RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 VN1R17PQ8TDU5 208 aa13.78□□□□□ -0.2
CPSF4-205ENST00000440514 ATP6V0BQ99437 205 aa13.78□□□□□ -0.2
CPSF4-205ENST00000440514 TMED3Q9Y3Q3 217 aa13.78□□□□□ -0.2
CPSF4-205ENST00000440514 PRKDCP78527 4128 aaKnown RBP13.78□□□□□ -0.2
CPSF4-205ENST00000440514 WI2-2373I1.2A0A1W2PRP0 233 aa13.77□□□□□ -0.21
CPSF4-205ENST00000440514 GGCTO75223 188 aaKnown RBP13.77□□□□□ -0.21
CPSF4-205ENST00000440514 OR2C1O95371 312 aa13.77□□□□□ -0.21
CPSF4-205ENST00000440514 ANXA7P20073 488 aaKnown RBP13.77□□□□□ -0.21
CPSF4-205ENST00000440514 SNCAP37840 140 aa13.77□□□□□ -0.21
CPSF4-205ENST00000440514 INSL3P51460 131 aa13.77□□□□□ -0.21
CPSF4-205ENST00000440514 SPCS3P61009 180 aa13.77□□□□□ -0.21
CPSF4-205ENST00000440514 ASAH1Q13510 395 aa13.77□□□□□ -0.21
CPSF4-205ENST00000440514 REC114Q7Z4M0 266 aa13.77□□□□□ -0.21
CPSF4-205ENST00000440514 NOXA1Q86UR1 476 aa13.77□□□□□ -0.21
CPSF4-205ENST00000440514 SCARB1Q8WTV0 552 aa13.77□□□□□ -0.21
CPSF4-205ENST00000440514 OR4C12Q96R67 309 aa13.77□□□□□ -0.21
CPSF4-205ENST00000440514 GAR1Q9NY12 217 aaKnown RBP13.77□□□□□ -0.21
CPSF4-205ENST00000440514 A0A1B0GU03 582 aa13.76□□□□□ -0.21
CPSF4-205ENST00000440514 C9orf170A2RU37 121 aa13.76□□□□□ -0.21
CPSF4-205ENST00000440514 LY86O95711 162 aa13.76□□□□□ -0.21
CPSF4-205ENST00000440514 CLEC3BP05452 202 aa13.76□□□□□ -0.21
CPSF4-205ENST00000440514 RNASE2P10153 161 aaKnown RBP13.76□□□□□ -0.21
CPSF4-205ENST00000440514 SLC25A6P12236 298 aa13.76□□□□□ -0.21
CPSF4-205ENST00000440514 SMCO1Q147U7 214 aa13.76□□□□□ -0.21
CPSF4-205ENST00000440514 C4orf46Q504U0 113 aa13.76□□□□□ -0.21
CPSF4-205ENST00000440514 IL34Q6ZMJ4 242 aa13.76□□□□□ -0.21
CPSF4-205ENST00000440514 ELOVL1Q9BW60 279 aa13.76□□□□□ -0.21
CPSF4-205ENST00000440514 C20orf85Q9H1P6 137 aa13.76□□□□□ -0.21
CPSF4-205ENST00000440514 C21orf62Q9NYP8 219 aa13.76□□□□□ -0.21
CPSF4-205ENST00000440514 TBC1D24Q9ULP9 559 aa13.76□□□□□ -0.21
CPSF4-205ENST00000440514 OR2T8A6NH00 312 aa13.75□□□□□ -0.21
CPSF4-205ENST00000440514 CEBPZOSA8MTT3 80 aa13.75□□□□□ -0.21
CPSF4-205ENST00000440514 F8W735 103 aaPredicted RBP13.75□□□□□ -0.21
CPSF4-205ENST00000440514 I3L2K1 104 aa13.75□□□□□ -0.21
CPSF4-205ENST00000440514 K7EIL1 84 aa13.75□□□□□ -0.21
CPSF4-205ENST00000440514 CORTO00230 105 aa13.75□□□□□ -0.21
CPSF4-205ENST00000440514 MT-CO2P00403 227 aa13.75□□□□□ -0.21
CPSF4-205ENST00000440514 IFNA21P01568 189 aa13.75□□□□□ -0.21
CPSF4-205ENST00000440514 TCRBP04435 133 aa13.75□□□□□ -0.21
CPSF4-205ENST00000440514 OR4E1P0C645 316 aa13.75□□□□□ -0.21
CPSF4-205ENST00000440514 ATP5IP56385 69 aaPredicted RBP13.75□□□□□ -0.21
CPSF4-205ENST00000440514 UBAC2Q8NBM4 344 aa13.75□□□□□ -0.21
CPSF4-205ENST00000440514 MRAPQ8TCY5 172 aa13.75□□□□□ -0.21
CPSF4-205ENST00000440514 PINX1Q96BK5 328 aaKnown RBP13.75□□□□□ -0.21
CPSF4-205ENST00000440514 PRR25Q96S07 402 aa13.75□□□□□ -0.21
CPSF4-205ENST00000440514 IGHV3-35A0A0C4DH35 117 aa13.74□□□□□ -0.21
CPSF4-205ENST00000440514 TGOLN2O43493 480 aa13.74□□□□□ -0.21
CPSF4-205ENST00000440514 IGHV3-48P01763 117 aa13.74□□□□□ -0.21
CPSF4-205ENST00000440514 CSN3P07498 182 aa13.74□□□□□ -0.21
CPSF4-205ENST00000440514 EDN2P20800 178 aa13.74□□□□□ -0.21
CPSF4-205ENST00000440514 DHRS2Q13268 280 aa13.74□□□□□ -0.21
CPSF4-205ENST00000440514 Q56UQ5 140 aa13.74□□□□□ -0.21
CPSF4-205ENST00000440514 LYG2Q86SG7 212 aa13.74□□□□□ -0.21
CPSF4-205ENST00000440514 OR1S1Q8NH92 325 aa13.74□□□□□ -0.21
CPSF4-205ENST00000440514 ENKURQ8TC29 256 aa13.74□□□□□ -0.21
CPSF4-205ENST00000440514 HIPK2Q9H2X6 1198 aa13.74□□□□□ -0.21
CPSF4-205ENST00000440514 HEYLQ9NQ87 328 aaPredicted RBP13.74□□□□□ -0.21
CPSF4-205ENST00000440514 HOXB5P09067 269 aa13.73□□□□□ -0.21
CPSF4-205ENST00000440514 TNFRSF9Q07011 255 aa13.73□□□□□ -0.21
CPSF4-205ENST00000440514 BSXQ3C1V8 233 aa13.73□□□□□ -0.21
CPSF4-205ENST00000440514 PLET1Q6UQ28 207 aa13.73□□□□□ -0.21
CPSF4-205ENST00000440514 CHRDL1Q9BU40 450 aa13.73□□□□□ -0.21
CPSF4-205ENST00000440514 PEMTQ9UBM1 199 aa13.73□□□□□ -0.21
CPSF4-205ENST00000440514 HSPB7Q9UBY9 170 aa13.73□□□□□ -0.21
CPSF4-205ENST00000440514 TRAV6A0A075B6T7 132 aa13.72□□□□□ -0.21
CPSF4-205ENST00000440514 FAM90A26D6RGX4 464 aa13.72□□□□□ -0.21
CPSF4-205ENST00000440514 SCGB2A1O75556 95 aa13.72□□□□□ -0.21
CPSF4-205ENST00000440514 MED6O75586 246 aa13.72□□□□□ -0.21
CPSF4-205ENST00000440514 ADAP1O75689 374 aa13.72□□□□□ -0.21
CPSF4-205ENST00000440514 IGLV1-51P01701 117 aa13.72□□□□□ -0.21
CPSF4-205ENST00000440514 SPNP16150 400 aa13.72□□□□□ -0.21
CPSF4-205ENST00000440514 HTR2BP41595 481 aa13.72□□□□□ -0.21
CPSF4-205ENST00000440514 GGNBP1Q5YKI7 109 aa13.72□□□□□ -0.21
CPSF4-205ENST00000440514 PVRIGQ6DKI7 326 aa13.72□□□□□ -0.21
CPSF4-205ENST00000440514 GPHB5Q86YW7 130 aa13.72□□□□□ -0.21
CPSF4-205ENST00000440514 OR52B4Q8NGK2 314 aa13.72□□□□□ -0.21
CPSF4-205ENST00000440514 BSCL2Q96G97 398 aaPredicted RBP13.72□□□□□ -0.21
CPSF4-205ENST00000440514 RBKSQ9H477 322 aa13.72□□□□□ -0.21
CPSF4-205ENST00000440514 NUDT15Q9NV35 164 aa13.72□□□□□ -0.21
CPSF4-205ENST00000440514 ZNF256Q9Y2P7 627 aaPredicted RBP13.72□□□□□ -0.21
CPSF4-205ENST00000440514 ZNF320A2RRD8 509 aa13.71□□□□□ -0.21
CPSF4-205ENST00000440514 LGALS9O00182 355 aa13.71□□□□□ -0.21
CPSF4-205ENST00000440514 PITX3O75364 302 aa13.71□□□□□ -0.21
CPSF4-205ENST00000440514 H2AFB2P0C5Z0 115 aa13.71□□□□□ -0.21
CPSF4-205ENST00000440514 ADMP35318 185 aa13.71□□□□□ -0.21
CPSF4-205ENST00000440514 IFITM3Q01628 133 aa13.71□□□□□ -0.21
CPSF4-205ENST00000440514 UNQ9165/PRO28630Q6UXU0 137 aa13.71□□□□□ -0.21
CPSF4-205ENST00000440514 ADAMTSL5Q6ZMM2 481 aa13.71□□□□□ -0.21
CPSF4-205ENST00000440514 SLC24A4Q8NFF2 622 aa13.71□□□□□ -0.21
CPSF4-205ENST00000440514 CACNG8Q8WXS5 425 aa13.71□□□□□ -0.21
CPSF4-205ENST00000440514 C2orf70A6NJV1 201 aa13.7□□□□□ -0.22
CPSF4-205ENST00000440514 MFAP4P55083 255 aa13.7□□□□□ -0.22
CPSF4-205ENST00000440514 RPP30P78346 268 aaKnown RBP13.7□□□□□ -0.22
CPSF4-205ENST00000440514 FAM106AQ4KMX7 169 aa13.7□□□□□ -0.22
CPSF4-205ENST00000440514 DTD1Q8TEA8 209 aa13.7□□□□□ -0.22
CPSF4-205ENST00000440514 MITD1Q8WV92 249 aa13.7□□□□□ -0.22
CPSF4-205ENST00000440514 TMEM170AQ8WVE7 144 aa13.7□□□□□ -0.22
CPSF4-205ENST00000440514 TXN2Q99757 166 aa13.7□□□□□ -0.22
CPSF4-205ENST00000440514 ZNF436Q9C0F3 470 aaPredicted RBP13.7□□□□□ -0.22
CPSF4-205ENST00000440514 FNDC4Q9H6D8 234 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms