RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 LFNGQ8NES3 379 aa11.95□□□□□ -0.5
GINS3-203ENST00000426538 MISP3Q96FF7 219 aa11.95□□□□□ -0.5
GINS3-203ENST00000426538 HSPB9Q9BQS6 159 aa11.95□□□□□ -0.5
GINS3-203ENST00000426538 RSG1Q9BU20 258 aa11.95□□□□□ -0.5
GINS3-203ENST00000426538 PARP11Q9NR21 331 aa11.95□□□□□ -0.5
GINS3-203ENST00000426538 AKAP9Q99996 3911 aa11.95□□□□□ -0.5
GINS3-203ENST00000426538 C17orf112F2Z3M2 114 aa11.94□□□□□ -0.5
GINS3-203ENST00000426538 TSPAN9O75954 239 aa11.94□□□□□ -0.5
GINS3-203ENST00000426538 PRH1P02810 166 aa11.94□□□□□ -0.5
GINS3-203ENST00000426538 HNF1AP20823 631 aa11.94□□□□□ -0.5
GINS3-203ENST00000426538 SULT1A2P50226 295 aa11.94□□□□□ -0.5
GINS3-203ENST00000426538 RAB5CP51148 216 aa11.94□□□□□ -0.5
GINS3-203ENST00000426538 RAB31Q13636 194 aa11.94□□□□□ -0.5
GINS3-203ENST00000426538 TEPPQ6URK8 271 aa11.94□□□□□ -0.5
GINS3-203ENST00000426538 IL17RELQ6ZVW7 336 aa11.94□□□□□ -0.5
GINS3-203ENST00000426538 SGMS2Q8NHU3 365 aa11.94□□□□□ -0.5
GINS3-203ENST00000426538 SLC35E1Q96K37 410 aa11.94□□□□□ -0.5
GINS3-203ENST00000426538 PSMG3Q9BT73 122 aaPredicted RBP11.94□□□□□ -0.5
GINS3-203ENST00000426538 TMUB1Q9BVT8 246 aa11.94□□□□□ -0.5
GINS3-203ENST00000426538 WDR83OSQ9Y284 106 aa11.94□□□□□ -0.5
GINS3-203ENST00000426538 SH2D7A6NKC9 451 aaPredicted RBP11.94□□□□□ -0.5
GINS3-203ENST00000426538 NPIPB5A8MRT5 1133 aa11.94□□□□□ -0.5
GINS3-203ENST00000426538 ZNF705EA8MWA4 302 aaPredicted RBP11.94□□□□□ -0.5
GINS3-203ENST00000426538 UMAD1C9J7I0 102 aa11.94□□□□□ -0.5
GINS3-203ENST00000426538 FAM157CP0CG43 387 aa11.94□□□□□ -0.5
GINS3-203ENST00000426538 SERF2P84101 59 aa11.94□□□□□ -0.5
GINS3-203ENST00000426538 KRTAP1-1Q07627 177 aa11.94□□□□□ -0.5
GINS3-203ENST00000426538 MLANAQ16655 118 aa11.94□□□□□ -0.5
GINS3-203ENST00000426538 TMEM182Q6ZP80 229 aaPredicted RBP11.94□□□□□ -0.5
GINS3-203ENST00000426538 TTC9CQ8N5M4 171 aa11.94□□□□□ -0.5
GINS3-203ENST00000426538 TMEM68Q96MH6 324 aa11.94□□□□□ -0.5
GINS3-203ENST00000426538 FBXO7Q9Y3I1 522 aa11.94□□□□□ -0.5
GINS3-203ENST00000426538 TIMM9Q9Y5J7 89 aa11.94□□□□□ -0.5
GINS3-203ENST00000426538 RPS10-NUDT3A0A1W2PQS6 291 aa11.93□□□□□ -0.5
GINS3-203ENST00000426538 ATP6V0E1O15342 81 aa11.93□□□□□ -0.5
GINS3-203ENST00000426538 AMY1AP04745 511 aa11.93□□□□□ -0.5
GINS3-203ENST00000426538 CRYGCP07315 174 aa11.93□□□□□ -0.5
GINS3-203ENST00000426538 NMBP08949 121 aa11.93□□□□□ -0.5
GINS3-203ENST00000426538 EGR2P11161 476 aaPredicted RBP11.93□□□□□ -0.5
GINS3-203ENST00000426538 MDKP21741 143 aaPredicted RBP11.93□□□□□ -0.5
GINS3-203ENST00000426538 GAMTQ14353 236 aa11.93□□□□□ -0.5
GINS3-203ENST00000426538 AKR1C8PQ5T2L2 129 aa11.93□□□□□ -0.5
GINS3-203ENST00000426538 PVRIGQ6DKI7 326 aa11.93□□□□□ -0.5
GINS3-203ENST00000426538 UNQ5815/PRO19632Q6UWF5 114 aa11.93□□□□□ -0.5
GINS3-203ENST00000426538 C19orf35Q6ZS72 473 aa11.93□□□□□ -0.5
GINS3-203ENST00000426538 SLC16A13Q7RTY0 426 aa11.93□□□□□ -0.5
GINS3-203ENST00000426538 NPCDR1Q9BY65 106 aa11.93□□□□□ -0.5
GINS3-203ENST00000426538 TNFRSF19Q9NS68 423 aa11.93□□□□□ -0.5
GINS3-203ENST00000426538 RFNGQ9Y644 331 aa11.93□□□□□ -0.5
GINS3-203ENST00000426538 NOTCH2Q04721 2471 aa11.93□□□□□ -0.5
GINS3-203ENST00000426538 NAV3Q8IVL0 2385 aa11.93□□□□□ -0.5
GINS3-203ENST00000426538 TRIM77I1YAP6 450 aa11.92□□□□□ -0.5
GINS3-203ENST00000426538 MFAP2P55001 183 aa11.92□□□□□ -0.5
GINS3-203ENST00000426538 ECSCRQ19T08 205 aa11.92□□□□□ -0.5
GINS3-203ENST00000426538 ASPHD1Q5U4P2 390 aa11.92□□□□□ -0.5
GINS3-203ENST00000426538 TMEM144Q7Z5S9 345 aa11.92□□□□□ -0.5
GINS3-203ENST00000426538 OR5T1Q8NG75 326 aa11.92□□□□□ -0.5
GINS3-203ENST00000426538 OR2T6Q8NHC8 308 aa11.92□□□□□ -0.5
GINS3-203ENST00000426538 SAT2Q96F10 170 aaPredicted RBP11.92□□□□□ -0.5
GINS3-203ENST00000426538 ZNF48Q96MX3 618 aaPredicted RBP11.92□□□□□ -0.5
GINS3-203ENST00000426538 PRDM13Q9H4Q3 707 aa11.92□□□□□ -0.5
GINS3-203ENST00000426538 CAMLGP49069 296 aa11.91□□□□□ -0.5
GINS3-203ENST00000426538 BLOC1S1P78537 153 aa11.91□□□□□ -0.5
GINS3-203ENST00000426538 AKIRIN2Q53H80 203 aa11.91□□□□□ -0.5
GINS3-203ENST00000426538 CENPVQ7Z7K6 275 aaPredicted RBP11.91□□□□□ -0.5
GINS3-203ENST00000426538 ACY3Q96HD9 319 aa11.91□□□□□ -0.5
GINS3-203ENST00000426538 FNDC4Q9H6D8 234 aaPredicted RBP11.91□□□□□ -0.5
GINS3-203ENST00000426538 PLA2G2EQ9NZK7 142 aa11.91□□□□□ -0.5
GINS3-203ENST00000426538 THYN1Q9P016 225 aa11.91□□□□□ -0.5
GINS3-203ENST00000426538 VPREB3Q9UKI3 123 aa11.91□□□□□ -0.5
GINS3-203ENST00000426538 MYO9AB2RTY4 2548 aa11.91□□□□□ -0.5
GINS3-203ENST00000426538 LINC01548A6NM66 108 aa11.91□□□□□ -0.5
GINS3-203ENST00000426538 HOXA3O43365 443 aaPredicted RBP11.91□□□□□ -0.5
GINS3-203ENST00000426538 MT-CO2P00403 227 aa11.91□□□□□ -0.5
GINS3-203ENST00000426538 RBMS3Q6XE24 437 aaKnown RBP11.91□□□□□ -0.5
GINS3-203ENST00000426538 SLC35E3Q7Z769 313 aa11.91□□□□□ -0.5
GINS3-203ENST00000426538 LSM4Q9Y4Z0 139 aaKnown RBP11.91□□□□□ -0.5
GINS3-203ENST00000426538 AGPAT2O15120 278 aa11.9□□□□□ -0.5
GINS3-203ENST00000426538 SOX15O60248 233 aa11.9□□□□□ -0.5
GINS3-203ENST00000426538 IGHV3-48P01763 117 aa11.9□□□□□ -0.5
GINS3-203ENST00000426538 IGHG2P01859 326 aa11.9□□□□□ -0.5
GINS3-203ENST00000426538 BLCAPP62952 87 aa11.9□□□□□ -0.5
GINS3-203ENST00000426538 SCGB2A2Q13296 93 aa11.9□□□□□ -0.5
GINS3-203ENST00000426538 NPIPB3Q92617 1050 aa11.9□□□□□ -0.5
GINS3-203ENST00000426538 MGST2Q99735 147 aa11.9□□□□□ -0.5
GINS3-203ENST00000426538 KCNIP2Q9NS61 270 aa11.9□□□□□ -0.5
GINS3-203ENST00000426538 DMRT1Q9Y5R6 373 aa11.9□□□□□ -0.5
GINS3-203ENST00000426538 IGHV3-21A0A0B4J1V1 117 aa11.89□□□□□ -0.51
GINS3-203ENST00000426538 MBP02144 154 aa11.89□□□□□ -0.51
GINS3-203ENST00000426538 FFAR4Q5NUL3 377 aa11.89□□□□□ -0.51
GINS3-203ENST00000426538 SLC7A5P1Q8MH63 180 aa11.89□□□□□ -0.51
GINS3-203ENST00000426538 SIGLECL1Q8N7X8 197 aa11.89□□□□□ -0.51
GINS3-203ENST00000426538 FAM110DQ8TAY7 271 aaPredicted RBP11.89□□□□□ -0.51
GINS3-203ENST00000426538 FAM213BQ8TBF2 198 aa11.89□□□□□ -0.51
GINS3-203ENST00000426538 ZNF355PQ9NSJ1 428 aa11.89□□□□□ -0.51
GINS3-203ENST00000426538 PFDN2Q9UHV9 154 aa11.89□□□□□ -0.51
GINS3-203ENST00000426538 TLN2Q9Y4G6 2542 aa11.89□□□□□ -0.51
GINS3-203ENST00000426538 TRAV41A0A0B4J266 112 aa11.89□□□□□ -0.51
GINS3-203ENST00000426538 LINC00862A6NCI5 91 aa11.89□□□□□ -0.51
GINS3-203ENST00000426538 HIST1H1BP16401 226 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms