RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 PRCDQ00LT1 54 aa10.22□□□□□ -0.77
SEC13-211ENST00000431352 CADM3Q8N126 398 aa10.22□□□□□ -0.77
SEC13-211ENST00000431352 OR11H2Q8NH07 326 aa10.22□□□□□ -0.77
SEC13-211ENST00000431352 ST8SIA2Q92186 375 aa10.22□□□□□ -0.77
SEC13-211ENST00000431352 OR10C1Q96KK4 312 aa10.22□□□□□ -0.77
SEC13-211ENST00000431352 NXF2Q9GZY0 626 aaKnown RBP10.22□□□□□ -0.77
SEC13-211ENST00000431352 COMMD3Q9UBI1 195 aa10.22□□□□□ -0.77
SEC13-211ENST00000431352 M0QYG6 137 aa10.21□□□□□ -0.77
SEC13-211ENST00000431352 ST8SIA3O43173 380 aa10.21□□□□□ -0.77
SEC13-211ENST00000431352 RPL11P62913 178 aaKnown RBP10.21□□□□□ -0.77
SEC13-211ENST00000431352 LEMD1Q68G75 181 aa10.21□□□□□ -0.77
SEC13-211ENST00000431352 LPCAT3Q6P1A2 487 aa10.21□□□□□ -0.77
SEC13-211ENST00000431352 TOMM20LQ6UXN7 152 aa10.21□□□□□ -0.77
SEC13-211ENST00000431352 ZNF114Q8NC26 417 aa10.21□□□□□ -0.77
SEC13-211ENST00000431352 GPX8Q8TED1 209 aa10.21□□□□□ -0.77
SEC13-211ENST00000431352 GATAD1Q8WUU5 269 aa10.21□□□□□ -0.77
SEC13-211ENST00000431352 YIPF6Q96EC8 236 aa10.21□□□□□ -0.77
SEC13-211ENST00000431352 GINS3Q9BRX5 216 aa10.21□□□□□ -0.77
SEC13-211ENST00000431352 DNASE2O00115 360 aaPredicted RBP10.2□□□□□ -0.78
SEC13-211ENST00000431352 APOHP02749 345 aaPredicted RBP10.2□□□□□ -0.78
SEC13-211ENST00000431352 PGAM2P15259 253 aa10.2□□□□□ -0.78
SEC13-211ENST00000431352 RCVRNP35243 200 aa10.2□□□□□ -0.78
SEC13-211ENST00000431352 CMC4P56277 68 aaPredicted RBP10.2□□□□□ -0.78
SEC13-211ENST00000431352 HSPE1P61604 102 aaKnown RBP10.2□□□□□ -0.78
SEC13-211ENST00000431352 PAFAH1B2P68402 229 aa10.2□□□□□ -0.78
SEC13-211ENST00000431352 ERHP84090 104 aaKnown RBP10.2□□□□□ -0.78
SEC13-211ENST00000431352 RBMS2Q15434 407 aaKnown RBP10.2□□□□□ -0.78
SEC13-211ENST00000431352 FAM90A2PQ658T7 463 aa10.2□□□□□ -0.78
SEC13-211ENST00000431352 SLC35G3Q8N808 338 aa10.2□□□□□ -0.78
SEC13-211ENST00000431352 C11orf45Q8TAV5 145 aa10.2□□□□□ -0.78
SEC13-211ENST00000431352 TXN2Q99757 166 aa10.2□□□□□ -0.78
SEC13-211ENST00000431352 FRAS1Q86XX4 4008 aa10.19□□□□□ -0.78
SEC13-211ENST00000431352 SMIM31A0A1B0GVY4 71 aa10.19□□□□□ -0.78
SEC13-211ENST00000431352 DFFBO76075 338 aa10.19□□□□□ -0.78
SEC13-211ENST00000431352 IFNA4P05014 189 aa10.19□□□□□ -0.78
SEC13-211ENST00000431352 PI3P19957 117 aa10.19□□□□□ -0.78
SEC13-211ENST00000431352 AKR1C2P52895 323 aa10.19□□□□□ -0.78
SEC13-211ENST00000431352 DEFB131AP59861 70 aa10.19□□□□□ -0.78
SEC13-211ENST00000431352 NCS1P62166 190 aa10.19□□□□□ -0.78
SEC13-211ENST00000431352 LILRB2Q8N423 598 aa10.19□□□□□ -0.78
SEC13-211ENST00000431352 FAM24BQ8N5W8 94 aa10.19□□□□□ -0.78
SEC13-211ENST00000431352 DUSP18Q8NEJ0 188 aa10.19□□□□□ -0.78
SEC13-211ENST00000431352 MS4A6AQ9H2W1 248 aa10.19□□□□□ -0.78
SEC13-211ENST00000431352 SCPEP1Q9HB40 452 aa10.19□□□□□ -0.78
SEC13-211ENST00000431352 VCX3AQ9NNX9 186 aa10.19□□□□□ -0.78
SEC13-211ENST00000431352 FAM212BQ9NTI7 297 aaPredicted RBP10.19□□□□□ -0.78
SEC13-211ENST00000431352 RABAC1Q9UI14 185 aa10.19□□□□□ -0.78
SEC13-211ENST00000431352 PUS1Q9Y606 427 aaKnown RBP eCLIP10.19□□□□□ -0.78
SEC13-211ENST00000431352 SNCAP37840 140 aa10.18□□□□□ -0.78
SEC13-211ENST00000431352 NPBWR1P48145 328 aa10.18□□□□□ -0.78
SEC13-211ENST00000431352 HOXA1P49639 335 aaPredicted RBP10.18□□□□□ -0.78
SEC13-211ENST00000431352 LGALS9CQ6DKI2 356 aa10.18□□□□□ -0.78
SEC13-211ENST00000431352 ZNF600Q6ZNG1 722 aa10.18□□□□□ -0.78
SEC13-211ENST00000431352 MFFQ9GZY8 342 aa10.18□□□□□ -0.78
SEC13-211ENST00000431352 C11orf68Q9H3H3 251 aaKnown RBP10.18□□□□□ -0.78
SEC13-211ENST00000431352 ZFAND3Q9H8U3 227 aa10.18□□□□□ -0.78
SEC13-211ENST00000431352 KMT2AQ03164 3969 aa10.18□□□□□ -0.78
SEC13-211ENST00000431352 A0A1B0GU03 582 aa10.17□□□□□ -0.78
SEC13-211ENST00000431352 HPGDSO60760 199 aa10.17□□□□□ -0.78
SEC13-211ENST00000431352 IFNA17P01571 189 aa10.17□□□□□ -0.78
SEC13-211ENST00000431352 IGKV1-5P01602 117 aa10.17□□□□□ -0.78
SEC13-211ENST00000431352 APOA1P02647 267 aa10.17□□□□□ -0.78
SEC13-211ENST00000431352 ELK1P19419 428 aa10.17□□□□□ -0.78
SEC13-211ENST00000431352 PPP5CP53041 499 aa10.17□□□□□ -0.78
SEC13-211ENST00000431352 UCP3P55916 312 aa10.17□□□□□ -0.78
SEC13-211ENST00000431352 PIGPP57054 158 aa10.17□□□□□ -0.78
SEC13-211ENST00000431352 TMEM187Q14656 261 aa10.17□□□□□ -0.78
SEC13-211ENST00000431352 STXBP6Q8NFX7 210 aa10.17□□□□□ -0.78
SEC13-211ENST00000431352 PDCD10Q9BUL8 212 aa10.17□□□□□ -0.78
SEC13-211ENST00000431352 VSIRQ9H7M9 311 aa10.17□□□□□ -0.78
SEC13-211ENST00000431352 A0A087WXM4 84 aa10.16□□□□□ -0.78
SEC13-211ENST00000431352 FAM25AB3EWG3 89 aa10.16□□□□□ -0.78
SEC13-211ENST00000431352 FAM25CB3EWG5 89 aa10.16□□□□□ -0.78
SEC13-211ENST00000431352 FAM25GB3EWG6 89 aa10.16□□□□□ -0.78
SEC13-211ENST00000431352 ETV6P41212 452 aa10.16□□□□□ -0.78
SEC13-211ENST00000431352 VBP1P61758 197 aa10.16□□□□□ -0.78
SEC13-211ENST00000431352 TRIM16LQ309B1 348 aa10.16□□□□□ -0.78
SEC13-211ENST00000431352 STHQ8IWL8 128 aa10.16□□□□□ -0.78
SEC13-211ENST00000431352 RNASE11Q8TAA1 199 aaKnown RBP10.16□□□□□ -0.78
SEC13-211ENST00000431352 TP53RKQ96S44 253 aa10.16□□□□□ -0.78
SEC13-211ENST00000431352 TMEM231Q9H6L2 316 aa10.16□□□□□ -0.78
SEC13-211ENST00000431352 A0A0B4J293 547 aa10.15□□□□□ -0.78
SEC13-211ENST00000431352 CD5P06127 495 aa10.15□□□□□ -0.78
SEC13-211ENST00000431352 RNASE2P10153 161 aaKnown RBP10.15□□□□□ -0.78
SEC13-211ENST00000431352 OPRK1P41145 380 aa10.15□□□□□ -0.78
SEC13-211ENST00000431352 PRR20EP86478 221 aa10.15□□□□□ -0.78
SEC13-211ENST00000431352 PRR20CP86479 221 aa10.15□□□□□ -0.78
SEC13-211ENST00000431352 PRR20DP86480 221 aa10.15□□□□□ -0.78
SEC13-211ENST00000431352 PRR20BP86481 221 aa10.15□□□□□ -0.78
SEC13-211ENST00000431352 PRR20AP86496 221 aa10.15□□□□□ -0.78
SEC13-211ENST00000431352 SP6Q3SY56 376 aa10.15□□□□□ -0.78
SEC13-211ENST00000431352 RNASE10Q5GAN6 216 aaKnown RBP10.15□□□□□ -0.78
SEC13-211ENST00000431352 C2CD4CQ8TF44 421 aa10.15□□□□□ -0.78
SEC13-211ENST00000431352 ENY2Q9NPA8 101 aa10.15□□□□□ -0.78
SEC13-211ENST00000431352 MRPL36Q9P0J6 103 aaKnown RBP10.15□□□□□ -0.78
SEC13-211ENST00000431352 KNCNA6PVL3 124 aa10.14□□□□□ -0.79
SEC13-211ENST00000431352 TMEM50AO95807 157 aa10.14□□□□□ -0.79
SEC13-211ENST00000431352 ZNF688P0C7X2 276 aa10.14□□□□□ -0.79
SEC13-211ENST00000431352 NPPCP23582 126 aa10.14□□□□□ -0.79
SEC13-211ENST00000431352 RND3P61587 244 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms