RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 ARL6IP6Q8N6S5 226 aa13.02□□□□□ -0.33
PHRF1-203ENST00000416188 MRPL20Q9BYC9 149 aaKnown RBP13.02□□□□□ -0.33
PHRF1-203ENST00000416188 PLXNA3P51805 1871 aa13.02□□□□□ -0.33
PHRF1-203ENST00000416188 STAG3L2P0CL84 134 aa13.02□□□□□ -0.33
PHRF1-203ENST00000416188 HERPUD1Q15011 391 aa13.02□□□□□ -0.33
PHRF1-203ENST00000416188 RAB37Q96AX2 223 aa13.02□□□□□ -0.33
PHRF1-203ENST00000416188 DUX5Q96PT3 197 aa13.02□□□□□ -0.33
PHRF1-203ENST00000416188 FOXA2Q9Y261 457 aaPredicted RBP13.02□□□□□ -0.33
PHRF1-203ENST00000416188 UBE2L6O14933 153 aa13.02□□□□□ -0.33
PHRF1-203ENST00000416188 BTCP35070 178 aa13.02□□□□□ -0.33
PHRF1-203ENST00000416188 CLDND2Q8NHS1 167 aa13.02□□□□□ -0.33
PHRF1-203ENST00000416188 SLC25A28Q96A46 364 aa13.02□□□□□ -0.33
PHRF1-203ENST00000416188 GPR82Q96P67 336 aa13.02□□□□□ -0.33
PHRF1-203ENST00000416188 ZNF319Q9P2F9 582 aa13.02□□□□□ -0.33
PHRF1-203ENST00000416188 NOTCH3Q9UM47 2321 aa13.01□□□□□ -0.33
PHRF1-203ENST00000416188 LOC107984156A0A0G2JMH3 177 aa13.01□□□□□ -0.33
PHRF1-203ENST00000416188 RNF222A6NCQ9 220 aa13.01□□□□□ -0.33
PHRF1-203ENST00000416188 SRD5A1P18405 259 aa13.01□□□□□ -0.33
PHRF1-203ENST00000416188 ARL17AQ8IVW1 177 aa13.01□□□□□ -0.33
PHRF1-203ENST00000416188 ATOH7Q8N100 152 aa13.01□□□□□ -0.33
PHRF1-203ENST00000416188 C11orf44Q8N8P7 122 aa13.01□□□□□ -0.33
PHRF1-203ENST00000416188 GATA2P23769 480 aaPredicted RBP13.01□□□□□ -0.33
PHRF1-203ENST00000416188 CDX1P47902 265 aaPredicted RBP13.01□□□□□ -0.33
PHRF1-203ENST00000416188 RPRMLQ8N4K4 120 aa13.01□□□□□ -0.33
PHRF1-203ENST00000416188 PKDREJQ9NTG1 2253 aa13.01□□□□□ -0.33
PHRF1-203ENST00000416188 WNK2Q9Y3S1 2297 aa13.01□□□□□ -0.33
PHRF1-203ENST00000416188 A0A0G2JLM5 398 aa13.01□□□□□ -0.33
PHRF1-203ENST00000416188 A6NNC1 897 aa13.01□□□□□ -0.33
PHRF1-203ENST00000416188 RNF223E7ERA6 249 aa13.01□□□□□ -0.33
PHRF1-203ENST00000416188 SOD3P08294 240 aa13.01□□□□□ -0.33
PHRF1-203ENST00000416188 FOLR2P14207 255 aa13.01□□□□□ -0.33
PHRF1-203ENST00000416188 WDR82Q6UXN9 313 aa13.01□□□□□ -0.33
PHRF1-203ENST00000416188 OR10AG1Q8NH19 301 aa13.01□□□□□ -0.33
PHRF1-203ENST00000416188 FBXL7Q9UJT9 491 aa13.01□□□□□ -0.33
PHRF1-203ENST00000416188 CREBBPQ92793 2442 aa13.01□□□□□ -0.33
PHRF1-203ENST00000416188 IGKV1D-13A0A0B4J2D9 117 aa13□□□□□ -0.33
PHRF1-203ENST00000416188 IGKV1-13P0DP09 117 aa13□□□□□ -0.33
PHRF1-203ENST00000416188 DLX6P56179 175 aa13□□□□□ -0.33
PHRF1-203ENST00000416188 ZNF436-AS1Q8NC38 126 aaPredicted RBP13□□□□□ -0.33
PHRF1-203ENST00000416188 LYZL4Q96KX0 146 aa13□□□□□ -0.33
PHRF1-203ENST00000416188 CRYGSP22914 178 aa13□□□□□ -0.33
PHRF1-203ENST00000416188 GAS1P54826 345 aa13□□□□□ -0.33
PHRF1-203ENST00000416188 OR10S1Q8NGN2 331 aa13□□□□□ -0.33
PHRF1-203ENST00000416188 NOTCH4Q99466 2003 aa13□□□□□ -0.33
PHRF1-203ENST00000416188 PCNX1Q96RV3 2341 aa13□□□□□ -0.33
PHRF1-203ENST00000416188 SLC17A3O00476 420 aa13□□□□□ -0.33
PHRF1-203ENST00000416188 TFF1P04155 84 aa13□□□□□ -0.33
PHRF1-203ENST00000416188 GPX4P36969 197 aaPredicted RBP13□□□□□ -0.33
PHRF1-203ENST00000416188 B3GALT5-AS1P59052 145 aa13□□□□□ -0.33
PHRF1-203ENST00000416188 SAPCD1Q5SSQ6 148 aa13□□□□□ -0.33
PHRF1-203ENST00000416188 TSPOP30536 169 aa13□□□□□ -0.33
PHRF1-203ENST00000416188 SNRPD3P62318 126 aaKnown RBP13□□□□□ -0.33
PHRF1-203ENST00000416188 ZNF56Q15929 161 aa13□□□□□ -0.33
PHRF1-203ENST00000416188 C8orf46Q8TAG6 207 aa13□□□□□ -0.33
PHRF1-203ENST00000416188 FREM3P0C091 2139 aa13□□□□□ -0.33
PHRF1-203ENST00000416188 FAM181BA6NEQ2 426 aa12.99□□□□□ -0.33
PHRF1-203ENST00000416188 SIAH2O43255 324 aa12.99□□□□□ -0.33
PHRF1-203ENST00000416188 EFNB1P98172 346 aa12.99□□□□□ -0.33
PHRF1-203ENST00000416188 FAM159AQ6UWV7 190 aa12.99□□□□□ -0.33
PHRF1-203ENST00000416188 TRAV14DV4A0A0A6YYC5 116 aa12.99□□□□□ -0.33
PHRF1-203ENST00000416188 DPRXA6NFQ7 191 aa12.99□□□□□ -0.33
PHRF1-203ENST00000416188 GGACTQ9BVM4 153 aa12.99□□□□□ -0.33
PHRF1-203ENST00000416188 UQCR10Q9UDW1 63 aa12.99□□□□□ -0.33
PHRF1-203ENST00000416188 TRBV20OR9-2A0A075B6H5 130 aa12.99□□□□□ -0.33
PHRF1-203ENST00000416188 HLA-DRB1P01911 266 aa12.99□□□□□ -0.33
PHRF1-203ENST00000416188 PRSS8Q16651 343 aa12.99□□□□□ -0.33
PHRF1-203ENST00000416188 PPP1R27Q86WC6 154 aa12.99□□□□□ -0.33
PHRF1-203ENST00000416188 C21orf62Q9NYP8 219 aa12.99□□□□□ -0.33
PHRF1-203ENST00000416188 TRBV6-7A0A0A0MS04 114 aa12.99□□□□□ -0.33
PHRF1-203ENST00000416188 C9JCJ5 164 aa12.99□□□□□ -0.33
PHRF1-203ENST00000416188 VENTXO95231 258 aa12.99□□□□□ -0.33
PHRF1-203ENST00000416188 GPR183P32249 361 aa12.99□□□□□ -0.33
PHRF1-203ENST00000416188 BIVMQ86UB2 503 aa12.99□□□□□ -0.33
PHRF1-203ENST00000416188 NEUROG1Q92886 237 aa12.99□□□□□ -0.33
PHRF1-203ENST00000416188 TMEM238LA0A1B0GVL6 79 aa12.98□□□□□ -0.33
PHRF1-203ENST00000416188 A6NJY4 79 aa12.98□□□□□ -0.33
PHRF1-203ENST00000416188 SLC25A34Q6PIV7 304 aa12.98□□□□□ -0.33
PHRF1-203ENST00000416188 C7orf71A4D174 169 aa12.98□□□□□ -0.33
PHRF1-203ENST00000416188 ATP5G3P48201 142 aa12.98□□□□□ -0.33
PHRF1-203ENST00000416188 HBBP68871 147 aa12.98□□□□□ -0.33
PHRF1-203ENST00000416188 OR4D5Q8NGN0 318 aa12.98□□□□□ -0.33
PHRF1-203ENST00000416188 TRAV24A0A0B4J272 114 aa12.98□□□□□ -0.33
PHRF1-203ENST00000416188 MUC21A0A0G2JKD1 596 aa12.98□□□□□ -0.33
PHRF1-203ENST00000416188 MUC21A0A140T8X8 626 aa12.98□□□□□ -0.33
PHRF1-203ENST00000416188 MUC21Q5SSG8 566 aa12.98□□□□□ -0.33
PHRF1-203ENST00000416188 C12orf54Q6X4T0 127 aa12.98□□□□□ -0.33
PHRF1-203ENST00000416188 ZNF525Q8N782 197 aa12.98□□□□□ -0.33
PHRF1-203ENST00000416188 IGKV3OR2-268A0A0C4DH90 116 aa12.98□□□□□ -0.33
PHRF1-203ENST00000416188 SCO2A0A1W2PP80 73 aa12.98□□□□□ -0.33
PHRF1-203ENST00000416188 RBFOX2O43251 390 aaKnown RBP eCLIP12.98□□□□□ -0.332e-6■■■□□ 17.5
PHRF1-203ENST00000416188 HIST1H4GQ99525 98 aa12.98□□□□□ -0.33
PHRF1-203ENST00000416188 KIAA1671Q9BY89 1806 aa12.98□□□□□ -0.33
PHRF1-203ENST00000416188 LY6HO94772 140 aa12.97□□□□□ -0.33
PHRF1-203ENST00000416188 SRP19P09132 144 aaKnown RBP12.97□□□□□ -0.33
PHRF1-203ENST00000416188 TMEM133Q9H2Q1 129 aa12.97□□□□□ -0.33
PHRF1-203ENST00000416188 DMRT1Q9Y5R6 373 aa12.97□□□□□ -0.33
PHRF1-203ENST00000416188 A0A1B0GV90 55 aa12.97□□□□□ -0.33
PHRF1-203ENST00000416188 NSUN5P1Q3KNT7 163 aa12.97□□□□□ -0.33
PHRF1-203ENST00000416188 OR52E5Q8NH55 327 aa12.97□□□□□ -0.33
PHRF1-203ENST00000416188 KCNS1Q96KK3 526 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms