RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 E5RGE8 158 aa14.32□□□□□ -0.12
HDAC6-208ENST00000438518 DEDDO75618 318 aa14.32□□□□□ -0.12
HDAC6-208ENST00000438518 RPLP1P05386 114 aaKnown RBP14.32□□□□□ -0.12
HDAC6-208ENST00000438518 CD28P10747 220 aa14.32□□□□□ -0.12
HDAC6-208ENST00000438518 SHISA2Q6UWI4 295 aa14.32□□□□□ -0.12
HDAC6-208ENST00000438518 ZNF491Q8N8L2 437 aa14.32□□□□□ -0.12
HDAC6-208ENST00000438518 KLK15Q9H2R5 256 aa14.32□□□□□ -0.12
HDAC6-208ENST00000438518 FBXL7Q9UJT9 491 aa14.32□□□□□ -0.12
HDAC6-208ENST00000438518 ATRQ13535 2644 aa14.31□□□□□ -0.12
HDAC6-208ENST00000438518 RPS10-NUDT3A0A1W2PQS6 291 aa14.31□□□□□ -0.12
HDAC6-208ENST00000438518 OR2J3O76001 311 aa14.31□□□□□ -0.12
HDAC6-208ENST00000438518 PRH1P02810 166 aa14.31□□□□□ -0.12
HDAC6-208ENST00000438518 OR8U8P0C7N1 319 aa14.31□□□□□ -0.12
HDAC6-208ENST00000438518 MFAP2P55001 183 aa14.31□□□□□ -0.12
HDAC6-208ENST00000438518 ATP5G2Q06055 141 aa14.31□□□□□ -0.12
HDAC6-208ENST00000438518 ETFRF1Q6IPR1 90 aa14.31□□□□□ -0.12
HDAC6-208ENST00000438518 CITED2Q99967 270 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-208ENST00000438518 DMRT1Q9Y5R6 373 aa14.31□□□□□ -0.12
HDAC6-208ENST00000438518 MPC2O95563 127 aa14.3□□□□□ -0.12
HDAC6-208ENST00000438518 PAX9P55771 341 aa14.3□□□□□ -0.12
HDAC6-208ENST00000438518 KRTAP10-3P60369 221 aa14.3□□□□□ -0.12
HDAC6-208ENST00000438518 KIAA0141Q14154 515 aaPredicted RBP14.3□□□□□ -0.12
HDAC6-208ENST00000438518 C15orf32Q32M92 178 aa14.3□□□□□ -0.12
HDAC6-208ENST00000438518 LRRC37A5PQ49AS3 106 aa14.3□□□□□ -0.12
HDAC6-208ENST00000438518 KHDC1LQ5JSQ8 128 aa14.3□□□□□ -0.12
HDAC6-208ENST00000438518 SPANXN5Q5MJ07 72 aa14.3□□□□□ -0.12
HDAC6-208ENST00000438518 PRSS54Q6PEW0 395 aa14.3□□□□□ -0.12
HDAC6-208ENST00000438518 C4orf3Q8WVX3 66 aa14.3□□□□□ -0.12
HDAC6-208ENST00000438518 EEF1AKMT3Q96AZ1 226 aa14.3□□□□□ -0.12
HDAC6-208ENST00000438518 MISP3Q96FF7 219 aa14.3□□□□□ -0.12
HDAC6-208ENST00000438518 C11orf1Q9H5F2 150 aa14.3□□□□□ -0.12
HDAC6-208ENST00000438518 LYRM2Q9NU23 88 aaPredicted RBP14.3□□□□□ -0.12
HDAC6-208ENST00000438518 GAR1Q9NY12 217 aaKnown RBP14.3□□□□□ -0.12
HDAC6-208ENST00000438518 TRBV7-1A0A0A6YYK4 115 aa14.29□□□□□ -0.12
HDAC6-208ENST00000438518 C15orf62A8K5M9 175 aa14.29□□□□□ -0.12
HDAC6-208ENST00000438518 IFNA4P05014 189 aa14.29□□□□□ -0.12
HDAC6-208ENST00000438518 RUNX1Q01196 453 aa14.29□□□□□ -0.12
HDAC6-208ENST00000438518 TMEM14EPQ6UXP3 125 aa14.29□□□□□ -0.12
HDAC6-208ENST00000438518 C19orf35Q6ZS72 473 aa14.29□□□□□ -0.12
HDAC6-208ENST00000438518 THAP6Q8TBB0 222 aa14.29□□□□□ -0.12
HDAC6-208ENST00000438518 I3L2K1 104 aa14.28□□□□□ -0.12
HDAC6-208ENST00000438518 NDUFB8O95169 186 aa14.28□□□□□ -0.12
HDAC6-208ENST00000438518 TMEM50AO95807 157 aa14.28□□□□□ -0.12
HDAC6-208ENST00000438518 LGALS1P09382 135 aaKnown RBP14.28□□□□□ -0.12
HDAC6-208ENST00000438518 SLC25A4P12235 298 aa14.28□□□□□ -0.12
HDAC6-208ENST00000438518 LYL1P12980 280 aa14.28□□□□□ -0.12
HDAC6-208ENST00000438518 FCGR2BP31994 310 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-208ENST00000438518 OPRK1P41145 380 aa14.28□□□□□ -0.12
HDAC6-208ENST00000438518 P2RY1P47900 373 aa14.28□□□□□ -0.12
HDAC6-208ENST00000438518 ZNF343Q6P1L6 599 aa14.28□□□□□ -0.12
HDAC6-208ENST00000438518 ETV3LQ6ZN32 361 aa14.28□□□□□ -0.12
HDAC6-208ENST00000438518 C11orf44Q8N8P7 122 aa14.28□□□□□ -0.12
HDAC6-208ENST00000438518 TMEM170AQ8WVE7 144 aa14.28□□□□□ -0.12
HDAC6-208ENST00000438518 CACNG8Q8WXS5 425 aa14.28□□□□□ -0.12
HDAC6-208ENST00000438518 MDFIQ99750 246 aa14.28□□□□□ -0.12
HDAC6-208ENST00000438518 TXN2Q99757 166 aa14.28□□□□□ -0.12
HDAC6-208ENST00000438518 H3BP45 60 aa14.27□□□□□ -0.13
HDAC6-208ENST00000438518 K7EIM0 57 aa14.27□□□□□ -0.13
HDAC6-208ENST00000438518 MT-CO2P00403 227 aa14.27□□□□□ -0.13
HDAC6-208ENST00000438518 GPX4P36969 197 aaPredicted RBP14.27□□□□□ -0.13
HDAC6-208ENST00000438518 BCAP31P51572 246 aa14.27□□□□□ -0.13
HDAC6-208ENST00000438518 CAV2P51636 162 aa14.27□□□□□ -0.13
HDAC6-208ENST00000438518 CD69Q07108 199 aa14.27□□□□□ -0.13
HDAC6-208ENST00000438518 C11orf87Q6NUJ2 197 aa14.27□□□□□ -0.13
HDAC6-208ENST00000438518 LCNL1Q6ZST4 164 aa14.27□□□□□ -0.13
HDAC6-208ENST00000438518 KLHL30-AS1Q8NEE0 82 aa14.27□□□□□ -0.13
HDAC6-208ENST00000438518 SCARB1Q8WTV0 552 aa14.27□□□□□ -0.13
HDAC6-208ENST00000438518 PINX1Q96BK5 328 aaKnown RBP14.27□□□□□ -0.13
HDAC6-208ENST00000438518 OR4C12Q96R67 309 aa14.27□□□□□ -0.13
HDAC6-208ENST00000438518 SLC25A31Q9H0C2 315 aa14.27□□□□□ -0.13
HDAC6-208ENST00000438518 C21orf62Q9NYP8 219 aa14.27□□□□□ -0.13
HDAC6-208ENST00000438518 SCGB2A1O75556 95 aa14.26□□□□□ -0.13
HDAC6-208ENST00000438518 STX12Q86Y82 276 aa14.26□□□□□ -0.13
HDAC6-208ENST00000438518 OR10P1Q8NGE3 313 aa14.26□□□□□ -0.13
HDAC6-208ENST00000438518 OR2T35Q8NGX2 323 aa14.26□□□□□ -0.13
HDAC6-208ENST00000438518 ZNF502Q8TBZ5 544 aa14.26□□□□□ -0.13
HDAC6-208ENST00000438518 WDR89Q96FK6 387 aaPredicted RBP14.26□□□□□ -0.13
HDAC6-208ENST00000438518 GNB4Q9HAV0 340 aa14.26□□□□□ -0.13
HDAC6-208ENST00000438518 OR5AC2Q9NZP5 309 aa14.26□□□□□ -0.13
HDAC6-208ENST00000438518 PAIP2BQ9ULR5 123 aaKnown RBP14.26□□□□□ -0.13
HDAC6-208ENST00000438518 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.25□□□□□ -0.13
HDAC6-208ENST00000438518 MFSD2BA6NFX1 497 aa14.25□□□□□ -0.13
HDAC6-208ENST00000438518 NUDT19A8MXV4 375 aa14.25□□□□□ -0.13
HDAC6-208ENST00000438518 H0YIZ8 118 aa14.25□□□□□ -0.13
HDAC6-208ENST00000438518 I3L521 148 aa14.25□□□□□ -0.13
HDAC6-208ENST00000438518 MFAP4P55083 255 aa14.25□□□□□ -0.13
HDAC6-208ENST00000438518 BAXQ07812 192 aa14.25□□□□□ -0.13
HDAC6-208ENST00000438518 TMEM252Q8N6L7 170 aa14.25□□□□□ -0.13
HDAC6-208ENST00000438518 RNF126Q9BV68 326 aa14.25□□□□□ -0.13
HDAC6-208ENST00000438518 GGACTQ9BVM4 153 aa14.25□□□□□ -0.13
HDAC6-208ENST00000438518 RANGRFQ9HD47 186 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-208ENST00000438518 MBD2Q9UBB5 411 aa14.25□□□□□ -0.13
HDAC6-208ENST00000438518 TRAV14DV4A0A0A6YYC5 116 aa14.24□□□□□ -0.13
HDAC6-208ENST00000438518 PMS2P5A8MQ11 134 aa14.24□□□□□ -0.13
HDAC6-208ENST00000438518 ADARB2-AS1A8MUL3 147 aa14.24□□□□□ -0.13
HDAC6-208ENST00000438518 PRSS46E5RG02 174 aa14.24□□□□□ -0.13
HDAC6-208ENST00000438518 FNDC10F2Z333 226 aa14.24□□□□□ -0.13
HDAC6-208ENST00000438518 NPBWR1P48145 328 aa14.24□□□□□ -0.13
HDAC6-208ENST00000438518 SULT1A1P50225 295 aa14.24□□□□□ -0.13
HDAC6-208ENST00000438518 HBG1P69891 147 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms