RNA–Protein interactions for RNA: ENST00000416690.5

GTF3C3-203, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 326 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-203ENST00000416690 NIPAL2Q9H841 368 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 WDR76Q9H967 626 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 ROPN1Q9HAT0 212 aaPredicted RBP0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 SIAEQ9HAT2 523 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 RNPEPL1Q9HAU8 725 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 GRPEL1Q9HAV7 217 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 C12orf10Q9HB07 376 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 CACYBPQ9HB71 228 aaKnown RBP0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 TMEM27Q9HBJ8 222 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 NMRAL1Q9HBL8 299 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 ZNF286AQ9HBT8 521 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 MID1IP1Q9NPA3 183 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 LZTFL1Q9NQ48 299 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 RPRD1BQ9NQG5 326 aaKnown RBP0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 DAZ1Q9NQZ3 744 aaKnown RBP0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 PARP11Q9NR21 331 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 POLE4Q9NR33 117 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 POLE3Q9NRF9 147 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 TUBG2Q9NRH3 451 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 SLC2A9Q9NRM0 540 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 UBQLN4Q9NRR5 601 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 INIPQ9NRY2 104 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 SLC35D1Q9NTN3 355 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 ZCCHC3Q9NUD5 404 aaKnown RBP0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 TMEM100Q9NV29 134 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 TMEM38BQ9NVV0 291 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 MRPL22Q9NWU5 206 aaKnown RBP0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 C1orf123Q9NWV4 160 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 NMRK1Q9NWW6 199 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 GIN1Q9NXP7 522 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 BABAM2Q9NXR7 383 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 SMPD3Q9NY59 655 aaPredicted RBP0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 RASL12Q9NYN1 266 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 TAS2R5Q9NYW4 299 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 TAS2R3Q9NYW6 316 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 TVP23BQ9NYZ1 205 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 IDI2-AS1Q9NZ38 188 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 CNOT2Q9NZN8 540 aaKnown RBP0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 CALML5Q9NZT1 146 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 MRPL27Q9P0M9 148 aaKnown RBP0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 IFNKQ9P0W0 207 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 STX18Q9P2W9 335 aaKnown RBP0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 XCL2Q9UBD3 114 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 GNG12Q9UBI6 72 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 OPTCQ9UBM4 332 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 VPS29Q9UBQ0 182 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 PEF1Q9UBV8 284 aaKnown RBP0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 CLEC2DQ9UHP7 191 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 RABAC1Q9UI14 185 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 PSORS1C2Q9UIG4 136 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 ATPIF1Q9UII2 106 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 ENPP5Q9UJA9 477 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 PCTPQ9UKL6 214 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 CES1P1Q9UKY3 287 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 CFAP45Q9UL16 551 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 TBC1D24Q9ULP9 559 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 HHLA2Q9UM44 414 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 SNX6Q9UNH7 406 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 ING4Q9UNL4 249 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 SLC7A11Q9UPY5 501 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 CHMP2BQ9UQN3 213 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 SLC22A13Q9Y226 551 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 ANGPT4Q9Y264 503 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 ERGIC3Q9Y282 383 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 SIGLEC7Q9Y286 467 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 STK38LQ9Y2H1 464 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 GSTK1Q9Y2Q3 226 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 POLDIP2Q9Y2S7 368 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 AP3M1Q9Y2T2 418 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 UBE2D4Q9Y2X8 147 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 ACOT9Q9Y305 439 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 STARD10Q9Y365 291 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 WASHC3Q9Y3C0 194 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 RNF11Q9Y3C5 154 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 MRPS16Q9Y3D3 137 aaKnown RBP0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 FIS1Q9Y3D6 152 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 LINC00588Q9Y4M8 146 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 POLR3HQ9Y535 204 aaPredicted RBP0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 ATP6V1DQ9Y5K8 247 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 N6AMT1Q9Y5N5 214 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 SNX5Q9Y5X3 404 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 NUBP2Q9Y5Y2 271 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 PUS1Q9Y606 427 aaKnown RBP eCLIP0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 LHFPL6Q9Y693 200 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 BZW2Q9Y6E2 419 aaKnown RBP0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 ICOSQ9Y6W8 199 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 LY96Q9Y6Y9 160 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 U3KQV3 271 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 V9GYQ6 96 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 HERC2O95714 4834 aa0.09□□□□□ -2.4
GTF3C3-203ENST00000416690 IGKV1D-42A0A075B6H8 117 aa0.08□□□□□ -2.4
GTF3C3-203ENST00000416690 IGLV10-54A0A075B6I4 117 aa0.08□□□□□ -2.4
GTF3C3-203ENST00000416690 IGHV3-64A0A075B6Q5 118 aa0.08□□□□□ -2.4
GTF3C3-203ENST00000416690 TRGV2A0A075B6R0 118 aa0.08□□□□□ -2.4
GTF3C3-203ENST00000416690 IGKV1-27A0A075B6S5 117 aa0.08□□□□□ -2.4
GTF3C3-203ENST00000416690 TRAV12-2A0A075B6T6 113 aa0.08□□□□□ -2.4
GTF3C3-203ENST00000416690 TRAV6A0A075B6T7 132 aa0.08□□□□□ -2.4
GTF3C3-203ENST00000416690 IGKV1OR2-108A0A075B7D4 117 aa0.08□□□□□ -2.4
GTF3C3-203ENST00000416690 MEIKINA0A087WXM9 373 aa0.08□□□□□ -2.4
GTF3C3-203ENST00000416690 A0A096LNI7 61 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms