000442515 CCL28Q9NRJ3 127 aa9.89□□□□□ -0.83
LINC00642-202ENST00000442515 V9GY05 133 aa9.89□□□□□ -0.83
LINC00642-202ENST00000442515 NBDYA0A0U1RRE5 68 aa9.88□□□□□ -0.83
LINC00642-202ENST00000442515 I3L2K1 104 aa9.88□□□□□ -0.83
LINC00642-202ENST00000442515 ARL6IP5O75915 188 aa9.88□□□□□ -0.83
LINC00642-202ENST00000442515 HTN3P15516 51 aa9.88□□□□□ -0.83
LINC00642-202ENST00000442515 PSMA1P25786 263 aaKnown RBP9.88□□□□□ -0.83
LINC00642-202ENST00000442515 CALRP27797 417 aaKnown RBP9.88□□□□□ -0.83
LINC00642-202ENST00000442515 RANBP1P43487 201 aa9.88□□□□□ -0.83
LINC00642-202ENST00000442515 MFAP4P55083 255 aa9.88□□□□□ -0.83
LINC00642-202ENST00000442515 FAM3BP58499 235 aaPredicted RBP9.88□□□□□ -0.83
LINC00642-202ENST00000442515 SECTM1Q8WVN6 248 aa9.88□□□□□ -0.83
LINC00642-202ENST00000442515 TSC22D3Q99576 134 aa9.88□□□□□ -0.83
LINC00642-202ENST00000442515 TMED3Q9Y3Q3 217 aa9.88□□□□□ -0.83
LINC00642-202ENST00000442515 IGHV3-48P01763 117 aa9.87□□□□□ -0.83
LINC00642-202ENST00000442515 RAB6AP20340 208 aa9.87□□□□□ -0.83
LINC00642-202ENST00000442515 KRTAP10-2P60368 255 aa9.87□□□□□ -0.83
LINC00642-202ENST00000442515 RPS25P62851 125 aaKnown RBP9.87□□□□□ -0.83
LINC00642-202ENST00000442515 CATR1Q13166 79 aa9.87□□□□□ -0.83
LINC00642-202ENST00000442515 MSMO1Q15800 293 aa9.87□□□□□ -0.83
LINC00642-202ENST00000442515 TMEM88Q6PEY1 159 aa9.87□□□□□ -0.83
LINC00642-202ENST00000442515 OR1P1Q8NH06 330 aa9.87□□□□□ -0.83
LINC00642-202ENST00000442515 NUDCD2Q8WVJ2 157 aa9.87□□□□□ -0.83
LINC00642-202ENST00000442515 MISP3Q96FF7 219 aa9.87□□□□□ -0.83
LINC00642-202ENST00000442515 TXN2Q99757 166 aa9.87□□□□□ -0.83
LINC00642-202ENST00000442515 ZFAND3Q9H8U3 227 aa9.87□□□□□ -0.83
LINC00642-202ENST00000442515 PLEKHA2Q9HB19 425 aa9.87□□□□□ -0.83
LINC00642-202ENST00000442515 XCL2Q9UBD3 114 aa9.87□□□□□ -0.83
LINC00642-202ENST00000442515 NACAE9PAV3 2078 aa9.87□□□□□ -0.83
LINC00642-202ENST00000442515 TMEM189A5PLL7 270 aa9.86□□□□□ -0.83
LINC00642-202ENST00000442515 GNG7O60262 68 aa9.86□□□□□ -0.83
LINC00642-202ENST00000442515 TRAM1Q15629 374 aa9.86□□□□□ -0.83
LINC00642-202ENST00000442515 OR51H1Q8NH63 302 aa9.86□□□□□ -0.83
LINC00642-202ENST00000442515 DCANP1Q8TF63 244 aa9.86□□□□□ -0.83
LINC00642-202ENST00000442515 C1QTNF4Q9BXJ3 329 aa9.86□□□□□ -0.83
LINC00642-202ENST00000442515 TMEM231Q9H6L2 316 aa9.86□□□□□ -0.83
LINC00642-202ENST00000442515 COMMD9Q9P000 198 aa9.86□□□□□ -0.83
LINC00642-202ENST00000442515 DKK2Q9UBU2 259 aa9.86□□□□□ -0.83
LINC00642-202ENST00000442515 ANXA10Q9UJ72 324 aa9.86□□□□□ -0.83
LINC00642-202ENST00000442515 NSG2Q9Y328 171 aa9.86□□□□□ -0.83
LINC00642-202ENST00000442515 OR51B2Q9Y5P1 312 aa9.86□□□□□ -0.83
LINC00642-202ENST00000442515 PUS1Q9Y606 427 aaKnown RBP eCLIP9.86□□□□□ -0.83
LINC00642-202ENST00000442515 METTL21EPA6NDL7 271 aa9.85□□□□□ -0.83
LINC00642-202ENST00000442515 MARCH11A6NNE9 402 aa9.85□□□□□ -0.83
LINC00642-202ENST00000442515 MT-CO2P00403 227 aa9.85□□□□□ -0.83
LINC00642-202ENST00000442515 FGF9P31371 208 aaPredicted RBP9.85□□□□□ -0.83
LINC00642-202ENST00000442515 ERVK-16P61578 105 aa9.85□□□□□ -0.83
LINC00642-202ENST00000442515 SPCS2Q15005 226 aa9.85□□□□□ -0.83
LINC00642-202ENST00000442515 ARL6IP1Q15041 203 aa9.85□□□□□ -0.83
LINC00642-202ENST00000442515 FAM222AQ5U5X8 452 aa9.85□□□□□ -0.83
LINC00642-202ENST00000442515 HACD4Q5VWC8 232 aa9.85□□□□□ -0.83
LINC00642-202ENST00000442515 ZNF705AQ6ZN79 300 aaPredicted RBP9.85□□□□□ -0.83
LINC00642-202ENST00000442515 ZBTB34Q8NCN2 500 aa9.85□□□□□ -0.83
LINC00642-202ENST00000442515 RAB40CQ96S21 281 aa9.85□□□□□ -0.83
LINC00642-202ENST00000442515 NEU1Q99519 415 aa9.85□□□□□ -0.83
LINC00642-202ENST00000442515 NIPSNAP3BQ9BS92 247 aa9.85□□□□□ -0.83
LINC00642-202ENST00000442515 ATG101Q9BSB4 218 aa9.85□□□□□ -0.83
LINC00642-202ENST00000442515 SSR3Q9UNL2 185 aa9.85□□□□□ -0.83
LINC00642-202ENST00000442515 TEX48A0A1B0GUV7 120 aa9.84□□□□□ -0.83
LINC00642-202ENST00000442515 TRDV1A0A1B0GX56 115 aa9.84□□□□□ -0.83
LINC00642-202ENST00000442515 OR10A3P58181 314 aa9.84□□□□□ -0.83
LINC00642-202ENST00000442515 VBP1P61758 197 aa9.84□□□□□ -0.83
LINC00642-202ENST00000442515 NUTF2P61970 127 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms