RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 RAB2AP61019 212 aa6.9□□□□□ -1.3
HDAC1-202ENST00000428704 ERVK-16P61578 105 aa6.9□□□□□ -1.3
HDAC1-202ENST00000428704 DEFA5Q01523 94 aa6.9□□□□□ -1.3
HDAC1-202ENST00000428704 ZNF616Q08AN1 781 aa6.9□□□□□ -1.3
HDAC1-202ENST00000428704 SPANXN5Q5MJ07 72 aa6.9□□□□□ -1.3
HDAC1-202ENST00000428704 AKR1C8PQ5T2L2 129 aa6.9□□□□□ -1.3
HDAC1-202ENST00000428704 ATRAIDQ6UW56 229 aa6.9□□□□□ -1.3
HDAC1-202ENST00000428704 ZNF833PQ6ZTB9 187 aa6.9□□□□□ -1.3
HDAC1-202ENST00000428704 THNSL2Q86YJ6 484 aa6.9□□□□□ -1.3
HDAC1-202ENST00000428704 C11orf44Q8N8P7 122 aa6.9□□□□□ -1.3
HDAC1-202ENST00000428704 OR10P1Q8NGE3 313 aa6.9□□□□□ -1.3
HDAC1-202ENST00000428704 FAM213BQ8TBF2 198 aa6.9□□□□□ -1.3
HDAC1-202ENST00000428704 C17orf50Q8WW18 174 aa6.9□□□□□ -1.3
HDAC1-202ENST00000428704 RBMXL1Q96E39 390 aaKnown RBP6.9□□□□□ -1.3
HDAC1-202ENST00000428704 NARS2Q96I59 477 aaKnown RBP6.9□□□□□ -1.3
HDAC1-202ENST00000428704 OR4C12Q96R67 309 aa6.9□□□□□ -1.3
HDAC1-202ENST00000428704 TMEM147Q9BVK8 224 aa6.9□□□□□ -1.3
HDAC1-202ENST00000428704 GGACTQ9BVM4 153 aa6.9□□□□□ -1.3
HDAC1-202ENST00000428704 KIAA2026Q5HYC2 2103 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 SAA2-SAA4A0A096LPE2 208 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 WI2-2373I1.2A0A1W2PRP0 233 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 C9JQL5 133 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 H3BP45 60 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 H3BS24 57 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 HRASP01112 189 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 ARG1P05089 322 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 FBP1P09467 338 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 SFTA3P0C7M3 94 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 OR9G9P0C7N8 305 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 SAA2P0DJI9 122 aaPredicted RBP6.89□□□□□ -1.31
HDAC1-202ENST00000428704 PAX6P26367 422 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 VDAC2P45880 294 aaPredicted RBP6.89□□□□□ -1.31
HDAC1-202ENST00000428704 FHITP49789 147 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 ZNF137PP52743 207 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 LINC00205P59089 165 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 AKR1C1Q04828 323 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 SLC38A11Q08AI6 406 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 TMEM267Q0VDI3 215 aaPredicted RBP6.89□□□□□ -1.31
HDAC1-202ENST00000428704 LTC4SQ16873 150 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 RPL39P5Q59GN2 51 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 OR2B11Q5JQS5 317 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 ZNF383Q8NA42 475 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 OR10G4Q8NGN3 311 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 ZNF714Q96N38 554 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 ZNF257Q9Y2Q1 563 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 FAM96BQ9Y3D0 163 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 LYSTQ99698 3801 aa6.89□□□□□ -1.31
HDAC1-202ENST00000428704 DNAH7Q8WXX0 4024 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 TET2Q6N021 2002 aaPredicted RBP6.88□□□□□ -1.31
HDAC1-202ENST00000428704 RBFOX3A6NFN3 312 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 C15orf62A8K5M9 175 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 CEBPZOSA8MTT3 80 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 FNDC10F2Z333 226 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 MMP23AO75900 390 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 MBP02144 154 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 CT45A6P0DMU7 189 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 CT45A5P0DMU8 189 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 CT45A7P0DMV0 189 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 COX7A1P24310 79 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 HSPE1P61604 102 aaKnown RBP6.88□□□□□ -1.31
HDAC1-202ENST00000428704 RUNX1Q01196 453 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 GUCA2BQ16661 112 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 KHDC3LQ587J8 217 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 ZNF506Q5JVG8 444 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 LDLRAD2Q5SZI1 272 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 PRAMEF5Q5TYX0 476 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 SLC25A24Q6NUK1 477 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 LYG1Q8N1E2 194 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 DYNAPQ8N1N2 210 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 LILRB2Q8N423 598 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 BEND2Q8NDZ0 799 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 OR5AN1Q8NGI8 311 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 OR4A16Q8NH70 328 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 MUC7Q8TAX7 377 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 QTRT1Q9BXR0 403 aaKnown RBP6.88□□□□□ -1.31
HDAC1-202ENST00000428704 SLC35B3Q9H1N7 401 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 TMEM231Q9H6L2 316 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 TUBA4BQ9H853 241 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 RPRMQ9NS64 109 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 TMEM14BQ9NUH8 114 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 TMEM140Q9NV12 185 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 VPREB3Q9UKI3 123 aa6.88□□□□□ -1.31
HDAC1-202ENST00000428704 FOXA2Q9Y261 457 aaPredicted RBP6.88□□□□□ -1.31
HDAC1-202ENST00000428704 C15orf61A6NNL5 157 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 ODF3BA8MYP8 253 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 INS-IGF2F8WCM5 200 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 AGPAT2O15120 278 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 MPDU1O75352 247 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 TSPAN9O75954 239 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 RBP4P02753 201 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 HSPB1P04792 205 aaKnown RBP6.87□□□□□ -1.31
HDAC1-202ENST00000428704 NHLRC4P0CG21 123 aaPredicted RBP6.87□□□□□ -1.31
HDAC1-202ENST00000428704 IGLL1P15814 213 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 ATF4P18848 351 aaPredicted RBP6.87□□□□□ -1.31
HDAC1-202ENST00000428704 NFYBP25208 207 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 TAGLN2P37802 199 aaKnown RBP6.87□□□□□ -1.31
HDAC1-202ENST00000428704 DLK1P80370 383 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 RTL8BQ17RB0 113 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 NSUN5P1Q3KNT7 163 aa6.87□□□□□ -1.31
HDAC1-202ENST00000428704 TMEM41BQ5BJD5 291 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms