RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 COMMD5Q9GZQ3 224 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 RNF114Q9Y508 228 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 F11RQ9Y624 299 aaKnown RBP2.34□□□□□ -2.03
LIG4-203ENST00000442234 MED12LQ86YW9 2145 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 LCTP09848 1927 aa2.34□□□□□ -2.03
LIG4-203ENST00000442234 TRBV5-5A0A0J9YX44 114 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 F8W1H4 67 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 RER1O15258 196 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 TMPRSS2O15393 492 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 NDUFB4O95168 129 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 HLA-DQA1P01909 254 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 BLVRBP30043 206 aaPredicted RBP2.34□□□□□ -2.04
LIG4-203ENST00000442234 FOLR3P41439 243 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 CLRN1P58418 232 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 PFN3P60673 137 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 YPEL3P61236 119 aaPredicted RBP2.34□□□□□ -2.04
LIG4-203ENST00000442234 ZFP36L1Q07352 338 aaKnown RBP2.34□□□□□ -2.04
LIG4-203ENST00000442234 SRSF1Q07955 248 aaKnown RBP eCLIP2.34□□□□□ -2.04
LIG4-203ENST00000442234 CD226Q15762 336 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 RTL8BQ17RB0 113 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 OR10J3Q5JRS4 329 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 DUX4L9Q6RFH8 374 aaPredicted RBP2.34□□□□□ -2.04
LIG4-203ENST00000442234 SLC22A24Q8N4F4 322 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 C10orf126Q8N4M7 172 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 OSR1Q8TAX0 266 aaPredicted RBP2.34□□□□□ -2.04
LIG4-203ENST00000442234 APOBEC3DQ96AK3 386 aaPredicted RBP2.34□□□□□ -2.04
LIG4-203ENST00000442234 MMABQ96EY8 250 aaPredicted RBP2.34□□□□□ -2.04
LIG4-203ENST00000442234 ADTRPQ96IZ2 230 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 SPACA5Q96QH8 159 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 JMJD8Q96S16 334 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 VGLL1Q99990 258 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 HES7Q9BYE0 225 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 PRRG4Q9BZD6 226 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 OR10A2Q9H208 303 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 NAA60Q9H7X0 242 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 WDR76Q9H967 626 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 SAP30LQ9HAJ7 183 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 PELI2Q9HAT8 420 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 BCL2L10Q9HD36 194 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 RAB9BQ9NP90 201 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 TDRD15B5MCY1 1934 aaKnown RBP2.34□□□□□ -2.04
LIG4-203ENST00000442234 PDCD11Q14690 1871 aaKnown RBP2.34□□□□□ -2.04
LIG4-203ENST00000442234 SPTY2D1-AS1A0A0U1RR47 76 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 UBE2L5PA0A1B0GUS4 154 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 LOC102725191A0A1B0GVB3 256 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 A0A1W2PRE2 83 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 PRSS38A1L453 326 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 PRSS37A4D1T9 235 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 CCDC179H3BU77 68 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 PLPP1O14494 284 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 SOCS1O15524 211 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 DNPH1O43598 174 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 EML2O95834 649 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 IFITM1P13164 125 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 TNFRSF1AP19438 455 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 RGRP47804 291 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 NMUP48645 174 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 RPL34P49207 117 aaKnown RBP2.34□□□□□ -2.04
LIG4-203ENST00000442234 CTXN1P60606 82 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 CXorf66Q5JRM2 361 aaPredicted RBP2.34□□□□□ -2.04
LIG4-203ENST00000442234 Q6ZUT4 128 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 PLXDC1Q8IUK5 500 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 MMD2Q8IY49 270 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 LILRA3Q8N6C8 439 aaPredicted RBP2.34□□□□□ -2.04
LIG4-203ENST00000442234 LRTM2Q8N967 370 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 OR1L8Q8NGR8 309 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 LINC01560Q8TB33 94 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 TSKUQ8WUA8 353 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 RCHY1Q96PM5 261 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 AGMATQ9BSE5 352 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 MS4A6AQ9H2W1 248 aa2.34□□□□□ -2.04
LIG4-203ENST00000442234 LOC102723996A0A087X1L8 192 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 TRAV1-1A0A0B4J248 108 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 IGHV5-10-1A0A0J9YXX1 117 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 LOC107986453A0A1B0GWG9 222 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 FNDC10F2Z333 226 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 LMO7DNF2Z398 122 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 MLNRO43193 412 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 OR5AL1P0C617 328 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 CISD3P0C7P0 127 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 ZNF823P16415 610 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 FSTP19883 344 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 PPIFP30405 207 aaKnown RBP2.33□□□□□ -2.04
LIG4-203ENST00000442234 GNG5P63218 68 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 POU3F1Q03052 451 aaPredicted RBP2.33□□□□□ -2.04
LIG4-203ENST00000442234 MZT1Q08AG7 82 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 KLRD1Q13241 179 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 PSG5Q15238 335 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 LYRM7Q5U5X0 104 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 ANKRD37Q7Z713 158 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 MARCH3Q86UD3 253 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 RBMXL3Q8N7X1 1067 aaKnown RBP2.33□□□□□ -2.04
LIG4-203ENST00000442234 TMEM116Q8NCL8 245 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 OR5P3Q8WZ94 311 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 NEUROG1Q92886 237 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 DDIT4LQ96D03 193 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 ARHGAP5-AS1Q96IT6 56 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 SDF2Q99470 211 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 LYSTQ99698 3801 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 FAM173AQ9BQD7 235 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms