RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 M0QZ24 198 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 PITX3O75364 302 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 OR2A4O95047 310 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 IGKV1-5P01602 117 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 GAPDHP04406 335 aaKnown RBP4.24□□□□□ -1.73
C9orf3-205ENST00000427193 RLN1P04808 185 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 ARG1P05089 322 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 OR5AC1P0C628 307 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 TRAPPC2P0DI81 140 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 TRAPPC2BP0DI82 140 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 SULT1A3P0DMM9 295 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 SULT1A4P0DMN0 295 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 RPA2P15927 270 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 AZU1P20160 251 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 CD1BP29016 333 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 MC5RP33032 325 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 GNG10P50151 68 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 KIAA1644Q3SXP7 199 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 PHLDA2Q53GA4 152 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 DHRS7BQ6IAN0 325 aaPredicted RBP4.24□□□□□ -1.73
C9orf3-205ENST00000427193 PDPNQ86YL7 162 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 TGIF2LXQ8IUE1 241 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 SELENOHQ8IZQ5 122 aaKnown RBP4.24□□□□□ -1.73
C9orf3-205ENST00000427193 PUSL1Q8N0Z8 303 aaKnown RBP4.24□□□□□ -1.73
C9orf3-205ENST00000427193 CCDC71LQ8N9Z2 235 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 NPBQ8NG41 125 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 OR10X1Q8NGY0 326 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 CD300LFQ8TDQ1 290 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 LHX4Q969G2 390 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 OR2A7Q96R45 310 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 S1PR3Q99500 378 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 RNF5Q99942 180 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 SEC22CQ9BRL7 303 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 CACNG5Q9UF02 275 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 NUP50Q9UKX7 468 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 AMMECR1Q9Y4X0 333 aaPredicted RBP4.24□□□□□ -1.73
C9orf3-205ENST00000427193 SOX21Q9Y651 276 aaPredicted RBP4.24□□□□□ -1.73
C9orf3-205ENST00000427193 ALG5Q9Y673 324 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 A0A0U1RQK1 487 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 DUXBA0A1W2PPF3 345 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 H7C423 109 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 M0R1X1 148 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 TOR1AO14656 332 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 PLXNB1O43157 2135 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 TNFSF12O43508 249 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 NDUFA3O95167 84 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 DHFRP00374 187 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 HPRT1P00492 218 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 HLA-AP01891 365 aaKnown RBP4.23□□□□□ -1.73
C9orf3-205ENST00000427193 SLC25A6P12236 298 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 PGAM2P15259 253 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 AKR1C4P17516 323 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 CXCL3P19876 107 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 IL3RAP26951 378 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 CEACAM3P40198 252 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 KIR2DS2P43631 304 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 ARHGDIBP52566 201 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 H2BFSP57053 126 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 RAB25P57735 213 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 SRPXP78539 464 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 SSX2Q16385 188 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 SP6Q3SY56 376 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 GPR157Q5UAW9 335 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 BRD3OSQ6XYD6 125 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 TMED4Q7Z7H5 227 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 SGPP2Q8IWX5 399 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 FAM71E2Q8N5Q1 922 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 TEX29Q8N6K0 151 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 OR11H7Q8NGC8 314 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 OR52B4Q8NGK2 314 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 RBPMSQ93062 196 aaKnown RBP4.23□□□□□ -1.73
C9orf3-205ENST00000427193 LSM10Q969L4 123 aaKnown RBP4.23□□□□□ -1.73
C9orf3-205ENST00000427193 RBMXL1Q96E39 390 aaKnown RBP4.23□□□□□ -1.73
C9orf3-205ENST00000427193 OR51J1Q9H342 316 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 RAB18Q9NP72 206 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 COA4Q9NYJ1 87 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 COMMD9Q9P000 198 aa4.23□□□□□ -1.73
C9orf3-205ENST00000427193 C14orf166Q9Y224 244 aaKnown RBP4.23□□□□□ -1.73
C9orf3-205ENST00000427193 DYNC2H1Q8NCM8 4307 aaKnown RBP4.22□□□□□ -1.73
C9orf3-205ENST00000427193 A6NDX4 124 aa4.22□□□□□ -1.73
C9orf3-205ENST00000427193 MPTX1A8MV57 137 aa4.22□□□□□ -1.73
C9orf3-205ENST00000427193 INS-IGF2F8WCM5 200 aa4.22□□□□□ -1.73
C9orf3-205ENST00000427193 CLDN34H7C241 214 aa4.22□□□□□ -1.73
C9orf3-205ENST00000427193 CREBL2O60519 120 aaPredicted RBP4.22□□□□□ -1.73
C9orf3-205ENST00000427193 FCGR3BO75015 233 aa4.22□□□□□ -1.73
C9orf3-205ENST00000427193 S1PR2O95136 353 aa4.22□□□□□ -1.73
C9orf3-205ENST00000427193 RRASP10301 218 aa4.22□□□□□ -1.73
C9orf3-205ENST00000427193 VDAC1P21796 283 aa4.22□□□□□ -1.73
C9orf3-205ENST00000427193 PAX6P26367 422 aa4.22□□□□□ -1.73
C9orf3-205ENST00000427193 LPAR6P43657 344 aa4.22□□□□□ -1.73
C9orf3-205ENST00000427193 IER3P46695 156 aa4.22□□□□□ -1.73
C9orf3-205ENST00000427193 LGALS7P47929 136 aa4.22□□□□□ -1.73
C9orf3-205ENST00000427193 REG1BP48304 166 aa4.22□□□□□ -1.73
C9orf3-205ENST00000427193 RAB13P51153 203 aa4.22□□□□□ -1.73
C9orf3-205ENST00000427193 UBE2KP61086 200 aa4.22□□□□□ -1.73
C9orf3-205ENST00000427193 RRAS2P62070 204 aaPredicted RBP4.22□□□□□ -1.73
C9orf3-205ENST00000427193 CATR1Q13166 79 aa4.22□□□□□ -1.73
C9orf3-205ENST00000427193 KLK9Q2XQG4 91 aa4.22□□□□□ -1.73
C9orf3-205ENST00000427193 DEFB112Q30KQ8 113 aa4.22□□□□□ -1.73
C9orf3-205ENST00000427193 ABCA11PQ4W5N1 156 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms