RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 C20orf24Q9BUV8 137 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 TMEM147Q9BVK8 224 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 TPPP3Q9BW30 176 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 ZNF665Q9H7R5 613 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 BIN3Q9NQY0 253 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 RPRMQ9NS64 109 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 SLC39A9Q9NUM3 307 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 CALYQ9NYX4 217 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 IDI2-AS1Q9NZ38 188 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 CLN8Q9UBY8 286 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 PRELID3BQ9Y3B1 194 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 PUS1Q9Y606 427 aaKnown RBP eCLIP2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 DOCK10Q96BY6 2186 aa2.74□□□□□ -1.97
HMGB3P11-201ENST00000440127 TRGV10A0A0A0MS01 117 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 IGLV9-49A0A0B4J1Y8 123 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 KBTBD11-OT1A0A1B0GTJ5 212 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 UBE2L5PA0A1B0GUS4 154 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 hADV38S2A0JD32 116 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 MEX3AA1L020 520 aaKnown RBP2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 DPRXA6NFQ7 191 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 NKX6-3A6NJ46 265 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 ZFP92A6NM28 416 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 ZNF729A6NN14 1252 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 C1orf196B1AJZ1 125 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 H3BQ15 152 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 CYB5BO43169 146 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 SOX15O60248 233 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 CYB5R3P00387 301 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 TSHBP01222 138 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 IFNA17P01571 189 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 MT-ND4LP03901 98 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 CD55P08174 381 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 OR4A8P0C604 315 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 OR9G9P0C7N8 305 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 FRMD6-AS1P0C7T7 363 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 BCL2P10415 239 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 NQO2P16083 231 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 FGF7P21781 194 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 PAX6P26367 422 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 TAGLN2P37802 199 aaKnown RBP2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 AKR1C3P42330 323 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 RAB13P51153 203 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 CEBPGP53567 150 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 SPCS3P61009 180 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 ERVK-16P61578 105 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 MRPS11P82912 194 aaKnown RBP2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 SRSF9Q13242 221 aaKnown RBP eCLIP2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 ACOT6Q3I5F7 207 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 RPL39P5Q59GN2 51 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 CT45A1Q5HYN5 189 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 FAM201AQ5SY85 155 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 PRAMEF5Q5TYX0 476 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 TEX36Q5VZQ5 186 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 STUMQ69YW2 141 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 LCN15Q6UWW0 184 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 RBMS3Q6XE24 437 aaKnown RBP2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 ASCL5Q7RTU5 278 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 SLC35E3Q7Z769 313 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 TRPT1Q86TN4 253 aaKnown RBP2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 ZNF709Q8N972 641 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 DEFB108BQ8NET1 73 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 OR10A7Q8NGE5 316 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 OR10G9Q8NGN4 311 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 OR10G7Q8NGN6 311 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 OR4S2Q8NH73 311 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 CT45A3Q8NHU0 189 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 LHX4Q969G2 390 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 HIST1H2BAQ96A08 127 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 ADTRPQ96IZ2 230 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 GAFA1Q96PS6 74 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 P2RX4Q99571 388 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 OPRPNQ99935 248 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 ZNF251Q9BRH9 671 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 NIPSNAP3BQ9BS92 247 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 GGACTQ9BVM4 153 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 ACTR3CQ9C0K3 210 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 IFI27L2Q9H2X8 130 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 SAV1Q9H4B6 383 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 VSIRQ9H7M9 311 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 YAE1D1Q9NRH1 226 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 GNG13Q9P2W3 67 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 VAX2Q9UIW0 290 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 TP53TG5Q9Y2B4 290 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 ZNF835Q9Y2P0 537 aa2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 LAMA2P24043 3122 aaKnown RBP2.73□□□□□ -1.97
HMGB3P11-201ENST00000440127 RANBP2P49792 3224 aaKnown RBP2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 CDH23Q9H251 3354 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 TNRC18O15417 2968 aaPredicted RBP2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 PPIAL4EA0A075B759 164 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 A0A087WWC5 75 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 TRAV38-1A0A0B4J264 116 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 TRGV8A0A0C4DH27 118 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 CTXND1A0A1B0GTU2 59 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 A0A1W2PPE3 182 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 NDUFAF8A1L188 74 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 MAP1LC3B2A6NCE7 125 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 B4DEV8 164 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 PPIAL4DF5H284 164 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 K7ENP7 123 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 CHEK1O14757 476 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms