RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 AP3S2P59780 193 aa13.51□□□□□ -0.25
IGHV3-47-201ENST00000425060 TM4SF20Q53R12 229 aa13.51□□□□□ -0.25
IGHV3-47-201ENST00000425060 SPSB3Q6PJ21 355 aa13.51□□□□□ -0.25
IGHV3-47-201ENST00000425060 SBSPONQ8IVN8 264 aa13.51□□□□□ -0.25
IGHV3-47-201ENST00000425060 SGPP2Q8IWX5 399 aa13.51□□□□□ -0.25
IGHV3-47-201ENST00000425060 GPR146Q96CH1 333 aa13.51□□□□□ -0.25
IGHV3-47-201ENST00000425060 KCNIP3Q9Y2W7 256 aa13.51□□□□□ -0.25
IGHV3-47-201ENST00000425060 IFNA17P01571 189 aa13.5□□□□□ -0.25
IGHV3-47-201ENST00000425060 IGHV4-30-4P0DP06 118 aa13.5□□□□□ -0.25
IGHV3-47-201ENST00000425060 FAUP35544 74 aaKnown RBP13.5□□□□□ -0.25
IGHV3-47-201ENST00000425060 TMEM268Q5VZI3 342 aa13.5□□□□□ -0.25
IGHV3-47-201ENST00000425060 SLC35G3Q8N808 338 aa13.5□□□□□ -0.25
IGHV3-47-201ENST00000425060 UXS1Q8NBZ7 420 aa13.5□□□□□ -0.25
IGHV3-47-201ENST00000425060 OR52E5Q8NH55 327 aa13.5□□□□□ -0.25
IGHV3-47-201ENST00000425060 TMEM190Q8WZ59 177 aa13.5□□□□□ -0.25
IGHV3-47-201ENST00000425060 IL22RA2Q969J5 263 aa13.5□□□□□ -0.25
IGHV3-47-201ENST00000425060 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.5□□□□□ -0.25
IGHV3-47-201ENST00000425060 MLXQ9UH92 298 aa13.5□□□□□ -0.25
IGHV3-47-201ENST00000425060 MT-CO2P00403 227 aa13.49□□□□□ -0.25
IGHV3-47-201ENST00000425060 RNASE2P10153 161 aaKnown RBP13.49□□□□□ -0.25
IGHV3-47-201ENST00000425060 SPCS3P61009 180 aa13.49□□□□□ -0.25
IGHV3-47-201ENST00000425060 BSXQ3C1V8 233 aa13.49□□□□□ -0.25
IGHV3-47-201ENST00000425060 SPANXN2Q5MJ10 180 aa13.49□□□□□ -0.25
IGHV3-47-201ENST00000425060 RNASE11Q8TAA1 199 aaKnown RBP13.49□□□□□ -0.25
IGHV3-47-201ENST00000425060 DYNLRB2Q8TF09 96 aa13.49□□□□□ -0.25
IGHV3-47-201ENST00000425060 MISP3Q96FF7 219 aa13.49□□□□□ -0.25
IGHV3-47-201ENST00000425060 TXN2Q99757 166 aa13.49□□□□□ -0.25
IGHV3-47-201ENST00000425060 PALMDQ9NP74 551 aa13.49□□□□□ -0.25
IGHV3-47-201ENST00000425060 PRR13Q9NZ81 148 aa13.49□□□□□ -0.25
IGHV3-47-201ENST00000425060 NDUFA13Q9P0J0 144 aa13.49□□□□□ -0.25
IGHV3-47-201ENST00000425060 MRPL27Q9P0M9 148 aaKnown RBP13.49□□□□□ -0.25
IGHV3-47-201ENST00000425060 NDUFA4O00483 81 aa13.48□□□□□ -0.25
IGHV3-47-201ENST00000425060 AKR1C4P17516 323 aa13.48□□□□□ -0.25
IGHV3-47-201ENST00000425060 SNCAP37840 140 aa13.48□□□□□ -0.25
IGHV3-47-201ENST00000425060 MFAP4P55083 255 aa13.48□□□□□ -0.25
IGHV3-47-201ENST00000425060 BAK1Q16611 211 aa13.48□□□□□ -0.25
IGHV3-47-201ENST00000425060 Q56UQ5 140 aa13.48□□□□□ -0.25
IGHV3-47-201ENST00000425060 MARC2Q969Z3 335 aa13.48□□□□□ -0.25
IGHV3-47-201ENST00000425060 SDHCQ99643 169 aaPredicted RBP13.48□□□□□ -0.25
IGHV3-47-201ENST00000425060 PDCD10Q9BUL8 212 aa13.48□□□□□ -0.25
IGHV3-47-201ENST00000425060 GAR1Q9NY12 217 aaKnown RBP13.48□□□□□ -0.25
IGHV3-47-201ENST00000425060 CACNG5Q9UF02 275 aa13.48□□□□□ -0.25
IGHV3-47-201ENST00000425060 UFC1Q9Y3C8 167 aa13.48□□□□□ -0.25
IGHV3-47-201ENST00000425060 TMEM61Q8N0U2 210 aa13.47□□□□□ -0.25
IGHV3-47-201ENST00000425060 UBAC2Q8NBM4 344 aa13.47□□□□□ -0.25
IGHV3-47-201ENST00000425060 WDR89Q96FK6 387 aaPredicted RBP13.47□□□□□ -0.25
IGHV3-47-201ENST00000425060 U3KQK5 164 aa13.47□□□□□ -0.25
IGHV3-47-201ENST00000425060 A0A0B4J2A0 478 aa13.46□□□□□ -0.25
IGHV3-47-201ENST00000425060 K7EMT4 169 aa13.46□□□□□ -0.25
IGHV3-47-201ENST00000425060 IGHV3-48P01763 117 aa13.46□□□□□ -0.25
IGHV3-47-201ENST00000425060 HOXA1P49639 335 aaPredicted RBP13.46□□□□□ -0.25
IGHV3-47-201ENST00000425060 TMEM128Q5BJH2 165 aa13.46□□□□□ -0.25
IGHV3-47-201ENST00000425060 NMSQ5H8A3 153 aa13.46□□□□□ -0.25
IGHV3-47-201ENST00000425060 ZNF57Q68EA5 555 aaPredicted RBP13.46□□□□□ -0.25
IGHV3-47-201ENST00000425060 GTSCR1Q86UQ5 136 aa13.46□□□□□ -0.25
IGHV3-47-201ENST00000425060 PINX1Q96BK5 328 aaKnown RBP13.46□□□□□ -0.25
IGHV3-47-201ENST00000425060 SLC25A21Q9BQT8 299 aaPredicted RBP13.46□□□□□ -0.25
IGHV3-47-201ENST00000425060 SHPKQ9UHJ6 478 aa13.46□□□□□ -0.25
IGHV3-47-201ENST00000425060 SELENOKQ9Y6D0 94 aa13.46□□□□□ -0.25
IGHV3-47-201ENST00000425060 CD7P09564 240 aa13.45□□□□□ -0.26
IGHV3-47-201ENST00000425060 SUB1P53999 127 aaKnown RBP eCLIP13.45□□□□□ -0.26
IGHV3-47-201ENST00000425060 BTNL8Q6UX41 500 aa13.45□□□□□ -0.26
IGHV3-47-201ENST00000425060 LYZL2Q7Z4W2 148 aa13.45□□□□□ -0.26
IGHV3-47-201ENST00000425060 NEURL2Q9BR09 285 aa13.45□□□□□ -0.26
IGHV3-47-201ENST00000425060 FNDC4Q9H6D8 234 aaPredicted RBP13.45□□□□□ -0.26
IGHV3-47-201ENST00000425060 ENY2Q9NPA8 101 aa13.45□□□□□ -0.26
IGHV3-47-201ENST00000425060 DAZ1Q9NQZ3 744 aaKnown RBP13.45□□□□□ -0.26
IGHV3-47-201ENST00000425060 TRAV25A0A0B4J276 109 aa13.44□□□□□ -0.26
IGHV3-47-201ENST00000425060 CORTO00230 105 aa13.44□□□□□ -0.26
IGHV3-47-201ENST00000425060 NUPL2O15504 423 aaKnown RBP13.44□□□□□ -0.26
IGHV3-47-201ENST00000425060 SULT1A3P0DMM9 295 aa13.44□□□□□ -0.26
IGHV3-47-201ENST00000425060 SULT1A4P0DMN0 295 aa13.44□□□□□ -0.26
IGHV3-47-201ENST00000425060 CD81P60033 236 aa13.44□□□□□ -0.26
IGHV3-47-201ENST00000425060 GUCA2BQ16661 112 aa13.44□□□□□ -0.26
IGHV3-47-201ENST00000425060 LINC00322Q6ZN03 302 aaPredicted RBP13.44□□□□□ -0.26
IGHV3-47-201ENST00000425060 LGI3Q8N145 548 aa13.44□□□□□ -0.26
IGHV3-47-201ENST00000425060 MRPL36Q9P0J6 103 aaKnown RBP13.44□□□□□ -0.26
IGHV3-47-201ENST00000425060 IGHV3OR16-8A0A075B7F1 116 aa13.43□□□□□ -0.26
IGHV3-47-201ENST00000425060 C15orf62A8K5M9 175 aa13.43□□□□□ -0.26
IGHV3-47-201ENST00000425060 ANXA3P12429 323 aa13.43□□□□□ -0.26
IGHV3-47-201ENST00000425060 CCR6P51684 374 aa13.43□□□□□ -0.26
IGHV3-47-201ENST00000425060 SRPXP78539 464 aa13.43□□□□□ -0.26
IGHV3-47-201ENST00000425060 RELQ04864 619 aaPredicted RBP13.43□□□□□ -0.26
IGHV3-47-201ENST00000425060 MLANAQ16655 118 aa13.43□□□□□ -0.26
IGHV3-47-201ENST00000425060 TMED4Q7Z7H5 227 aa13.43□□□□□ -0.26
IGHV3-47-201ENST00000425060 LRTM2Q8N967 370 aa13.43□□□□□ -0.26
IGHV3-47-201ENST00000425060 DUSP18Q8NEJ0 188 aa13.43□□□□□ -0.26
IGHV3-47-201ENST00000425060 TMEM170AQ8WVE7 144 aa13.43□□□□□ -0.26
IGHV3-47-201ENST00000425060 OR10C1Q96KK4 312 aa13.43□□□□□ -0.26
IGHV3-47-201ENST00000425060 WWC2-AS2Q96NR7 200 aa13.43□□□□□ -0.26
IGHV3-47-201ENST00000425060 TM2D3Q9BRN9 247 aa13.43□□□□□ -0.26
IGHV3-47-201ENST00000425060 GNG7O60262 68 aa13.42□□□□□ -0.26
IGHV3-47-201ENST00000425060 TMEM50AO95807 157 aa13.42□□□□□ -0.26
IGHV3-47-201ENST00000425060 HTR2BP41595 481 aa13.42□□□□□ -0.26
IGHV3-47-201ENST00000425060 NPBWR1P48145 328 aa13.42□□□□□ -0.26
IGHV3-47-201ENST00000425060 ANKRD55Q3KP44 614 aa13.42□□□□□ -0.26
IGHV3-47-201ENST00000425060 C2orf83Q53S99 150 aa13.42□□□□□ -0.26
IGHV3-47-201ENST00000425060 C20orf24Q9BUV8 137 aa13.42□□□□□ -0.26
IGHV3-47-201ENST00000425060 CACFD1Q9UGQ2 172 aa13.42□□□□□ -0.26
IGHV3-47-201ENST00000425060 DUXBA0A1W2PPF3 345 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms