RNA–Protein interactions for RNA: ENST00000440702.5

FAM20B-202, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

TSL 3

Gene FAM20B, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-202ENST00000440702 ST8SIA3O43173 380 aa12.53□□□□□ -0.4
FAM20B-202ENST00000440702 IGKV1-39P01597 117 aa12.53□□□□□ -0.4
FAM20B-202ENST00000440702 APOHP02749 345 aaPredicted RBP12.53□□□□□ -0.4
FAM20B-202ENST00000440702 IGKV1D-39P04432 117 aa12.53□□□□□ -0.4
FAM20B-202ENST00000440702 NAT1P18440 290 aa12.53□□□□□ -0.4
FAM20B-202ENST00000440702 PRSS3P35030 304 aa12.53□□□□□ -0.4
FAM20B-202ENST00000440702 TSPAN5P62079 268 aa12.53□□□□□ -0.4
FAM20B-202ENST00000440702 LSM3P62310 102 aaKnown RBP12.53□□□□□ -0.4
FAM20B-202ENST00000440702 PRR20EP86478 221 aa12.53□□□□□ -0.4
FAM20B-202ENST00000440702 PRR20CP86479 221 aa12.53□□□□□ -0.4
FAM20B-202ENST00000440702 PRR20DP86480 221 aa12.53□□□□□ -0.4
FAM20B-202ENST00000440702 PRR20BP86481 221 aa12.53□□□□□ -0.4
FAM20B-202ENST00000440702 PRR20AP86496 221 aa12.53□□□□□ -0.4
FAM20B-202ENST00000440702 FAM90A2PQ658T7 463 aa12.53□□□□□ -0.4
FAM20B-202ENST00000440702 MRGPRFQ96AM1 343 aa12.53□□□□□ -0.4
FAM20B-202ENST00000440702 SEC22AQ96IW7 307 aa12.53□□□□□ -0.4
FAM20B-202ENST00000440702 TXN2Q99757 166 aa12.53□□□□□ -0.4
FAM20B-202ENST00000440702 MFFQ9GZY8 342 aa12.53□□□□□ -0.4
FAM20B-202ENST00000440702 DNAH6Q9C0G6 4158 aa12.52□□□□□ -0.4
FAM20B-202ENST00000440702 HERC2O95714 4834 aa12.52□□□□□ -0.4
FAM20B-202ENST00000440702 DNASE2O00115 360 aaPredicted RBP12.52□□□□□ -0.41
FAM20B-202ENST00000440702 S100GP29377 79 aa12.52□□□□□ -0.41
FAM20B-202ENST00000440702 DEFB131AP59861 70 aa12.52□□□□□ -0.41
FAM20B-202ENST00000440702 RPL11P62913 178 aaKnown RBP12.52□□□□□ -0.41
FAM20B-202ENST00000440702 PAFAH1B2P68402 229 aa12.52□□□□□ -0.41
FAM20B-202ENST00000440702 PRCDQ00LT1 54 aa12.52□□□□□ -0.41
FAM20B-202ENST00000440702 IZUMO4Q1ZYL8 232 aa12.52□□□□□ -0.41
FAM20B-202ENST00000440702 TOMM20LQ6UXN7 152 aa12.52□□□□□ -0.41
FAM20B-202ENST00000440702 LYSMD2Q8IV50 215 aa12.52□□□□□ -0.41
FAM20B-202ENST00000440702 CADM3Q8N126 398 aa12.52□□□□□ -0.41
FAM20B-202ENST00000440702 LILRB2Q8N423 598 aa12.52□□□□□ -0.41
FAM20B-202ENST00000440702 FAM24BQ8N5W8 94 aa12.52□□□□□ -0.41
FAM20B-202ENST00000440702 GINS3Q9BRX5 216 aa12.52□□□□□ -0.41
FAM20B-202ENST00000440702 DFFBO76075 338 aa12.51□□□□□ -0.41
FAM20B-202ENST00000440702 RPS19P39019 145 aaKnown RBP12.51□□□□□ -0.41
FAM20B-202ENST00000440702 TMEM187Q14656 261 aa12.51□□□□□ -0.41
FAM20B-202ENST00000440702 CROCCP3Q8IVE0 287 aa12.51□□□□□ -0.41
FAM20B-202ENST00000440702 MS4A6AQ9H2W1 248 aa12.51□□□□□ -0.41
FAM20B-202ENST00000440702 RABAC1Q9UI14 185 aa12.51□□□□□ -0.41
FAM20B-202ENST00000440702 VPS13DQ5THJ4 4388 aa12.51□□□□□ -0.41
FAM20B-202ENST00000440702 TMEM127O75204 238 aa12.5□□□□□ -0.41
FAM20B-202ENST00000440702 ERHP84090 104 aaKnown RBP12.5□□□□□ -0.41
FAM20B-202ENST00000440702 SNX29P2Q8IUI4 249 aa12.5□□□□□ -0.41
FAM20B-202ENST00000440702 ZNF114Q8NC26 417 aa12.5□□□□□ -0.41
FAM20B-202ENST00000440702 C2CD4CQ8TF44 421 aa12.5□□□□□ -0.41
FAM20B-202ENST00000440702 PUS1Q9Y606 427 aaKnown RBP eCLIP12.5□□□□□ -0.41
FAM20B-202ENST00000440702 HECTD4Q9Y4D8 3996 aa12.5□□□□□ -0.41
FAM20B-202ENST00000440702 HSPE1P61604 102 aaKnown RBP12.49□□□□□ -0.41
FAM20B-202ENST00000440702 LPCAT3Q6P1A2 487 aa12.49□□□□□ -0.41
FAM20B-202ENST00000440702 SLC35G3Q8N808 338 aa12.49□□□□□ -0.41
FAM20B-202ENST00000440702 DUSP18Q8NEJ0 188 aa12.49□□□□□ -0.41
FAM20B-202ENST00000440702 VSIRQ9H7M9 311 aa12.49□□□□□ -0.41
FAM20B-202ENST00000440702 IGLL5B9A064 214 aa12.48□□□□□ -0.41
FAM20B-202ENST00000440702 M0QYG6 137 aa12.48□□□□□ -0.41
FAM20B-202ENST00000440702 NPBWR1P48145 328 aa12.48□□□□□ -0.41
FAM20B-202ENST00000440702 RNASE12Q5GAN4 147 aaKnown RBP12.48□□□□□ -0.41
FAM20B-202ENST00000440702 ZNF600Q6ZNG1 722 aa12.48□□□□□ -0.41
FAM20B-202ENST00000440702 STHQ8IWL8 128 aa12.48□□□□□ -0.41
FAM20B-202ENST00000440702 STXBP6Q8NFX7 210 aa12.48□□□□□ -0.41
FAM20B-202ENST00000440702 GPX8Q8TED1 209 aa12.48□□□□□ -0.41
FAM20B-202ENST00000440702 ZFAND3Q9H8U3 227 aa12.48□□□□□ -0.41
FAM20B-202ENST00000440702 FAM212BQ9NTI7 297 aaPredicted RBP12.48□□□□□ -0.41
FAM20B-202ENST00000440702 A0A1B0GU03 582 aa12.47□□□□□ -0.41
FAM20B-202ENST00000440702 PGAM2P15259 253 aa12.47□□□□□ -0.41
FAM20B-202ENST00000440702 PI3P19957 117 aa12.47□□□□□ -0.41
FAM20B-202ENST00000440702 SNCAP37840 140 aa12.47□□□□□ -0.41
FAM20B-202ENST00000440702 KCTD21Q4G0X4 260 aa12.47□□□□□ -0.41
FAM20B-202ENST00000440702 COMMD3Q9UBI1 195 aa12.47□□□□□ -0.41
FAM20B-202ENST00000440702 IGHV4-28A0A0C4DH34 117 aa12.46□□□□□ -0.41
FAM20B-202ENST00000440702 IGKV1-5P01602 117 aa12.46□□□□□ -0.41
FAM20B-202ENST00000440702 CD5P06127 495 aa12.46□□□□□ -0.41
FAM20B-202ENST00000440702 RCVRNP35243 200 aa12.46□□□□□ -0.41
FAM20B-202ENST00000440702 HOXA1P49639 335 aaPredicted RBP12.46□□□□□ -0.41
FAM20B-202ENST00000440702 Q8NAQ8 132 aa12.46□□□□□ -0.41
FAM20B-202ENST00000440702 YIPF6Q96EC8 236 aa12.46□□□□□ -0.41
FAM20B-202ENST00000440702 KNCNA6PVL3 124 aa12.45□□□□□ -0.42
FAM20B-202ENST00000440702 TMEM50AO95807 157 aa12.45□□□□□ -0.42
FAM20B-202ENST00000440702 IFNA17P01571 189 aa12.45□□□□□ -0.42
FAM20B-202ENST00000440702 ZNF688P0C7X2 276 aa12.45□□□□□ -0.42
FAM20B-202ENST00000440702 AKR1C2P52895 323 aa12.45□□□□□ -0.42
FAM20B-202ENST00000440702 PPP5CP53041 499 aa12.45□□□□□ -0.42
FAM20B-202ENST00000440702 UCP3P55916 312 aa12.45□□□□□ -0.42
FAM20B-202ENST00000440702 TMEM231Q9H6L2 316 aa12.45□□□□□ -0.42
FAM20B-202ENST00000440702 MRPL36Q9P0J6 103 aaKnown RBP12.45□□□□□ -0.42
FAM20B-202ENST00000440702 APLNQ9ULZ1 77 aa12.45□□□□□ -0.42
FAM20B-202ENST00000440702 SMIM31A0A1B0GVY4 71 aa12.44□□□□□ -0.42
FAM20B-202ENST00000440702 GIG44P09565 113 aaPredicted RBP12.44□□□□□ -0.42
FAM20B-202ENST00000440702 RBMY1A1P0DJD3 496 aaKnown RBP12.44□□□□□ -0.42
FAM20B-202ENST00000440702 RBMY1CP0DJD4 496 aa12.44□□□□□ -0.42
FAM20B-202ENST00000440702 C4BPBP20851 252 aa12.44□□□□□ -0.42
FAM20B-202ENST00000440702 NPPCP23582 126 aa12.44□□□□□ -0.42
FAM20B-202ENST00000440702 RBMY1FQ15415 496 aaKnown RBP12.44□□□□□ -0.42
FAM20B-202ENST00000440702 TP53RKQ96S44 253 aa12.44□□□□□ -0.42
FAM20B-202ENST00000440702 PDCD10Q9BUL8 212 aa12.44□□□□□ -0.42
FAM20B-202ENST00000440702 SCPEP1Q9HB40 452 aa12.44□□□□□ -0.42
FAM20B-202ENST00000440702 CLEC5AQ9NY25 188 aa12.44□□□□□ -0.42
FAM20B-202ENST00000440702 TRAV2A0A0B4J234 112 aa12.43□□□□□ -0.42
FAM20B-202ENST00000440702 A0A0B4J293 547 aa12.43□□□□□ -0.42
FAM20B-202ENST00000440702 RNASE2P10153 161 aaKnown RBP12.43□□□□□ -0.42
FAM20B-202ENST00000440702 HLA-DMBP28068 263 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms