RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 UPK1BO75841 260 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 IGHG2P01859 326 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 SLC35G6P0C7Q6 338 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 FKBP2P26885 142 aaKnown RBP2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 CD70P32970 193 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 LPAR6P43657 344 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 NCBP2P52298 156 aaKnown RBP eCLIP2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 H2BFSP57053 126 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 CASC10Q5T4H9 136 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 LHFPL1Q86WI0 220 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 CEND1Q8N111 149 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 OR52R1Q8NGF1 315 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 OR10J6PQ8NGY7 276 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 LINC01587Q99440 93 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 PBOV1Q9GZY1 135 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 ZNF226Q9NYT6 803 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 ZNF629Q9UEG4 869 aaPredicted RBP2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 RPUSD1Q9UJJ7 312 aaKnown RBP2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 NEUROG3Q9Y4Z2 214 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 F11RQ9Y624 299 aaKnown RBP2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 KCNE3Q9Y6H6 103 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 GCC2Q8IWJ2 1684 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 DYSFO75923 2080 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 SIPA1L1O43166 1804 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 N4BP2Q86UW6 1770 aaPredicted RBP2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 TET2Q6N021 2002 aaPredicted RBP2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 LAMA2P24043 3122 aaKnown RBP2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 hCG_1818297A0A087WSY0 165 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 TRAV5A0A0B4J249 113 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 A8MT66 165 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 FNDC10F2Z333 226 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 KRTAP4-16G5E9R7 235 aaPredicted RBP2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 J3QR89 54 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 OR5AC1P0C628 307 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 SPINK8P0C7L1 97 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 IGLC1P0CG04 106 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 IGHV3-43DP0DP04 118 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 RPS24P62847 133 aaKnown RBP2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 PNOCQ13519 176 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 SP6Q3SY56 376 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 PAGE3Q5JUK9 113 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 TMEM14EPQ6UXP3 125 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 TCF23Q7RTU1 214 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 SAXO1Q8IYX7 474 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 ANKRD29Q8N6D5 301 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 METTL26Q96S19 204 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 GINS4Q9BRT9 223 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 ZNF586Q9NXT0 402 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 NSD3Q9BZ95 1437 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 TTC28Q96AY4 2481 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 TRAV8-2A0A0B4J237 113 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 KNCNA6PVL3 124 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 B4DEV8 164 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 PDCD6O75340 191 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 ERGP11308 486 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 PSMB9P28065 219 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 RBMXP38159 391 aaKnown RBP2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 SLC18A1P54219 525 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 HLA-DRB3P79483 266 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 LOXL1Q08397 574 aaPredicted RBP2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 TDRG1Q3Y452 100 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 Q499Y3 187 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 HIGD2BQ4VC39 106 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 TCEAL5Q5H9L2 206 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 TTC32Q5I0X7 151 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 C10orf91Q5T1B1 145 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 LYRM7Q5U5X0 104 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 NPWQ8N729 165 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 YIPF7Q8N8F6 280 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 C11orf72Q8NBR9 251 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 LY6G5BQ8NDX9 201 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 PPTC7Q8NI37 304 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 LMX1AQ8TE12 382 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 IGF2BP2-AS1Q96M15 143 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 SMCO4Q9NRQ5 59 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 WASHC3Q9Y3C0 194 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 KMT2EQ8IZD2 1858 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 CEP290O15078 2479 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 PARP14Q460N5 1801 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 ATG2BQ96BY7 2078 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 MUC3AQ02505 3323 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 FAM236AA0A1B0GUQ0 79 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 FAM236BA0A1B0GV22 79 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 GGT3PA6NGU5 568 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 FAM183AA6NL82 134 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 GGTLC3B5MD39 225 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 K7EPK0 472 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 PPP1CCP36873 323 aaKnown RBP2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 CCR2P41597 374 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 CENPWQ5EE01 88 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 FKBP1CQ5VVH2 108 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 NXNL2Q5VZ03 156 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 AMMECR1LQ6DCA0 310 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 UNQ5815/PRO19632Q6UWF5 114 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 TEX43Q6ZNM6 134 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 Q6ZRU5 148 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 RNF175Q8N4F7 328 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 TTC9CQ8N5M4 171 aa2.94□□□□□ -1.94
CDC42BPA-207ENST00000441725 FAM71E2Q8N5Q1 922 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms