RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 ADMP35318 185 aa12.63□□□□□ -0.39
VRK2-204ENST00000428021 SPCS3P61009 180 aa12.63□□□□□ -0.39
VRK2-204ENST00000428021 DEFB114Q30KQ6 69 aa12.63□□□□□ -0.39
VRK2-204ENST00000428021 TMEM128Q5BJH2 165 aa12.63□□□□□ -0.39
VRK2-204ENST00000428021 LYZL2Q7Z4W2 148 aa12.63□□□□□ -0.39
VRK2-204ENST00000428021 TMED4Q7Z7H5 227 aa12.63□□□□□ -0.39
VRK2-204ENST00000428021 OR52E5Q8NH55 327 aa12.63□□□□□ -0.39
VRK2-204ENST00000428021 CACNG8Q8WXS5 425 aa12.63□□□□□ -0.39
VRK2-204ENST00000428021 BSCL2Q96G97 398 aaPredicted RBP12.63□□□□□ -0.39
VRK2-204ENST00000428021 PDCD10Q9BUL8 212 aa12.63□□□□□ -0.39
VRK2-204ENST00000428021 SMAD5-AS1Q9Y6J3 95 aa12.63□□□□□ -0.39
VRK2-204ENST00000428021 A0A0B4J2A0 478 aa12.62□□□□□ -0.39
VRK2-204ENST00000428021 MT-CO2P00403 227 aa12.62□□□□□ -0.39
VRK2-204ENST00000428021 IGHV3-48P01763 117 aa12.62□□□□□ -0.39
VRK2-204ENST00000428021 CTSGP08311 255 aa12.62□□□□□ -0.39
VRK2-204ENST00000428021 CBLN1P23435 193 aa12.62□□□□□ -0.39
VRK2-204ENST00000428021 FCGR2BP31994 310 aaPredicted RBP12.62□□□□□ -0.39
VRK2-204ENST00000428021 CCR6P51684 374 aa12.62□□□□□ -0.39
VRK2-204ENST00000428021 CD69Q07108 199 aa12.62□□□□□ -0.39
VRK2-204ENST00000428021 BSXQ3C1V8 233 aa12.62□□□□□ -0.39
VRK2-204ENST00000428021 CD300EQ496F6 205 aaPredicted RBP12.62□□□□□ -0.39
VRK2-204ENST00000428021 TM4SF20Q53R12 229 aa12.62□□□□□ -0.39
VRK2-204ENST00000428021 NMSQ5H8A3 153 aa12.62□□□□□ -0.39
VRK2-204ENST00000428021 TRIQKQ629K1 86 aa12.62□□□□□ -0.39
VRK2-204ENST00000428021 SPSB3Q6PJ21 355 aa12.62□□□□□ -0.39
VRK2-204ENST00000428021 SHPKQ9UHJ6 478 aa12.62□□□□□ -0.39
VRK2-204ENST00000428021 A6NHS1 94 aa12.61□□□□□ -0.39
VRK2-204ENST00000428021 C8orf88P0DMB2 117 aa12.61□□□□□ -0.39
VRK2-204ENST00000428021 IL7P13232 177 aa12.61□□□□□ -0.39
VRK2-204ENST00000428021 SNCAP37840 140 aa12.61□□□□□ -0.39
VRK2-204ENST00000428021 HOXA1P49639 335 aaPredicted RBP12.61□□□□□ -0.39
VRK2-204ENST00000428021 Q56UQ5 140 aa12.61□□□□□ -0.39
VRK2-204ENST00000428021 LCN12Q6JVE5 192 aa12.61□□□□□ -0.39
VRK2-204ENST00000428021 LGI3Q8N145 548 aa12.61□□□□□ -0.39
VRK2-204ENST00000428021 UBAC2Q8NBM4 344 aa12.61□□□□□ -0.39
VRK2-204ENST00000428021 OR2K2Q8NGT1 345 aa12.61□□□□□ -0.39
VRK2-204ENST00000428021 PINX1Q96BK5 328 aaKnown RBP12.61□□□□□ -0.39
VRK2-204ENST00000428021 LINC00854A0A1B0GVQ3 168 aa12.6□□□□□ -0.39
VRK2-204ENST00000428021 NAP1L6A6NFF2 107 aa12.6□□□□□ -0.39
VRK2-204ENST00000428021 ZNF785A8K8V0 405 aa12.6□□□□□ -0.39
VRK2-204ENST00000428021 SULT1A3P0DMM9 295 aa12.6□□□□□ -0.39
VRK2-204ENST00000428021 SULT1A4P0DMN0 295 aa12.6□□□□□ -0.39
VRK2-204ENST00000428021 ANXA3P12429 323 aa12.6□□□□□ -0.39
VRK2-204ENST00000428021 BTCP35070 178 aa12.6□□□□□ -0.39
VRK2-204ENST00000428021 INPP1P49441 399 aa12.6□□□□□ -0.39
VRK2-204ENST00000428021 MFAP4P55083 255 aa12.6□□□□□ -0.39
VRK2-204ENST00000428021 SRPXP78539 464 aa12.6□□□□□ -0.39
VRK2-204ENST00000428021 PPP1R1AQ13522 171 aa12.6□□□□□ -0.39
VRK2-204ENST00000428021 RBMS2Q15434 407 aaKnown RBP12.6□□□□□ -0.39
VRK2-204ENST00000428021 ANKRD55Q3KP44 614 aa12.6□□□□□ -0.39
VRK2-204ENST00000428021 UXS1Q8NBZ7 420 aa12.6□□□□□ -0.39
VRK2-204ENST00000428021 DYNLRB2Q8TF09 96 aa12.6□□□□□ -0.39
VRK2-204ENST00000428021 TMEM190Q8WZ59 177 aa12.6□□□□□ -0.39
VRK2-204ENST00000428021 TXN2Q99757 166 aa12.6□□□□□ -0.39
VRK2-204ENST00000428021 ENY2Q9NPA8 101 aa12.6□□□□□ -0.39
VRK2-204ENST00000428021 TECRQ9NZ01 308 aaKnown RBP12.6□□□□□ -0.39
VRK2-204ENST00000428021 MLXQ9UH92 298 aa12.6□□□□□ -0.39
VRK2-204ENST00000428021 SELENOKQ9Y6D0 94 aa12.6□□□□□ -0.39
VRK2-204ENST00000428021 NDUFB6O95139 128 aa12.59□□□□□ -0.39
VRK2-204ENST00000428021 SUB1P53999 127 aaKnown RBP eCLIP12.59□□□□□ -0.39
VRK2-204ENST00000428021 ELLP55199 621 aaPredicted RBP12.59□□□□□ -0.39
VRK2-204ENST00000428021 C11orf87Q6NUJ2 197 aa12.59□□□□□ -0.39
VRK2-204ENST00000428021 CENPSQ8N2Z9 138 aa12.59□□□□□ -0.39
VRK2-204ENST00000428021 LRTM2Q8N967 370 aa12.59□□□□□ -0.39
VRK2-204ENST00000428021 FNDC4Q9H6D8 234 aaPredicted RBP12.59□□□□□ -0.39
VRK2-204ENST00000428021 PALMDQ9NP74 551 aa12.59□□□□□ -0.39
VRK2-204ENST00000428021 UFC1Q9Y3C8 167 aa12.59□□□□□ -0.39
VRK2-204ENST00000428021 NDUFA4O00483 81 aa12.58□□□□□ -0.4
VRK2-204ENST00000428021 NXPH3O95157 252 aa12.58□□□□□ -0.4
VRK2-204ENST00000428021 SFT2D2O95562 160 aa12.58□□□□□ -0.4
VRK2-204ENST00000428021 VAMP1P23763 118 aa12.58□□□□□ -0.4
VRK2-204ENST00000428021 SMCO1Q147U7 214 aa12.58□□□□□ -0.4
VRK2-204ENST00000428021 MLANAQ16655 118 aa12.58□□□□□ -0.4
VRK2-204ENST00000428021 TMEM170AQ8WVE7 144 aa12.58□□□□□ -0.4
VRK2-204ENST00000428021 GAR1Q9NY12 217 aaKnown RBP12.58□□□□□ -0.4
VRK2-204ENST00000428021 MRPL36Q9P0J6 103 aaKnown RBP12.58□□□□□ -0.4
VRK2-204ENST00000428021 FLVCR2Q9UPI3 526 aa12.58□□□□□ -0.4
VRK2-204ENST00000428021 HUWE1Q7Z6Z7 4374 aaKnown RBP12.58□□□□□ -0.4
VRK2-204ENST00000428021 DUXBA0A1W2PPF3 345 aa12.57□□□□□ -0.4
VRK2-204ENST00000428021 CEBPZOSA8MTT3 80 aa12.57□□□□□ -0.4
VRK2-204ENST00000428021 PLA2G10O15496 165 aa12.57□□□□□ -0.4
VRK2-204ENST00000428021 HTR2BP41595 481 aa12.57□□□□□ -0.4
VRK2-204ENST00000428021 TNFRSF9Q07011 255 aa12.57□□□□□ -0.4
VRK2-204ENST00000428021 CNPY1Q3B7I2 92 aa12.57□□□□□ -0.4
VRK2-204ENST00000428021 MARC2Q969Z3 335 aa12.57□□□□□ -0.4
VRK2-204ENST00000428021 WDR89Q96FK6 387 aaPredicted RBP12.57□□□□□ -0.4
VRK2-204ENST00000428021 ASCL2Q99929 193 aa12.57□□□□□ -0.4
VRK2-204ENST00000428021 C7orf50Q9BRJ6 194 aaKnown RBP12.57□□□□□ -0.4
VRK2-204ENST00000428021 HEYLQ9NQ87 328 aaPredicted RBP12.57□□□□□ -0.4
VRK2-204ENST00000428021 C19orf73Q9NVV2 129 aa12.57□□□□□ -0.4
VRK2-204ENST00000428021 MRPL27Q9P0M9 148 aaKnown RBP12.57□□□□□ -0.4
VRK2-204ENST00000428021 HSPB7Q9UBY9 170 aa12.57□□□□□ -0.4
VRK2-204ENST00000428021 IGHV3OR16-8A0A075B7F1 116 aa12.56□□□□□ -0.4
VRK2-204ENST00000428021 A0A1B0GU03 582 aa12.56□□□□□ -0.4
VRK2-204ENST00000428021 CORTO00230 105 aa12.56□□□□□ -0.4
VRK2-204ENST00000428021 NUPL2O15504 423 aaKnown RBP12.56□□□□□ -0.4
VRK2-204ENST00000428021 PITX3O75364 302 aa12.56□□□□□ -0.4
VRK2-204ENST00000428021 FRMD6-AS1P0C7T7 363 aa12.56□□□□□ -0.4
VRK2-204ENST00000428021 NHLRC4P0CG21 123 aaPredicted RBP12.56□□□□□ -0.4
VRK2-204ENST00000428021 IGHV4-30-4P0DP06 118 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms