RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 PDCD10Q9BUL8 212 aa6.95□□□□□ -1.3
SMC1A-203ENST00000428014 WDR12Q9GZL7 423 aaKnown RBP6.95□□□□□ -1.3
SMC1A-203ENST00000428014 PLEKHA3Q9HB20 300 aa6.95□□□□□ -1.3
SMC1A-203ENST00000428014 C21orf62Q9NYP8 219 aa6.95□□□□□ -1.3
SMC1A-203ENST00000428014 UFC1Q9Y3C8 167 aa6.95□□□□□ -1.3
SMC1A-203ENST00000428014 C15orf62A8K5M9 175 aa6.94□□□□□ -1.3
SMC1A-203ENST00000428014 FAM90A26D6RGX4 464 aa6.94□□□□□ -1.3
SMC1A-203ENST00000428014 TGOLN2O43493 480 aa6.94□□□□□ -1.3
SMC1A-203ENST00000428014 SCGB2A1O75556 95 aa6.94□□□□□ -1.3
SMC1A-203ENST00000428014 CLEC3BP05452 202 aa6.94□□□□□ -1.3
SMC1A-203ENST00000428014 NPBWR1P48145 328 aa6.94□□□□□ -1.3
SMC1A-203ENST00000428014 PPP5CP53041 499 aa6.94□□□□□ -1.3
SMC1A-203ENST00000428014 RELQ04864 619 aaPredicted RBP6.94□□□□□ -1.3
SMC1A-203ENST00000428014 RBMS2Q15434 407 aaKnown RBP6.94□□□□□ -1.3
SMC1A-203ENST00000428014 TRIM16LQ309B1 348 aa6.94□□□□□ -1.3
SMC1A-203ENST00000428014 ANKRD55Q3KP44 614 aa6.94□□□□□ -1.3
SMC1A-203ENST00000428014 OR10W1Q8NGF6 305 aa6.94□□□□□ -1.3
SMC1A-203ENST00000428014 SCARB1Q8WTV0 552 aa6.94□□□□□ -1.3
SMC1A-203ENST00000428014 TMEM190Q8WZ59 177 aa6.94□□□□□ -1.3
SMC1A-203ENST00000428014 OR10C1Q96KK4 312 aa6.94□□□□□ -1.3
SMC1A-203ENST00000428014 SRRQ9GZT4 340 aa6.94□□□□□ -1.3
SMC1A-203ENST00000428014 DAZ1Q9NQZ3 744 aaKnown RBP6.94□□□□□ -1.3
SMC1A-203ENST00000428014 A0A1B0GU03 582 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 TMEM213A2RRL7 107 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 ANKRD34BA5PLL1 514 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 MFSD2BA6NFX1 497 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 C2orf70A6NJV1 201 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 I3L2K1 104 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 TRBV12-3P01733 135 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 PRH1P02810 166 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 OR5AC1P0C628 307 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 APELAP0DMC3 54 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 SPNP16150 400 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 CBLN1P23435 193 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 SNCAP37840 140 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 HTR2BP41595 481 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 CCR6P51684 374 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 MFAP4P55083 255 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 TMEM187Q14656 261 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 DEFB114Q30KQ6 69 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 C2orf83Q53S99 150 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 NMSQ5H8A3 153 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 SLC25A24Q6NUK1 477 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 PLET1Q6UQ28 207 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 LGI3Q8N145 548 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 RNASEH2CQ8TDP1 164 aaKnown RBP6.93□□□□□ -1.3
SMC1A-203ENST00000428014 WDR89Q96FK6 387 aaPredicted RBP6.93□□□□□ -1.3
SMC1A-203ENST00000428014 C19orf73Q9NVV2 129 aa6.93□□□□□ -1.3
SMC1A-203ENST00000428014 TRAV30A0A087WSZ9 112 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 DBX1A6NMT0 343 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 CENPXA8MT69 81 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 NUPL2O15504 423 aaKnown RBP6.92□□□□□ -1.3
SMC1A-203ENST00000428014 ST8SIA3O43173 380 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 CTSGP08311 255 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 SLC25A4P12235 298 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 FOLR2P14207 255 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 PI3P19957 117 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 BMI1P35226 326 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 MFAP2P55001 183 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 SUPT4H1P63272 117 aaKnown RBP6.92□□□□□ -1.3
SMC1A-203ENST00000428014 CD69Q07108 199 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 ZNF846Q147U1 533 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 PYDC2Q56P42 97 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 CLEC19AQ6UXS0 136 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 GTSCR1Q86UQ5 136 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 SELENOHQ8IZQ5 122 aaKnown RBP6.92□□□□□ -1.3
SMC1A-203ENST00000428014 Q8N1Y9 231 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 SLC35G3Q8N808 338 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 OR4X1Q8NH49 305 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 TMEM230Q96A57 120 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 SPAG8Q99932 426 aaPredicted RBP6.92□□□□□ -1.3
SMC1A-203ENST00000428014 HSPB7Q9UBY9 170 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 TMED3Q9Y3Q3 217 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 U3KQ87 197 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 COL7A1Q02388 2944 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 TENM3Q9P273 2699 aa6.92□□□□□ -1.3
SMC1A-203ENST00000428014 TRAV2A0A0B4J234 112 aa6.91□□□□□ -1.3
SMC1A-203ENST00000428014 RPS10-NUDT3A0A1W2PQS6 291 aa6.91□□□□□ -1.3
SMC1A-203ENST00000428014 OR2C1O95371 312 aa6.91□□□□□ -1.3
SMC1A-203ENST00000428014 IFNA17P01571 189 aa6.91□□□□□ -1.3
SMC1A-203ENST00000428014 PRB2P02812 416 aaPredicted RBP6.91□□□□□ -1.3
SMC1A-203ENST00000428014 SULT1A3P0DMM9 295 aa6.91□□□□□ -1.3
SMC1A-203ENST00000428014 SULT1A4P0DMN0 295 aa6.91□□□□□ -1.3
SMC1A-203ENST00000428014 CMC4P56277 68 aaPredicted RBP6.91□□□□□ -1.3
SMC1A-203ENST00000428014 RNASE12Q5GAN4 147 aaKnown RBP6.91□□□□□ -1.3
SMC1A-203ENST00000428014 DEFB121Q5J5C9 76 aa6.91□□□□□ -1.3
SMC1A-203ENST00000428014 TMEM268Q5VZI3 342 aa6.91□□□□□ -1.3
SMC1A-203ENST00000428014 ETFRF1Q6IPR1 90 aa6.91□□□□□ -1.3
SMC1A-203ENST00000428014 ADAMTSL5Q6ZMM2 481 aa6.91□□□□□ -1.3
SMC1A-203ENST00000428014 TMEM116Q8NCL8 245 aa6.91□□□□□ -1.3
SMC1A-203ENST00000428014 DUSP18Q8NEJ0 188 aa6.91□□□□□ -1.3
SMC1A-203ENST00000428014 LHFPL5Q8TAF8 219 aa6.91□□□□□ -1.3
SMC1A-203ENST00000428014 CCDC32Q9BV29 185 aa6.91□□□□□ -1.3
SMC1A-203ENST00000428014 SSBP4Q9BWG4 385 aaPredicted RBP6.91□□□□□ -1.3
SMC1A-203ENST00000428014 ENY2Q9NPA8 101 aa6.91□□□□□ -1.3
SMC1A-203ENST00000428014 MCUBQ9NWR8 336 aa6.91□□□□□ -1.3
SMC1A-203ENST00000428014 NSG2Q9Y328 171 aa6.91□□□□□ -1.3
SMC1A-203ENST00000428014 TSPAN4O14817 238 aa6.9□□□□□ -1.3
SMC1A-203ENST00000428014 PITX3O75364 302 aa6.9□□□□□ -1.3
SMC1A-203ENST00000428014 NDUFB6O95139 128 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms